Parus major (Great Tit): 107198574
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Entry
107198574 CDS
T04864
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107198574 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmaj02000
]
107198574 (ABCB1)
04147 Exosome [BR:
pmaj04147
]
107198574 (ABCB1)
04090 CD molecules [BR:
pmaj04090
]
107198574 (ABCB1)
Enzymes [BR:
pmaj01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
107198574 (ABCB1)
Transporters [BR:
pmaj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
107198574 (ABCB1)
Exosome [BR:
pmaj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107198574 (ABCB1)
CD molecules [BR:
pmaj04090
]
Proteins
107198574 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Rad17
RsgA_GTPase
AAA_5
Zeta_toxin
AAA_28
AAA_29
G-alpha
AAA_30
AAA_14
AAA_19
AAA_15
nSTAND1
DUF2057
Motif
Other DBs
NCBI-GeneID:
107198574
NCBI-ProteinID:
XP_015471143
Ensembl:
ENSPMJG00000007196
LinkDB
All DBs
Position
2:complement(20970885..21018916)
Genome browser
AA seq
1285 aa
AA seq
DB search
MPSEDEKKYSADGNSHEIAAFSQDHESEDKEKTKKKKKKGEKPKVVSPFTLFRYSTWSDK
LLMILGTVLAVAHGSSLPIAMIIFGDMTDSFVASGNNNFTGNISMNFTSDMLDKLEEDMT
RYAYYYSGIAAGVLLAAYIQTSFWTLAAGRQIKKIREKFFHAIMRQEIGWFDVNDVGELN
TRLLDDVSKINDGIGDKIGLLVQALTTFVTGFIVGLIRGWKLTLVILAVSPVLGLSAALW
AKVLSAFTDKEQAAYAKAGAVAEEVLAAIRTVIAFGGQEKEIKRYHKNLEDAKRIGIRKA
ITANISMGAAFLLIYASYALAFWYGTTLILTDDYTIGKVLTVFFSVLIGAFSIGQTAPSI
EAFASARGAAYTIFNIIDNEPQIDSYSETGYKPDHIKGNLEFKNVYFNYPSRPDVEILKG
LNLKINSGQTVALVGGSGCGKSTTVQLIQRFYDPKEGTVTIDGQDIKTLNVRYLREVIGV
VNQEPVLFATTIAENIRYGREDVTMEEIEKATKEANAYDFIMKLPKKFETVVGERGAQLS
GGQKQRIAIARALVRNPKILLLDEATSALDTESESVVQAALDKAREGRTTVVVAHRLSTV
RNADLIAVFEGGVITEQGNHAKLLERKGIYHKLVNMQAIEGEVPSSENDENVRSVKNNES
EPESEESLTKGLRRQSIRRSMKKPGEQNDSPDEEKTSPDEELPPASFLKIMKLNKTEWPY
FVAGILCAIINGALQPAFAIIFSEIIGIFRETDKDILRKQSNLYSLLFLVLGIISFFTFF
FQGFTFGKAGEILTMRLRFMAFKAMLRQDMGWFDNPKNSTGALTTRLANDASQVKGATGV
RLALIAQNIANLGTGIIISLVYGWQLTLLLLAVVPIIAVAGMIEMKMLAGHAKKDKRELE
AAGKIATEAIENIRTVVSLTRERKFESMYGEHLIVPYRNSVKKAHIFGFCFALSQAMMFF
TYAGCFRFGAYLVVNGHMEYKSVFLVFSAVVFGAMALGQTSSFAPDYAKAKISASHLFQL
FERVPSIDSYSEEGDKPETFEGNITIRDVAFNYPNRPEVKILQGLNLKVEKGQTLALVGS
SGCGKSTVVQLLERFYDPLDGEMLFDGKNAKALNIQWLRAQIGIVSQEPILFDFTIAENI
AYGDNSRQVSFEEIVRAAKEANIHSFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALV
RKPQILLLDEATSALDTESEKIVQEALDKAREGRTCIVIAHRLSTIQNADKIAVVQNGKV
IEQGTHQQLLAEKGVYYSLVNVQSG
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgaagatgaaaagaagtattctgcagatggaaatagtcatgagattgctgca
ttcagccaggatcatgaatctgaagacaaagaaaagactaagaagaagaagaagaaaggg
gaaaaacctaaggtggtcagcccatttacactgtttcgatactccacctggtcagataaa
ttattaatgatacttggcactgtgctggcagtagctcatggaagcagtctccctattgca
atgatcatttttggtgatatgactgatagttttgttgcttctggaaacaataattttaca
ggaaacatttcaatgaatttcacttcagatatgcttgacaagctggaagaagatatgaca
agatatgcatactactattctggaatagcagctggtgttcttcttgctgcttatattcag
acttcgttctggaccttagcagcaggtcggcaaataaaaaaaattagagaaaaatttttt
catgcaattatgaggcaggaaattggatggtttgatgtaaatgatgtgggagaacttaac
actcgtcttttagatgatgtctccaagattaatgatggaataggtgacaagattggattg
cttgttcaagcactaacaacatttgtgacaggatttattgttggtctcataagagggtgg
aaattaacccttgtaatactagcagttagtcctgtcctgggactttcagcagccctttgg
gcaaaggttctctctgctttcactgacaaagaacaagctgcatatgcaaaagcaggtgct
