Parus major (Great Tit): 107198421
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Entry
107198421 CDS
T04864
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107198421 (DDX4)
Enzymes [BR:
pmaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107198421 (DDX4)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107198421 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
107198421
NCBI-ProteinID:
XP_033367213
Ensembl:
ENSPMJG00000015906
LinkDB
All DBs
Position
Z:16687210..16712316
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AA seq
618 aa
AA seq
DB search
MIEEDWNAEIGDEALLKSLEKVSLLERPDDPSSVFSPSVDSFDTDEFVNTQHQPVSSFGR
GRNFAAKGFQEGNGEDAVTQNRGFKGFGQGFHERNAVDGAGTQNRGFKGFRGGFGQGTKG
GQGDIPQSGTPSSRERGTVTDGAGPKVTYVPPPPPDDEQAIFARYQTGMNFDKYDENVVE
VSGLDPPPALMSFADTNMCHTLTVNIAKAGYSKPTPVQKYSIPIILAGRDLMACAQTGSG
KTAAFLVPVVAQMMRDGVTASSFKEQQEPECIITAPTRELVNQIFLEARKFVYGTCIRPV
VIYGGTQTDYSIRQVKQGCNILCATPGRLLDIIGRGKIGLHNVKYLVLDEADRMLDMGFG
ADMKKLVSFPDMPQKDKRQTLMFSATFPEEVQRLAGEFLKTDFLFVVVGHVGGACSDVQQ
NILQVSQYFKRDKLIEILHSIGNERTLVFVDTKKKADFIACFLCQENIPATSIHGDREQR
EREIALRDFRSGKCPVLVATSVAARGLDIESVQHVINFDLPSTIEEYVHRIGRTGRCGNT
GKAVGFFDNNSDGHLAQPLIKVLSDAQQEVPVWLMEIAFESEGGRLPVHTQKNYRGRGSV
NAGEVRMECSAREIESWD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagaagactggaatgcggagataggggacgaggcgttgctcaaatcccttgag
aaggttagcttgcttgagagaccagatgacccctcatctgttttcagtccaagtgtagac
tcctttgatactgatgaatttgtgaacacccagcatcagccagtgagtagttttggtcga
ggaaggaattttgcagccaaaggttttcaagaaggaaatggagaagatgccgttacacaa
aacagagggtttaaaggatttggacaaggttttcatgaacgaaatgctgtagatggtgct
ggtacacagaacagagggtttaaaggatttcgtggtggctttggacaaggtacaaaaggt
gggcagggggacatacctcagtctggaactcccagttctagagaaagaggaacagtcaca
gatggtgcaggtccaaaggtgacttacgtaccccctcctccacctgatgatgaacaagcc
atctttgcacgttatcagacaggaatgaattttgacaaatatgatgaaaatgttgttgaa
gtgtcaggactggaccctccaccagcgttaatgagttttgcagacactaacatgtgtcat
actttaactgtgaacattgctaaagctggatactctaaacctactccagtacagaagtac
agcattcctattatactggcaggacgggatttaatggcatgtgcccagacaggatcagga
aaaactgcagcctttcttgtaccagttgtggcccaaatgatgagggatggtgtaactgcc
agtagctttaaagagcagcaagaaccggaatgtattattactgccccaactagagaactg
gtaaatcagatcttcctagaagcaagaaaatttgtgtatgggacttgcataaggcctgtt
gtgatctatggaggtacacaaacagactattcgattcgtcaagtaaagcaaggctgtaat
atactgtgtgccactccaggaaggcttctagacatcattggaagaggaaagattggtttg
cataatgtgaaatacttggtactagatgaagcagaccgcatgcttgatatgggttttggt
gcagatatgaagaagctggtgtctttcccagacatgccacagaaagacaaacgccaaaca
ctaatgtttagtgccacttttcctgaggaagtacagaggctagctggtgaatttttgaaa
actgactttttatttgttgttgttggacacgtgggtggagcatgcagtgatgttcagcag
aatattcttcaagtttctcagtatttcaagagggataaactgatagaaattctacacagc
ataggtaatgaacgaactctggtctttgtggacacaaagaaaaaagcagacttcattgca
tgctttctttgtcaagaaaacataccagctactagtatccatggagatagagaacagaga
gagagagaaatagctcttcgggattttcgttctggaaaatgtccagttcttgtggcaacc
tcagtggcagcaagaggtctagacattgaaagcgttcagcatgttattaattttgatctt
ccttccaccattgaagagtatgtacaccgaattggacgaactggtcgttgcggaaataca
gggaaagcggttggcttctttgataacaattcagatggtcatcttgcacagcctctaatt
aaagtgctttcagatgctcagcaggaagttcctgtttggttgatggaaattgcgtttgag
tctgaaggaggacgactcccagttcatacccagaagaattacagaggcagaggcagtgtg
aatgcaggagaagtaaggatggagtgttctgcaagagaaattgagtcatgggattaa
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