Parus major (Great Tit): 107198983 Help Entry 107198983         CDS       T04864                                  Symbol ALMS1 Name (RefSeq) Alstrom syndrome protein 1   KO K16741   alstrom syndrome protein 1 Organism pmaj  Parus major (Great Tit) Brite KEGG Orthology (KO) [BR:pmaj00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:pmaj03036]     107198983 (ALMS1)   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:pmaj03037]     107198983 (ALMS1) Chromosome and associated proteins [BR:pmaj03036]  Eukaryotic type   Centrosome formation proteins    Other centrosome associated proteins     107198983 (ALMS1) Cilium and associated proteins [BR:pmaj03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    107198983 (ALMS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ALMS_motif Motif Other DBs NCBI-GeneID:  107198983 NCBI-ProteinID:  XP_015471759 LinkDB All DBs Position Unknown AA seq 2294 aa AA seqDB search MLRQAAAGLGTEGPAVPPSQPQDTAGGTSGCSGHGPGGAEPTAGSHELTGSELSIERGHK VTEISPSFSLGAEGSFSLHLARPNFQSTPGVFLERTGKVEGRGVPAIPADLQASLSRSEE SPVPGAGKEDPAQRAVEESCGHLESLRLESPGCGRMQPCPALGFLEKVGAWHVSQPEQVP DSSGVPGALPPARRASRSLPRAASCILAGQRSPGDPQDCAAPSSSGAGSVGSWDFPHESL QLGPARGRSRSDTSLSSCRESRALVRASSACSESSALVRASSACSENRTSFRTSVRTSPA CSENRTSFRTSPACSDSSALVRSSPACSENRTSFRTSVRTSVRTSPACSENRTSFRTSPA CREEPPGHPSPTMGLSQSSSMGSLAGGAGAGHGDTRRSSAPDVFVCGLAQLLTKHEDCEE KENQSLNLNIATGHDIMENFGAVSLESLDFPVGSGEPQGAPGCGLGSLVVPRPCPSAGEN SSIPPGAALQTPEKEELNIEERIPIYLRNLGIEQSPGSILAPFVPRRPLWELEFSPSGLR SLQDPLGCLARVPPQAQGTLLPAFQMSEAGFGRVTSPGSVSPPGGSAAVLSPRELSGEPP DSQGGVPCPQPGLPVPVSPARAAEGSPGSAGAEQDVPSRSSGRDSARDGGTSARVPFAGR EPGSLQGWAAGALSGAGNGVELDRGSQSCSGGSESGQGWEGDSPLGSGALRELRELLARA EDLAAGWARPAFPSASRTETGEAPPALPGREPDPGDPRVGKERIPEPVTQRGVRGEGLGF HPPDPGSCQQGRGDASAVSLQRREGLRGAAQRPRPGRAEPEGCSAVPRSQAVLVGPAQSG ASSGLSSAPQPGPPPLQPPGTGPALPGSSRGSVGRAGGAQGTRGSSSEDSSSGDSLGARV RSLLGSTRGHLGSTGGQPGTFRGALESSSSGDSLSARVRSLLGSTQGQPGTFHGALQDSS GDSLAARVRSLLGSTGGHLGSTKGQPGTFHGALQDSSSGDSLSARVRSLLGPAAPGTAAH QILRDAEEQERKIRAWVKLKLASQSQESGPDRDGETQHRMEGMKAELFPKTRESAQAKDP WLCGLGAGSEHLRKQEQDLERFQAPRFPRDRHRQTDRQLFPSSSPPAVPVLRADPWDCSL LQDMQLKLWGPAGLQDMQLETRSTAGLQDMQLKPQSAAGLQDMQLETRSTAGLQDMQLET RRTDGLQDMQLKPQSTAGLQDMQLEPWNSSELQDMQLKPQSTAGLQDMQLEPWNSSGLQD MQLEPWSTAELQDMQDMQLKPQSTADLQDMQLKPWSTAGLQQMQDMQLKPQSSTELQDMQ LKPQSSTELRVCEQQPAVERSSAVAELCGPLAGDPCAGSGAAAPCARGQPGEPSSSDTLC SWRRAPAPLGPRARSPSPARDGILPGEAPCARPGEERLGTEPWERIQSCPPSPTLARSRE PGDAAQLPPVPTATAGAGAAQGTARGAGSIHTGQTQSLAAQQPQIHTGQTQSLAAQADRS ELRGAGAAGAGMELWDKPQVKALKAAPEASVEAQPLLLPYKPLGSAGMYYVPCQRSGASV SPETSEASRNSSHSGSEDVAAVLLARVLALGDDSPPARTAVQHRGTSHGHRAKLAWAEEQ GTPLEQSSELPDGSGRVKPSGCARSPSSGGCCPAPRQLCGVCAGAGPAGPSSGAVLAGSQ RQGPRVSPGPARQLWAVPAEADDSGSEEPGAALGSGMEPQQDNAGRDPAPPSPADLPAGS RGKAARHRSRPGGSLGKLWVTFLERQSRQQQDSGDSGELSLVERLERLARLLQNPIRHTL APTAAREELPEGCTQGRERLKIRLAGGGRSGSGTEPRGTRAGRRPQVIQEEPGAHRPGQK VIQHLKTILEQQQQLGIASDSSSEARLSTEPGGCSSCSTSGWDTGTPAGPDTSPASGDSS SLSLATIDTARLLRAFGEHRLGLGSQLGSQPVTQLGSQLGSQLAPQPVTQLAPQPVTHLG SQLGSQPVPQLAPQLGSQLGSQLAPQPVTQPAPQLSPELPPRLAQLYCAISQQRSRSERW DEESEGAGAESLGKGQQSQPAPQLSPELPPRLAQLYCAISQQRSRSERWDEESEGAGAES LGKGQQSQSTIPFSSDSTCASSSSWGPSSALRNKRRPRMLNKGIQAGTQWLVPAEDLKCD WRKENQSSALPGPGPAWFEPWSSTKPWREPLREKNWEQQPRLGRAGAGRGKLTLQEALAL HRPDFISRSGQRLRHLRLLREERRLQRLYEQLPEVRRKREEEQRKLEYSSHRLQARLYRT KITNRVLGKKVSWS NT seq 6885 nt NT seq  +upstreamnt  +downstreamnt atgctgaggcaggcagcagccgggctgggcacagaggggccggctgtgccccccagccag ccccaggacacggctgggggcacctcggggtgctctgggcacggcccggggggagcagag cccaccgcaggcagccatgagctgaccggctccgagctctccatagagaggggacacaaa gtcacagagatctccccttccttcagcctgggagctgagggctccttctccctgcacctg gctcgtcccaacttccagtccacccctggggtgttcctcgagagaaccgggaaggtggaa ggacgtggggtcccggccatccctgcagaccttcaggcctctctttcccgctcagaggag tcccctgtccctggagcagggaaggaagatcctgcccagagagcagtggaagaaagctgt ggccatttggagtccctgaggctggaatcccctggctgtggcaggatgcagccctgccca gcgctgggtttcctggagaaggtgggagcgtggcacgtgagccagccagagcaggttcct gacagctcaggggtcccaggggcgcttccccctgcaaggagagcctccagatcacttccc agggctgcaagctgtattttagcaggacagaggagccctggggatccccaggactgcgct gctccctcctccagtggggcaggttctgtgggcagctgggatttccctcatgagagcctc cagctcggtccagctcggggcagatcccgctctgacacctccctgagctcctgcagggag agcagagccttggtcagagccagctcagcctgcagtgagagctcagccttggtcagagcc agctcagcctgcagtgagaacagaacctcgttcagaacctcagtcagaaccagtccagcc tgcagtgagaacagaacctcattcagaaccagcccagcctgcagtgacagctcagccttg gtcagaagcagtccagcctgcagtgagaacagaacctcgttcagaacctcagtcagaacc tcagtcagaaccagcccagcctgcagtgagaacagaacctcgttcagaaccagcccagcc tgcagggaggagcctccaggacaccccagccccaccatgggtctctcccagagctcctcc atgggctccctggcaggaggggctggagctgggcacggtgacaccaggcgaagctcggcc ccagatgtgttcgtgtgcggccttgctcagctccttacaaagcacgaggattgtgaggaa aaggaaaatcagtccctcaacctgaatattgccactggacacgatatcatggagaacttt ggagctgtttccttggagagtttggattttcctgtcggctctggggagcctcagggggcc ccaggctgtggtttgggctccctggtggtgcccaggccctgccccagtgcaggagagaac agctccatcccccctggagcagcgctgcagactcctgagaaagaagagttgaatattgaa gaaaggatcccgatctacctgcggaacctgggcatcgagcagtcccctggcagcatcctg gcgcccttcgtgccccggaggcccctgtgggagctggagttctccccctcggggctcagg agcctgcaggatcctctgggctgcctggccagggtccccccgcaggcgcagggtactctg ctgccagccttccagatgtcagaggccggctttggcagggtgacatccccggggagcgtg tcccctcccgggggctctgcggcggtgctgtccccccgggagctgtccggggagccccca gacagccagggcggtgtgccgtgtccccagccggggctgcctgtccccgtgtccccagcc