Parus major (Great Tit): 107198373
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Entry
107198373 CDS
T04864
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107198373 (TRIM71)
04121 Ubiquitin system [BR:
pmaj04121
]
107198373 (TRIM71)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107198373 (TRIM71)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107198373 (TRIM71)
Ubiquitin system [BR:
pmaj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107198373 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
TEN_NHL
Vgb_lyase
DUF4094
Motif
Other DBs
NCBI-GeneID:
107198373
NCBI-ProteinID:
XP_015470837
LinkDB
All DBs
Position
2:complement(41202077..41216953)
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AA seq
566 aa
AA seq
DB search
MGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAVAEQVEMKAKVVQS
EVKVVTTRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLDNTISAVQQVL
EEGRTMDILLARDRMLAQVQELKNVRGLLQPQEDDRIMFTPPDQALYMAIKSMGFVSSGA
FAPLTKATGEGLKRALQGKVASFTVMGYDHDGEPRLSGGDMISAVVMGPDGNLFGADVSD
QQNGTYLVSYRPQLEGEHLVSVMMCNQHIENSPFKVVVKSGRSYIGIGLPGLSFGSEGDS
DGKLCRPWGVSVDKEGFIIVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACD
SSRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYPWDVAVNAEGKILVSDTRNH
RVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRLLVIHPDCQSAR
FLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFLCKFGTQGSGFGQMD
RPSGIAVTPDGMIVVVDFGNNRILVF
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgggacgacatgtgggtcacagctttatctacctccaagacgccctacaggactccagg
actctcaccattcagctcctggcagatgctcagcaaggacgacaggctattcaactgagt
attgaacaggcccaggctgtggcagagcaagtcgagatgaaagcgaaggtggtacagtct
gaagtcaaagtagtgaccactagacataagaaggccttggaggagcgggagtgtgagctg
ctctggaaggtggaaaagattcgccaagtcaaggccaagtcactctacttgcaagttgaa
aagttgcgtcagaacctgaacaagctggataacaccattagtgctgtccagcaggtcctg
gaggagggtcgtaccatggatattcttctggctcgggaccgcatgctggctcaggtgcag
gagctgaagaacgtcagaggccttctccagccacaggaagacgacaggatcatgttcacc
ccccctgaccaggcattgtatatggccattaaatcaatgggctttgtcagcagcggggct
tttgcccccttgaccaaagccacaggggaagggctgaagcgtgcgctgcagggcaaggtg
gcctcgttcactgtgatgggctacgaccacgacggggagcctcgcctttcagggggtgac
atgatctctgcagtggtcatgggcccagatggaaacctttttggggcggacgtcagcgat
cagcagaacgggacctacctggtcagctaccgtccgcagctggagggagagcacctggtg
tccgtgatgatgtgcaaccaacacatcgagaacagccccttcaaagtggtggtgaagtcc
gggcgcagctacatcggcatcgggctgccggggctgtccttcggcagcgagggagacagc
gacggcaagctctgccgcccctggggggtcagcgtcgacaaagaaggcttcatcatcgtc
gccgaccgcagtaacaaccgcatccaggtgttcaagccgtgcgggaccttccatcacaag
tttggcacgctgggctcccggccgggccagttcgatcgccctgccggcgtggcctgtgac
agttcgcgtaggatcgtcgtggccgacaaggacaatcatcgcatccagatcttcacgttc
gaggggcagttcattctgaagtttggggagaaaggaacgaagaacgggcaattcaattac
ccatgggatgtggcagtcaacgcagagggcaagatcctggtctctgacacgaggaaccat
cgcgttcagctgttcgggcccgacggcgtgttccttaacaagtacggcttcgaaggggca
ctctggaagcactttgattcccccagaggtgtgacgttcaatcacgagggccacttggta
gtgacggacttcaacaaccatcggctcctggtcatccatccagattgccagtcggcacgc
ttcctgggctccgagggcaccggcaacggccagttcctgcgcccgcagggagtggcggtg
gatcaggaagggcgcatcatcgtggccgactccaggaaccaccgggtgcagatattcgag
tccaatggtagctttttatgcaagtttggcactcagggaagcggctttggtcagatggac
cgtccttcaggtatagctgtcacccctgatggcatgattgttgtggtcgactttggaaac
aatcgaattctcgtcttctaa
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