Parus major (Great Tit): 107198832 Help Entry 107198832         CDS       T04864                                  Symbol XAB2 Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism pmaj  Parus major (Great Tit) Pathway pmaj03040   Spliceosome Brite KEGG Orthology (KO) [BR:pmaj00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     107198832 (XAB2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pmaj03019]     107198832 (XAB2)    03041 Spliceosome [BR:pmaj03041]     107198832 (XAB2) Messenger RNA biogenesis [BR:pmaj03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      107198832 (XAB2) Spliceosome [BR:pmaj03041]  Complex B   Other components    Prp19-related factors     107198832 (XAB2)  Complex C     107198832 (XAB2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 TPR_19 TPR_12 Suf TPR_8 TPR_2 TPR_15 TPR_7 TPR_MalT TPR_16 PPR ARM_TT21_C TPR_18 TPR_1 TPR_9 Motif Other DBs NCBI-GeneID:  107198832 NCBI-ProteinID:  XP_033367437 Ensembl:  ENSPMJG00000002318 LinkDB All DBs Position Unknown AA seq 982 aa AA seqDB search MAPPGPLRFRLRQPRNTAAAHWSRLQHRRSLLARSIDEGAGRRPDEPMSRGGVSESGAPE VRAARGEMAAAEAEMAAREEPPGAGPGLEQEPGAMEPGAMAEPAPGAGPGVEAEPGAGLG AGPGPERPELCFEEEEVQHEEELLRNPFSVRGWLRYAQARQRGPRPRLNQIYERALRELP GSYKLWYQYLRQRRAQVKGRCPSDPAFEEANAVHERALVFMHKMPRIWLDYCQFLAEQGR ITRTRRTFDRALRALPITQHRRLWPPYLSFVRKHPLPETAVRVFRRFLKLCPEEAEQYVS YLRSVGRLDEAAQVLARLVNDERFVSRQGKSNYQLWQELCELLSQHPDRVRSLDAGGIIR GGLTRFTDQRGRLWGALADCYVRCGHLEKARDVYEEAVQTVMTVRDFTQVFDSYARFEES VIGALLDTQAQLGRGQDEEVELELRLARFERLMARRPLLLNSVLLRQNPHNVHEWHKRVA LHQGQPDKIIQTFTEAVRTVDPQRATGRPHELWVAFARFYEDNGQLDDARSILSRATRVR FRRVEDLAAVWCEFGELELRHQRHQEALRVLRKATALPAKRAEYFDSSEPVQNRLYKSLK VWSMLADLEESLGTFQSTRAVYERILDLRIATPQIVINYALLLEEHGRFEDSFKAYERGI ALFRWPHVGDLWLTYLSKFVARYGGRKLERARDLFEQALDGCPPQHAKTIYLLYAQLEER FGLARRAMAVYERGTRAVPPAQQHDMFHIYIRRAAELFGVTHTRPIYQRAIEVLGDDAAR ELCLRFADMECKLGEVDRARAIYTYCSQICDPRITGSFWQTWKEFEIRHGNEDTIREMLR IKRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGLDEMKLLEQRAEALAAEAQR DTPRPTQQVLFVRAEAPPGAEPSLSQQGNPEEIDLGDDEGDEPDEVQLELWDGDGDRDPL RAPLASPEASWEATKPPLTFSP NT seq 2949 nt NT seq  +upstreamnt  +downstreamnt atggctcctccgggtcccctgcgcttccggctccgccagccccgcaacaccgcggccgcc cattggtcgcgcctccagcaccgccgcagtctattggctcggagcatagatgagggggcg gggcgaaggccagatgagccaatgagcaggggcggtgtcagtgagagcggcgcgccggaa gtgagggcggcgcgcggggaaatggcggcggccgaggccgagatggcggcgcgggaggag ccgccgggagcggggccaggcctggagcaggagccgggagcgatggagccgggagcgatg gcggaaccggcgcccggcgcggggccgggggtggaagcggagccgggagcggggctcgga gcggggccgggcccggagcggccggagctgtgctttgaggaggaggaggtgcagcacgag gaggagctgctcaggaacccgttctcggtgcggggctggctccgctacgcccaggcccgg