Parus major (Great Tit): 107198363
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Entry
107198363 CDS
T04864
Symbol
ZCCHC7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107198363 (ZCCHC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107198363 (ZCCHC7)
03016 Transfer RNA biogenesis [BR:
pmaj03016
]
107198363 (ZCCHC7)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
107198363 (ZCCHC7)
Transfer RNA biogenesis [BR:
pmaj03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
107198363 (ZCCHC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
zf-CCHC_3
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
107198363
NCBI-ProteinID:
XP_015470807
Ensembl:
ENSPMJG00000001596
LinkDB
All DBs
Position
Z:complement(74135229..74222092)
Genome browser
AA seq
583 aa
AA seq
DB search
MDQNSGSPLSRMFTGYGDPENTEVYEDELYPEESSSEQSVDSEVEFHLYSQIHYSHDLGE
SSTVEMDEEADVGEVMGQSSGLTEKQEEDEKLTEDATQLSDEPEVIVLSDTPDEDSIYKS
KAKRSRCSSAKGKTHIHPVSSTPNHTKAARCKAPCPPESGVATPRQRNSSSGRPTPVCSA
GPGAIQEVLVIDNSSEEEESFISDTDNVESWMLLGAGADDTDGDIMLNLEGYATPVSEGE
IDVDWSISHKDLEAQISNYAGVRHSGMRYYSADKNITCRNCDRPGHLSKNCPTPKKVPPC
CLCAGRDHLQHSCPARFCLNCCLPGHYFKECLERAYWNKHCNRCDMKGHYADACPEIWRQ
YHLTTKPGPIKAAGSHSERSLSVYCYNCSRKGHLGYECSEKRMRGNMFPTSPFIYYYDDE
CDIKRRANRLKRKVADLQEAGLLPEQSETPLQEEQLEVPSHKKKSKLWKEQGKKSRNSEQ
LKKMKVSQAKKSQQEKHRRGVEIHCEPEDFPRGYKQKGCKGSRVCHKSLFQAFSGSKAMC
VQQPREGAKKKKKWKKQKNAGPDSRDNLFLIKQKKKKSKQKSW
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaactcaggctctccactttccagaatgtttactgggtatggagatcctgag
aatactgaagtgtatgaagatgaactttatcctgaggagtcatccagtgagcagagtgtt
gatagtgaggtggagtttcatctctatagccagatccactattcccatgatcttggagaa
agcagtacagtggaaatggatgaagaagctgatgttggagaagtcatgggtcaaagttca
ggtctcactgagaaacaggaggaagatgagaaactcactgaagatgctactcagctttca
gatgagcctgaggtcattgtcctgtccgatacaccagatgaagacagcatctacaaaagc
aaggccaagaggtcaagatgctcttcagctaaaggtaaaacacacatccacccagtatct
tctacaccaaatcacaccaaagctgccagatgtaaagccccgtgtccccctgagtctggt
gtggccacaccaaggcagagaaacagcagtagtgggaggcccaccccagtctgttctgct
ggacctggagccatccaggaagtgttggtgatagacaacagctcagaggaggaggagagc
ttcatctctgacactgataacgtcgaaagctggatgctcctgggagctggtgctgatgac
acggatggagacatcatgttgaacctcgagggctatgccacccctgtcagcgaaggagaa
attgatgtggactggtccatctctcataaagacttagaggcacagatctccaactatgcg
ggcgtgaggcacagcggcatgcgctactactcagctgacaaaaacattacttgtaggaac
tgcgacagaccagggcatttgtccaagaactgtcccactccaaagaaagttcccccgtgc
tgtctgtgtgcgggaagagaccatctgcagcacagctgcccagcacggttctgtctgaac
tgctgcttgcccgggcactatttcaaggaatgcctggagagagcctattggaacaagcac
tgcaaccgctgcgacatgaagggccactatgctgatgcttgcccagaaatatggaggcag
tatcacctaacaacaaagccaggacccatcaaggcagctggttcccactcggagcgctcg
ctgtccgtgtactgctacaactgctcccgcaagggacacctgggatatgagtgctcagag
aagcggatgcggggaaacatgttccccacttctcccttcatctactactacgacgatgaa
tgcgacatcaagaggagagccaacaggttaaaaagaaaggtggcagacctgcaggaagct
ggccttctgccagagcagtctgaaacaccgttgcaggaagaacagcttgaggtacccagc
cacaagaaaaagagcaaactttggaaagaacaggggaagaaaagcaggaacagtgagcag
ctgaagaagatgaaggtgtcccaggcaaagaaatcccagcaggagaagcacaggaggggt
gtggagatccactgtgagccagaggacttccctcgggggtacaagcagaaggggtgcaag
ggcagcagggtctgccacaagtcccttttccaggcattctcaggcagcaaggccatgtgt
gtgcagcagcctcgagaaggtgccaaaaagaagaagaaatggaaaaagcagaaaaatgct
ggtcctgacagcagggacaatctattccttataaagcagaaaaagaagaagtccaaacag
aaatcctggtga
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