Parus major (Great Tit): 107198466
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Entry
107198466 CDS
T04864
Symbol
HCN1
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
KO
K04954
hyperpolarization activated cyclic nucleotide-gated potassium channel 1
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmaj04040
]
107198466 (HCN1)
Ion channels [BR:
pmaj04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
107198466 (HCN1)
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Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
107198466
NCBI-ProteinID:
XP_015471005
Ensembl:
ENSPMJG00000015872
LinkDB
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Position
Z:complement(14188968..14383334)
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AA seq
853 aa
AA seq
DB search
MEAGKRSSSAGSRDDGSANSFPAKPAASAEKAQSSPGSGGVKEHGNSVCFKVDGGGAEEP
VVGFEDAEGPRRQYGFMQRQFTSMLQPGVNKFSLRMFGSQKAVEKEQERVKTAGFWIIHP
YSDFRFYWDLIMLIMMVGNLVIIPVGITFFTEQTTTPWIIFNVASDTVFLLDLIMNFRTG
TVNEDSSEIILDPKIIKMNYLKSWFVVDFISSIPVDYIFLIVEKGMDSEVYKTARALRIV
RFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQF
LVPLLQDFPPDCWVSLNGMVNDSWGKQYSYALFKAMSHMLCIGYGARAPVSMSDLWITML
SMIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPAEMRQKIHDYYEH
RYQGKIFDEENILNELNDPLREEIVNFNCRKLVATMPLFANADPNFVTAMLSKLRFEVFQ
PGDYIIREGAVGKKMYFIQHGVAGVITKSNKELKLTDGSYFGEICLLTKGRRTASVRADT
YCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILLQKFQKDLNTGVFNNQ
ENEILKQIVKHDREMVQTIAPVSLQQMPALNSSTSASSRGRTQSPPVYTSSSLSHTNLHS
PSPSTQPPQQAVILSPCSYTTAVCSPPVQSPLAGRTFQYASPTASQLSLMQQQQQQQQQQ
QPQAAQQPPGAPQKNEVHKSTQALHNTNLTREVRPLSASQPSLPHEISTLIARPHPTVGE
SLASLPQPAPGPGVPPAGRASVPQRVSLFRQMSSGAIPPNRGAAPPAAPLQRDSSTVLST
EPEGDKPRFASNL
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgggaagcgcagctcctccgccggcagccgggacgatggcagcgctaactcc
ttcccagccaagccggcggcctcggcggagaaagcccagagcagccccggcagcggcggc
gtgaaggagcatggcaactccgtgtgcttcaaagtggacggcggcggggccgaggagccc
gtggtgggcttcgaggatgccgagggaccccggcggcagtacggcttcatgcagcggcag
ttcacctccatgctgcagccgggggtcaacaaattctccctccgcatgttcggcagccag
aaggcggtggagaaggagcaggaaagggttaaaactgcggggttctggatcatccacccc
tacagcgacttcaggttttactgggacttaatcatgctcataatgatggttggaaacctt
gtcattataccagtcggaatcacattcttcacagaacaaacgacgacaccatggattatt
ttcaatgtggcatcagacactgtttttctattggacttgatcatgaattttagaactggg
actgtaaacgaggacagctctgaaataatactggaccctaaaatcattaagatgaattac
ttaaaaagctggtttgtggttgacttcatctcatcaataccagtggattatatctttctc
attgtagaaaaaggaatggattcagaggtttacaagacagcaagagcccttcgtattgtg
agatttacaaaaatcctcagcctgttacgtttattgcgtctttcaagattgattagatac
atacaccagtgggaagagattttccacatgacatacgatctggccagcgcagtggtgaga
atctttaatctgattggaatgatgctcctgctgtgccactgggatggttgtctacagttt
ctagtaccattactccaggatttcccaccagattgctgggtgtccctaaacggtatggtt
aacgattcctggggaaagcagtactcatatgcactcttcaaagccatgagccatatgctc
tgcatcgggtacggagcccgcgcccccgtcagcatgtcggacctgtggataacgatgctg
agcatgattgtgggggctacctgttatgccatgtttgttggtcatgccactgccctcatt
cagtctctggattcatcgcgacggcagtatcaagaaaagtacaaacaagtggaacagtac
atgtcattccacaagttaccagctgaaatgcgccagaagatccatgattattatgagcat
cgctaccaaggcaagatctttgatgaagaaaatattttgaatgagctcaatgatcctctc
agggaggagattgtcaacttcaactgtcggaagctggtggctacaatgcctctttttgct
aatgcagacccaaattttgtgactgccatgctaagcaaactgagatttgaggtgttccaa
cctggagattatattatccgagaaggggctgtgggtaagaagatgtatttcattcaacat
ggtgttgctggtgtcatcaccaagtccaacaaggagctgaagctgacagatggctcttac
tttggagagatctgccttttgaccaagggccgtcgaactgccagtgtacgagcagacacg
tactgtcgcctgtactccctctcagtggacaacttcaacgaggtcctggaagagtacccc
atgatgagaagagcctttgaaacggtggcaattgatagacttgacaggataggtaagaag
aactcgatcctgctgcagaagttccagaaggacctcaacaccggcgttttcaacaaccaa
gagaacgagatcttgaagcagatcgtgaagcacgacagggagatggtgcagaccatcgcc
ccggtgagcctgcagcagatgccagccctcaactccagcacctcggcctcgtcccgcggc
aggacgcagtcccctcccgtgtacaccagcagcagcctctcgcacaccaacctgcactcg
ccctcgcccagcacgcagccgccacagcaggctgtcatcctgtcgccctgctcctacacc
acggccgtctgcagcccgccggtacagagcccgctggccggccgaactttccagtacgcc
tctccgaccgcctcgcagctctccctcatgcagcagcagcagcagcagcagcaacagcag
cagccgcaggcggcgcagcagccgccgggagccccgcagaagaacgaagtgcacaagagc
acccaggccctccacaacaccaacctgacgcgggaggtgcggccgctgtccgcctcgcag
ccctccctgccccacgagatctccaccctgatcgccaggcctcaccccaccgtgggggag
tccctcgcgtccctcccgcagcccgccccgggccccggcgtgcccccggccggccgggcc
tccgtgccccagcgggtctcgctgttccggcagatgtcctcgggagccatccccccgaac
cgcggggccgcgccgcccgcggcgccgctgcaaagggattcttccacagtcttaagcaca
gagcccgagggagacaaaccgcggttcgcctcaaacttatga
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