Parus major (Great Tit): 107199227
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Entry
107199227 CDS
T04864
Symbol
IRX4
Name
(RefSeq) iroquois-class homeodomain protein IRX-4
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaj03000
]
107199227 (IRX4)
Transcription factors [BR:
pmaj03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
107199227 (IRX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MCM_bind
SID-1_RNA_chan
Motif
Other DBs
NCBI-GeneID:
107199227
NCBI-ProteinID:
XP_015472055
Ensembl:
ENSPMJG00000013824
LinkDB
All DBs
Position
2:complement(87834952..87844871)
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AA seq
500 aa
AA seq
DB search
MSYPQFGYPYSSAPQFLMSTNSLTTCCESSSRTLAETGAAASAQTPVYCPVYESRLLATA
RHELNSAAALGVYGGPYAGPQGYGNYVTYGTEAPPFYSLNSLDAKDGSGSAHAGIAPAAA
YYPYDHTLSQYQYDRYGTMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKCSDEKRPYEEEEEEEEESSQEEAMKSGK
AEEPTGKEEKELELSDLEDLDAAESESSECELRRPFPHPLPHPHPLPLPGGSHPPRAAEL
PAKMPPPPAAAGDDEEEEEEAAAAERARSCLKTAAEECGPDPLGARQRGCESKMCFQQGQ
QLLEAKPRIWSLAHTATSLNQAEYPSCMLKRPGGSAAAAAPAPGSVMDRHQDSPVTNLRN
WVDGVFHDPLFRHSTLNQALSNTTVSWATTKGAILETGALGRAVGNGANVLKGQLSNLAH
HDSNKEFLAFPKSGSKMFCS
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagtttggctacccttactcctctgcaccccagttcctgatgagcacc
aactccctgacgacctgctgcgagtccagcagccggacgctggctgagacgggggcagcc
gcctccgcccagacccccgtgtactgcccggtgtacgagagccgcctgctcgccaccgcc
cgacacgagctcaactccgccgccgccctgggggtctacggcggaccctacgccgggccc
cagggctatggaaactacgtgacctacggtaccgaggctccccccttctactccttgaac
agtttggatgcgaaggacgggagcggctctgcgcatgcgggcatcgccccggcggctgcc
tactacccctacgatcacaccctcagccagtaccagtacgacaggtacgggacgatggac
ggcgggacgcggagaaaaaacgctacccgagagacgactagcacgctgaaggcctggctg
caggagcaccgcaagaacccctaccccaccaagggcgagaagatcatgctggccatcatc
accaagatgaccctcacccaggtctccacctggttcgccaacgcccgccggcggctcaag
aaggagaacaagatgacctggcctccgcggaacaagtgctctgatgagaagcggccctat
gaggaagaggaggaggaggaggaggagagctcgcaggaagaggcgatgaagagcgggaaa
gccgaggaacccacgggcaaggaggagaaggagctggagctcagcgacctggaggacttg
gacgccgccgagtcggagagctcggagtgcgagttgaggcggcccttcccgcatccgctc
ccgcatccgcacccgctcccgctcccgggcggcagccacccgcctcgggccgcagagctc
cccgccaagatgccgccgccgccggccgccgccggggacgacgaggaggaggaggaggag
gcggctgcggcagagcgggcgcggagctgcctgaagacggcggcggaggagtgcggcccc
gacccgctgggcgctcggcagcgcggctgcgagtccaagatgtgcttccagcaggggcag
cagctgctggaggcgaagcccaggatttggtccctggcgcacactgccacctccctcaac
caggccgagtacccctcctgcatgctgaaaaggccggggggctcggcagccgccgccgct
cccgccccgggtagcgtcatggacaggcaccaggattcgccggtcactaacctcaggaac
tgggtggacggggtgtttcacgatcccctgttcaggcacagtactttaaaccaagccctg
agcaacacgacagtttcctgggctaccaccaaaggagccattctggaaacgggcgccttg
ggacgcgcggtggggaacggcgccaacgtgctcaaggggcagctctcaaacctggcccac
catgactcaaacaaagagtttctggcgtttcccaaatcaggaagcaaaatgttttgttcc
taa
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