cgggctgcggagggttccccgggatctgctggagcggagcaggacgtgcccagccgctcc tcgggcagggacagtgcccgggacggggggacgagtgctcgggttccctttgctggccgt gagcccggcagcctgcagggatgggcggctggggctttgtctggagctggcaatggagtg gaattggacagagggtcccagagctgcagcgggggaagtgagagcggccagggctgggaa ggagattccccgctgggctccggggccctgcgggagctgcgggagctgctggcacgggcc gaggatctggctgccggctgggcccggcctgccttcccctcagcttcccgcacggaaacc ggggaggctcccccggcactgcctgggagagagcccgatcccggggaccccagggtgggg aaggagcggatccctgagcctgtgacccagaggggtgtgcggggagaggggctggggttc catcctccggatcctggcagctgccagcagggacggggagatgcctcggctgtcagcctg cagcggcgggaagggctgaggggagcggcccagcggcccaggccgggcagggcagagccg gagggctgcagcgctgtgcccaggagccaggctgtgctggtggggccggcacagagcgga gccagcagcggcctgagctcggccccacagccgggccctcctcccctgcagcccccgggc accggccccgctctcccggggagctcccggggctctgtgggccgggccggaggggcgcag gggacacggggcagcagcagcgaggacagcagcagtggggattcgctcggtgcccgtgtc aggagcctcctgggcagcaccaggggacacctgggcagcaccgggggacagccgggcaca ttccggggggctcttgagagcagcagcagtggggattcgctcagtgcccgtgtccggagc ctcctgggcagcacccagggacagccgggcacattccatggagctctccaggacagcagt ggtgattccctggccgcccgtgtccggagcctcctgggcagcaccgggggacacctgggc agcaccaaaggacagccgggcacgtttcatggagctctccaggacagcagcagtggggat tcgctcagtgcccgtgtccggagcctcctggggccggcagccccgggcaccgctgcccac cagatcctcagggacgccgaggagcaggagaggaaaatccgagcctgggtgaagctgaaa ctggccagccagtcccaggagtctgggccagacagggatggagagacccagcacaggatg gagggaatgaaggcagagctgttcccaaagaccagggaatccgcacaagccaaggatccg tggctctgtggtttgggagcaggttctgagcatctgaggaagcaggaacaggacctggag cgtttccaggctcccaggtttcccagggacaggcacagacagacagacagacagctcttc ccgtccagctccccaccagcagtgccagtcctgagagctgatccctgggattgctccctg ctgcaggacatgcagctcaaactgtggggtcctgctgggctgcaggacatgcagctggag actcggagcactgctgggctgcaggacatgcagctgaagccccagagcgctgctgggctg caggacatgcagctggagactcggagcactgctgggctgcaggacatgcagctggagact cggagaacagatgggctgcaggacatgcagctgaagccccagagcactgctgggctgcag gacatgcagctggagccttggaattcttctgagctgcaggacatgcagctgaagccccag agcactgctgggctgcaggacatgcagctggagccctggaattcttctgggctgcaggac atgcagctggagccttggagcactgctgagctgcaggacatgcaggacatgcagctgaag ccccagagcactgctgacttgcaggacatgcagctgaagccttggagcactgctgggctg cagcagatgcaggacatgcagctgaagccccagagcagcactgagctgcaggacatgcag ctgaagccccagagcagcactgagctgcgagtgtgtgagcagcagccagccgtggagcgc agcagtgccgtggcagagctctgtggccccctggcaggggatccctgtgcagggagcggt gctgctgccccctgtgcccgcgggcagccgggcgagccgagctcctccgacaccctctgc tcctggaggcgggctccagccccgctgggaccccgggcacgcagccccagcccggccagg gacgggatcctgccgggggaggctccctgtgctcgccctggggaggagaggctgggcaca gagccctgggagaggatccagagctgtccccccagccccacgctggcccgctcccgggag cccggggatgctgcacagcttcctcctgtccccactgccactgctggagctggagctgct