Parus major (Great Tit): 107199123
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Entry
107199123 CDS
T04864
Symbol
PAN2
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107199123 (PAN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107199123 (PAN2)
Enzymes [BR:
pmaj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
107199123 (PAN2)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107199123 (PAN2)
mRNA degradation factors
3'-5' decay
Pan complex
107199123 (PAN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH_1
PAN2_N
RNase_T
UCH
Motif
Other DBs
NCBI-GeneID:
107199123
NCBI-ProteinID:
XP_033367576
Ensembl:
ENSPMJG00000015612
LinkDB
All DBs
Position
Unknown
AA seq
1139 aa
AA seq
DB search
MTPSRCPVTTPAPFPRHLPGSPISVISQPHPPGDSRRRSHRHSKLSRCPRAPTPLPFPSP
RPGFTMNFEGLNPSLAEFAPPLHPALEPVLDPHLNPSLVELDPEGVSLEGLPVPESVHLM
EGMYSELHTAVSEVGVPVSVSHFDLHEEMLWVGNHGGHATSFFGPTLERYSSFQVNSSDD
IRQIQSLENGVLFLTKTNLKYLSRGGLIIFDYLSSDRRCPVSSHFPWREPCVPPGANSHS
AVPFPLLPGQCQFCEPTGLANPADIFHVNTVGPLIMTFDVSASKQALAFGDSEGCVHLWA
DSPEVTFNAYSRETDFALPCMVDTLPHLDWNQDLVPLSLIPVPLTSDALLSDWPAANSAP
APRRAPPVDPEILRTMKKVGFIGYAPNPRTKLRNQIPYRLKEMDNEFDTFSQVPESPIGR
EEEPHLYRVAKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFL
EPVRCLVQNHLCQKEFCLGCELGLLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILA
DSDEATGKVNLGRLIQSWNRFILTQLHQETQEQEGPQAYRGAGSSSFGSSGDSVIGQLFS
CEMENCSMCRCGKETVRVSSTLLFTLSYPDSTEKPAKDYEFAQILKRSICLEQNTQAWCE
NCEKYQPTVQTRNIRCLPDVLVINCEVNSSKEADFWKTQAEYSFQKAMMKRGGFDITKGK
EIALGEWKDLGNPDTGHSYASVEELKNIWIPHAIKMRLTKSKELDVSNWSESDELSPMDD
PESVYIYDLMATVVHILDSRTGGSLVGHIKVGETYHQRKEGVTHQQWYLFNDFLIEPVDK
CEAVQFDMSWKVPAILYYARRNLNAKYNLVIKNPIEASVLLAEASLARKQRKCHATFIPL
MLNEMPQAGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGVP
FIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDVGVKFVGHG
LQKDFRVINLMVPKDQVIDTVYLFHIPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTA
LQLYRKYLELSPQGSEPEEFRKVLKGLYEKGRKLDWKVPEPDSQSSPKHGAVFPPVLAL
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgaccccttcccggtgccctgtgaccaccccagcccccttcccccggcatctcccggga
tccccgatctccgtgatttcccagcctcatcccccgggcgattcccgccgccgttcccac
cgccattccaagctctcccggtgtccccgagcaccgacccctctcccttttccctcccca
aggccgggattcaccatgaacttcgaagggctcaacccctccctggccgagttcgcgccg
ccgcttcacccggcgctggagccggtgctggacccgcacctgaaccccagcctggtggag
ctggaccccgagggggtgtccctggaggggctcccggtaccggagtcggtgcacctgatg
gaggggatgtacagcgagctgcacaccgccgtctccgaggtcggcgtgcccgtctccgtc
tcccacttcgacctgcacgaggagatgctgtgggttggcaaccacgggggccacgccacc
tccttctttggcccgactctggagcgctactcgtcgttccaggtgaacagcagcgatgac
atccgccagatccagagcctggagaacggcgtcctgttcctcaccaaaaccaacctcaag
tacctgtcccggggcggcctcatcattttcgactacctgtcctccgaccgccgctgcccc
gtgtccagccacttcccgtggcgcgagccctgcgtgccaccaggagccaattcccactct
gctgtcccctttcccctcctgccaggccagtgccagttctgcgagcccaccgggctggcc
