Parus major (Great Tit): 107199343
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Entry
107199343 CDS
T04864
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04120
Ubiquitin mediated proteolysis
pmaj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107199343 (SYVN1)
04120 Ubiquitin mediated proteolysis
107199343 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmaj04121
]
107199343 (SYVN1)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107199343 (SYVN1)
Ubiquitin system [BR:
pmaj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107199343 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
Colicin_V
zf-Nse
zf-RING_Vps41
zf-C3H2C3
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
107199343
NCBI-ProteinID:
XP_033367650
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MLCTALVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFVSVGSRENSSKTSPKPPKTNPKITQNLPETSPKITWLIKVLLYMAFMTIMIKVH
TFPLFAIRPMYLAMSGAAGAGCPTQRCCRPQYAILMTMVLTIFIKYVLHSIDLQNDNPWD
NKAVFMLYTELFTGSGAPGGAGGVVLVVFNWSWLGNEDSKSWWAQLVFTGQRRLKVLVVF
NWFWLVNQNSKSWILGPAVAVADIPEVSRRRYPDATAEELQAVDNVCIICREEMVTGAKR
LPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQPPPEPPAPAPPPPGPQPPHLPQG
ILPPFPPGMFPFWPPVGPFPPVPGVQAPAGTD
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcacggcgctggtgatggccgggagcctggcgctcaccacggccgtggtggcc
cacgcctactacctgaaacaccagttctaccccaccgtggtgtacctcaccaaatccagc
cccagcatggccgttctgtacatccaggccttcgtgctggtgttcctgctgggcaagttc
atgggcaaggttttcttcgggcagctgcgcgcggccgagatggagcacctcctggagcgc
tcgtggtacgcggtgaccgagacctgcctggccttcaccgtcttcagggacgacttcagc
ccgcgcttcgtcgccctcttcaccctcctcctcttcctcaagtgcttccactggctggcc
gaggaccgcgtggattttgtgagtgttgggagtagggagaacagctcaaaaacatcccca
aaaccccccaaaaccaaccccaaaataacccagaacctgcctgaaaccagcccaaaaata
acctggctgatcaaggtgctgctctacatggccttcatgaccatcatgatcaaggtgcac
accttcccgctcttcgccatccgccccatgtacctggccatgagcggcgcggccggggcg
ggatgtcccacgcagcgctgttgccgtccccagtacgccatcctgatgaccatggtgctg
accatcttcatcaagtacgtgctgcactccatcgacctgcagaacgacaacccctgggac
aacaaggccgtcttcatgctctacacagagctcttcaccggtagcggcgcgccggggggg
gctgggggggttgtcctggtagtgttcaactggtcctggttgggcaacgaggactcgaag
tcttggtgggctcagttggtcttcactggtcaacgaagactcaaggtcctggtagtgttc
aactggttctggctggtcaaccaaaactcaaagtcttggattttgggcccagccgtggct
gttgccgacattcccgaggtttcccggcgcaggtatcccgacgccacggccgaggagctg
caggccgtggacaacgtgtgcatcatctgccgcgaggagatggtgacgggcgccaagcgc
ctgccctgcaaccacatcttccacaccagctgcctgcgctcgtggttccagcggcagcag
acgtgccccacgtgccgcatggacgtgctgcgagcctcgctgccggcacagccgcccccg
gagccaccggcaccggcaccgcccccgccggggccacagcccccgcaccttccccaggga
attctccctcccttcccgccgggaatgttcccgttctggccgcccgtggggccgttcccg
cccgttcccggtgtccaggccccggccggaactgac
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