cagggaacagcccggggggctgggagcatccacactgggcaaacacagagcctggctgca cagcagccccaaatccacactgggcaaacacagagcctggctgcacaggccgatcgctcc gagctgcgcggcgccggggccgctggagctgggatggagctgtgggacaaaccccaagtg aaggctttaaaagcagctccagaagcttccgtggaagcccagcccttgctgctgccctac aagcccttgggaagtgctggcatgtattatgtgccctgccagagatcaggagccagcgtg tccccagagaccagcgaggccagcagaaacagctcccactcagggtctgaggatgtggct gcagtgctcctggcccgagtgctggccctgggggacgattcccctcctgccaggacagct gtccagcacagagggacaagccatggccacagggctaagctggcctgggctgaggagcag gggacaccactggaacagtcttcagagctccccgatggctccgggcgtgtaaaaccctcc ggttgtgcccgttccccctcgagcggcggctgctgcccggctccccggcagctgtgcggg gtctgtgccggagcaggacccgctggcccatcctcgggggctgtcctggccggctcccag cggcagggtccccgtgtgtcccccgggccggcccggcagctctgggctgtccccgcggag gccgatgacagcgggagcgaggagcccggcgcagccttggggagcgggatggagccgcag caggacaatgctggaagggatcctgcaccgcccagccctgcagatctccccgctgggagc cgggggaaggcggcacggcacaggagccgccccgggggcagcctggggaagctgtgggtg acgttcctggagcgccagagcagacagcagcaggattccggggacagcggggagctgtcc ctcgtggagcgcctggagcggctggccaggctcctgcagaaccccatcagacacaccctg gcaccgacagcggctcgggaggagcttcctgaggggtgcacacagggaagggagcggctg aaaatacggctggcaggaggaggcaggtctgggagcggcacggagccccggggaacgcga gcgggacggaggccacaggtgatccaggaggagcccggggcacacaggccgggccagaag gtgatccagcacctgaagacgattctggagcagcagcagcagctgggaattgcgagtgac agctcctcggaggccaggctgagcacagagcccggcggctgcagcagctgcagcacctcg gggtgggacacggggaccccggcggggccggacacctccccggcctctggggacagcagc tccctgtccctggccaccatcgacacggccaggctgctgcgggcctttggggagcacagg ctggggctgggctcacagctgggctcacagcctgtcacacagctgggctcacagctgggc tcacagctggccccacagcctgtcacacagctggccccacagcctgtcacacatctgggc tcacagctgggctcacagcctgtcccacagctggccccacagctgggctcacagctgggc tcacagctggccccacagcctgtcacacagccggccccacagctgtccccagagctgccc ccgaggctggcccagctgtactgtgccatcagccagcagaggagccgctcggagcgctgg gatgaggagagtgaaggagcgggggctgagagcctcgggaaggggcagcagagccagccg gccccacagctgtccccagagctgcccccgaggctggcccagctgtactgtgccatcagc cagcagaggagccgctcggagcgctgggatgaggagagtgaaggagcgggggctgagagc ctcgggaaggggcagcagagccagagcaccatccccttttcctcagactccacttgtgcc agcagcagctcctggggaccgagctctgccctcaggaacaagcgacggccacggatgctg aacaaagggatccaggcagggactcagtggctcgtcccagcagaggacttgaaatgtgac tggaggaaagaaaaccagtccagtgcccttcctggccctgggccagcctggtttgagccc tggagcagcacaaagccctggagagagcccctgcgggagaagaactgggagcagcagccc aggctgggccgggcaggggctggcagggggaagctgacactgcaggaggccctggccctg caccgccccgatttcatctcgcgctcgggacagcgcctgcggcacctgcggctgctccgc gaggagaggaggctgcagaggctctacgagcagctccccgaggtgaggaggaagagggag gaggagcagaggaagctggagtacagctcccaccgcctgcaggctcggctctacagaact aaaatcaccaaccgtgtcctggggaagaaggtgtcctggagctga

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