aaccccgccgacatcttccacgtcaacaccgtggggccgctcatcatgaccttcgacgtg
tcggccagcaagcaggcgctggccttcggcgactccgagggctgcgtccacctctgggcc
gactctccggaggtgaccttcaacgcctactcccgggagaccgactttgccctgccctgc
atggtggacacgctgccacacctggactggaaccaggacctggtgccgctgtcgctcatc
ccggtgccgctgaccagcgacgcgctgctctccgactggcccgccgccaactccgcgccg
gcaccgcggcgagcccccccggtcgatcccgagatcctgcgcaccatgaagaaggtggga
ttcatcggctacgccccgaaccccaggaccaagctccgtaaccagattccttaccggtta
aaggagatggacaacgagttcgacaccttcagccaagtccccgagtccccgatcgggcgc
gaggaggagccgcacctctacagggtggccaagaagtacaggaaggtcaccatcaaatac
tccaagctggggctggaggattttgacttcaagcattacaacaagacgctgtttgcgggg
ctggagccccacattcccaatgcctactgcaactgcatgatccaggtgctgtatttcctg
gagccagtgcgctgcctggtgcagaaccacctgtgccagaaggaattctgcctgggctgc
gagctgggtttgctcttccacatgctggacctgtcccgaggagacccctgccaggggagc
aacttcctgcgggctttccgcaccatcccggaggcgtcggcgctgggcctgatcctggca
gactcggacgaagccacggggaaggtgaacctggggcggctgattcagagctggaaccgt
ttcatcctgacccagctgcaccaggaaacgcaggagcaggagggaccccaggcctaccgg
ggggctggcagcagcagctttggctcctcgggggactcggtcatcgggcagctgttcagc
tgtgagatggagaactgcagcatgtgtcgctgcgggaaggagaccgtccgtgtgtcctcc
acgctgctcttcaccctctcctaccccgacagcaccgaaaaaccagccaaggattacgaa
ttcgcccaaattttaaagcgcagcatctgcttggagcagaacacgcaagcctggtgtgag
aactgtgagaaataccagcccacggtgcagacccggaacatccgctgcctgccggacgtg
ctggtcattaactgcgaggtgaacagctccaaggaggcagatttctggaagacacaggct
gagtattccttccagaaagccatgatgaagagaggaggcttcgacatcaccaagggaaag
gagatcgctctcggggagtggaaggatctggggaaccccgacacggggcattcgtatgct
tctgtggaggaactgaagaacatttggatccctcacgccatcaagatgaggttgaccaag
agcaaagagctcgacgtgagcaactggagcgagagcgatgagctgagcccgatggacgac
cccgagtccgtgtacatctacgacctgatggccaccgtggttcacatcctggattcccgc
accgggggcagcctggtggggcacatcaaggtgggagagacctaccaccagcggaaggag
ggagtcacacaccagcagtggtacctcttcaacgacttcctcatcgagcccgtggacaag
tgcgaggctgtgcagtttgacatgagctggaaggttccagccatcctctactacgcccgg
aggaacctcaacgccaagtacaacctcgtcatcaagaaccccatcgaggccagcgtcctg
ctggctgaagcctcgctggcccgcaagcagcgcaagtgccacgccaccttcatccccctc
atgctgaacgagatgccccaggcaggagacctggtggggctggacgccgagttcgtcacg
ctgaacgaggaggaggccgagctgcgcagtgatggcaccaagtccaccatcaagcccagc
cagatgtcggtggcccggatcacctgcgtgcgtgggcagggccccaacgagggcgtcccc
ttcatcgatgactacatctccacccaggagcaggtggtggattacctgacccagtactcc
ggcatcaagccaggagacctggatgccaagatctcctccaagcacctgaccaccctcaaa
tccacttacctgaagctgcgtttcctcatcgacgtgggcgtcaagttcgtgggccacggg
ctgcagaaggacttccgtgtcatcaacctgatggtgcccaaggaccaggtgatcgacacc
gtgtacctgttccacatcccgaggaagaggatgatctccctgcgcttcctcgcctggtac
ttcctggacctgaagatccagggggagacccacgacagcatcgaggacgcgcggacggcg
ctgcagctgtaccgcaagtacctggagctgagcccgcagggctcggagcccgaggagttc
cggaaggtgctcaaggggctctacgagaagggccgcaagctggactggaaggtgcccgag
cccgacagccagagcagccccaagcacggggccgtgttcccccccgtgctggccctgtga
DBGET
integrated database retrieval system