cagcgcgggccgcgcccccgcctcaaccagatctacgagagagccctgcgggagctgccc ggcagttacaagctgtggtaccagtacctgcggcagcgccgggcgcaggtgaaggggcgc tgcccctcagaccccgccttcgaggaggccaacgccgtgcacgagagagcgctggtgttc atgcacaagatgccgcggatctggctggattactgccagttcctggcggagcagggccgc atcacgcggacgcgccgcacgttcgaccgcgcgctgcgggcgctgcccatcacccagcac cgccggctctggccgccctacctgagcttcgtccgcaaacaccccctgcccgagaccgcc gtgcgtgtcttccgccgcttcctcaagctgtgccccgaggaggcagagcagtacgtgtcc tacctgcgctccgtgggccgcctggacgaggccgcgcaggtgttggcccggctggtgaac gacgagcgcttcgtgtcccgccagggcaagtccaactaccagctgtggcaggagctgtgc gagctgctgtcccagcaccccgaccgcgtgcgctcgctggacgccgggggcatcatccgg ggcgggctgacgcgcttcaccgaccagcgcggccggctctggggggccctggccgactgc tacgtgcgctgcggccacctggagaaggcccgggatgtgtacgaggaggccgtgcagacg gtgatgaccgtgcgggatttcacgcaggtgttcgacagctatgcgcgctttgaggagagc gtcatcggcgccctgctggacacccaggcccagctgggccggggccaggacgaggaggtg gagctggagctgcgcctggcgcgcttcgagcgcctcatggcgcggcggccgctgctgctc aacagcgtgctgctgaggcagaacccccacaacgtccacgagtggcacaagagggtggcc ctgcaccagggacagcctgacaagatcatccagaccttcacagaggccgtccgcaccgtg gatccccagcgcgccaccggccgcccccatgagctctgggtggccttcgcccgcttctac gaggacaacgggcagctggacgatgccaggtccatcctgtcacgggccacgcgggtgcgg ttccggcgcgtggaggatttggctgcggtctggtgcgagttcggggagctggagctgcgg caccaacgtcaccaggaggccctgagggtgctgcggaaagccacggcgctcccggccaaa cgcgccgagtacttcgacagctcggagcccgtccagaaccggctctacaaatccctcaag gtgtggtccatgctggccgacctggaggagagcctgggcaccttccagtcgacgcgtgct gtctacgagcgcatcctggacctgcgcatcgccaccccccagatcgtcatcaactacgcg ctgctgctggaggagcacggccgcttcgaggacagcttcaaggcgtacgagcgcggcatc gcgctgttccggtggccgcacgtgggggacctgtggctcacgtacctgtccaagttcgtg gcccgctacggtggccggaagctggagcgggcgcgggacctcttcgagcaggcgctggac gggtgccccccgcagcacgccaagaccatctacctgctgtacgcgcagctggaggagcgg ttcgggctggcgcgccgggccatggccgtgtacgagcgcggcacgcgggcggtgccgccg gcccagcagcacgacatgttccacatctacatccggcgcgccgccgagctcttcggcgtc acccacacgcggcccatctaccagagagccatcgaggtgctgggggacgacgccgcgcgg gagctgtgcctgcgattcgccgacatggagtgcaagctgggagaggtggatcgcgcccgc gccatctacacctactgctcgcagatctgcgacccccggatcacgggcagtttctggcag acgtggaaggagtttgagatccggcacggcaacgaggacacgatccgggagatgctgcgc atcaagcgcagtgtgcaggccacctacaacacccaggtcaacttcatggcctcgcagatg ctcaaggtgtccggcagcgccaccggcacagtgtcggacctggccccgggacagagcggc ctggacgagatgaagctgctggagcagcgagccgaggcgctggcggccgaggcccagcgg gacacgccccgccccacccagcaggtgctgtttgtcagggccgaggcccccccgggggca gagccctccctgtcccagcaggggaaccccgaggagatcgacctgggcgacgacgaggga gacgagccagacgaggtgcagctggagctgtgggatggcgatggggacagggaccccctc agggctcccctggcttctcccgaggcttcctgggaggcgacaaaaccccccctgacgttc tcaccgtga

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