gttgcagaagaagttctggcagccatccgtactgtaatagcttttggaggacaggaaaaa
gaaattaaaagataccataaaaatttagaagatgctaaacggattggaataagaaaggct
attacagctaatatttctatgggtgctgctttcttactgatatatgcatcatatgcactg
gcattctggtatggaactactttgatcttaactgatgattacactattggcaaagttctt
acagtctttttctctgtattgattggagctttcagtattggacagactgctccaagcata
gaggcatttgctagtgcaagaggagctgcctatacgatctttaatataatagacaatgaa
cctcaaattgacagctattcagagacaggttacaaaccagaccacataaaagggaacttg
gaattcaaaaatgtttactttaattatccatccagaccagatgttgagatactgaagggc
ttgaatctcaagattaattctggccagacagtggccctggttggtggcagtggctgtgga
aaaagtacaactgttcagctcatccagagattttatgatcccaaggaaggcacggttacc
atagatgggcaagatattaagaccttaaacgtaaggtatctgcgggaggttattggtgtg
gtgaatcaggagcccgtgctctttgccactactattgcagaaaatattcgctatggccgt
gaggatgtcaccatggaggagattgaaaaagccaccaaggaggcaaatgcttatgacttc
atcatgaagctgcccaaaaaatttgaaactgtggttggagaaagaggggcacagctcagt
ggaggccagaagcaaagaatagcaattgcccgagctctggttcgcaatcctaaaattctt
ctgcttgatgaggcaacatcagctttggatactgagagtgaatcagttgtgcaggcagca
ctggacaaggcaagggaagggcgcaccacggtcgtggttgctcatcgactgtcaacagtc
cgaaatgcagatttgatagctgtgttcgaaggtggagttatcacagagcaagggaatcac
gctaaattgcttgagagaaagggaatctaccacaaactcgttaacatgcaggcaatagaa
ggtgaagttccatcatcagaaaatgatgagaatgtacgtagtgtcaaaaacaatgaatct
gaaccagaatctgaagaatccttaactaaaggattgagaagacaatcaattaggagaagc
atgaaaaagccaggagagcaaaatgatagtcctgatgaggaaaaaacttcacctgatgaa
gagctacctccagcttcatttctgaaaattatgaagttgaacaaaactgaatggccatac
tttgtagctggaatcttgtgtgcaattatcaatggagctttacaacctgcatttgcaatc
atattttccgaaattatagggatttttagagagactgacaaggacatcttaagaaaacag
agcaacttatattcactgctgtttttagtacttgggatcatttcctttttcactttcttt
ttccagggtttcacatttggcaaagctggagaaattcttacaatgaggcttcgattcatg
gcatttaaagcaatgcttagacaggatatgggctggtttgataatcctaaaaatagcact
ggagcattaactacaagacttgccaatgatgcctctcaagtgaaaggagcaactggtgtc
agattagcattaattgcacaaaacatagccaacctggggactggaattattatatcatta
gtttatggctggcagctgaccctgttacttttagctgttgtgcccatcattgcagtggca
ggaatgattgaaatgaagatgttggctggccatgctaagaaagataaaagagagctggaa
gctgcaggaaagattgccacagaagcaatagaaaatattagaactgttgttagcttgacc
cgagaaagaaaatttgagtcaatgtatggagaacatctgattgtaccatacagaaattct
gtgaagaaggcacatatatttggcttttgttttgccctctcacaagcaatgatgttcttt
acctatgccggctgtttccgatttggtgcctatctcgtggtaaatggacacatggagtat
aaaagtgtatttttagtattttcagctgttgtatttggtgcaatggcactaggacaaacc
agttcttttgctccagactacgccaaagccaagatatcagcatcccacttgtttcagcta
tttgaaagagtgccctcaatagacagttacagtgaggaaggagacaagcctgaaacattt
gaaggaaacataacaatcagagatgtggcatttaactacccaaaccgaccagaggtcaaa
atcctccaaggtttgaatctaaaagtagaaaagggacaaactctggctcttgttggcagc
agtggctgtggaaagagcacagttgttcagctgctggagagattttatgacccacttgat
ggagaaatgctttttgatggcaaaaatgcaaaggcactgaatatccagtggttgagagct
cagattggtattgtctcacaagaaccaatcctgtttgacttcactattgctgaaaacatc
gcctatggagataacagtcggcaggtgtcctttgaggaaattgttagagcagcaaaagaa
gccaatattcattccttcattgactctctgccagataaatacaatacccgtgtaggagac
aagggaacccagctttctggtggccagaaacaacgtattgctattgcccgagctcttgta
cgtaagccccaaattctgcttctggatgaagctacttctgccttagacacagaaagtgaa
aagattgtccaggaagcgctggataaagctcgagaaggtcgtacatgcattgtcatagct
caccgcctctccaccatccaaaatgctgacaagatcgccgtggtccagaatggcaaggtc
atagagcagggcacccatcagcagcttctggctgaaaaaggtgtctactattccctggtc
aatgttcaaagtgggtaa
DBGET
integrated database retrieval system
