Parus major (Great Tit): 107199721
Help
Entry
107199721 CDS
T04864
Symbol
NPHP3
Name
(RefSeq) nephrocystin-3
KO
K19360
nephrocystin-3
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmaj03037
]
107199721 (NPHP3)
Cilium and associated proteins [BR:
pmaj03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
107199721 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
NPHP3_hel
TPR_12
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
TPR_19
TPR_17
NPHP3_N
TPR_11
NACHT
AAA_16
KAP_NTPase
AAA_22
AAA_19
DUF2225
14-3-3
ATPase_2
AAA_14
Viral_helicase1
T2SSE
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
107199721
NCBI-ProteinID:
XP_015472600
Ensembl:
ENSPMJG00000010130
LinkDB
All DBs
Position
2:complement(43094267..43118791)
Genome browser
AA seq
1317 aa
AA seq
DB search
MGTASSLVSPAGAVGEVIEDTYGGGGGEACEIPVEVKPKARLLRGSLRRVGGSRPGGLIG
ASFKSTASVQELECVAEYERLRKEYEIFRVSKNNEVASMVKKEAKLDRENKRLRAELQAL
QKTYQKILREKESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKENEIQDLLRAKREL
EAKLQRLQAQGIQVFDPEESDSDDNCTDVTAAGAQSEYWNGGVLGSEPSMGSMMQLQQSF
RGPEFAHSSIDVEGPFANINRDDWDAAVASLLQVTPLFSHSLWSNTVRCYIISTDETQPE
VTIFIRNYSPKLQRVCETMGYFFQVVSFSTENERPLQDVRRWEIEKSSLVILLLHLTLPS
CLLEDCEEAFLKNPEEKPRLIYHRREDGRVSSVSVQQLIEQISCMNKAKMIDHVGGVEEG
AYEIYNCVEKIIKQDILGCEITDLEGKDLGSKEDSTAPEEEVFGDVLWDAHDEQEQMEAF
QQASNSTCELGFEKYFERLNDLVAAPAPIPPLLVSGGPGSGKSLLLSKWIQLQQKHSPNT
LILYHFVGRSMSTSSESALIIKRLTLKLMQHSWLVSPLTFDPAKLLEEFPHWLEKLSARH
QGSIIIIIDSIDQIQQAEKHMKWLIDPLPVNVRVIVSVNVETCPQAWRLWPTLHLDPLNS
KDVKSLISAECNSANVKLTKEQEKKLERHCRSATTCNALYVTLLGKIIACVGNTGDIDEI
LQQCCQCQDTVSLYRLVLRSIQESLQSDKEKGLLREMLCVIGVSHNGVSESELMELYPEL
TSEVLASLLHSLHKMRLLTYGCGLLKFQHLQAWEMVKLEYMEAGENVISAYRQKLVEYFT
MQLSQDRVTWRSADELPWLFQQQGDKQKLHKCLLNLFVSQNLYKRGHFAELLSYWQLVGK
DKSSMAAEYFDSLKEYEKSSEGEESMICLSDLYETLGQFLKDLGLLSQAVAPLQRSLEIR
ETALDPDHPRVAQSLHQLAGVYVQWKKFGNAEQLYKQALEISENAYGAEHPRVARELDAL
ATLYQKQNKYEQAEQLRKKSFKIRQKAARQKGSLCGFALLRQRALQLEELTLGKDTPDNA
RTLNELGVLYYLQNNLETAELFLKRSLEMRERVLGSNHPDCAQSLNNLAALYNEKKHYDK
AEELYEKALDIRKRALAPDHPSLAYTVKHLAVLYKKMGKLDKAVPLYELAVEIRQKSFGP
KHPSVATALVNLAVLYCQMKKQIEALPLYERALKIYEDSFGQMHPRVGETLKNLAVLSYE
RGDFEKAAELYKRAMEIKEAETLLIGGKATSRHSSSGDTFSLKSALSPNAFPEHGQR
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgggcacggcgtcgtccctggttagcccggcgggcgcggtcggggaggtgatcgaggac
acgtacggcggcggcggcggcgaggcctgcgagatcccggtggaggtgaagcccaaggcg
cggctgctgcggggctccctgcggcgcgtcggcggctcccggcccggcggcctcatcggg
gccagcttcaagtcgacggcctcggtgcaggagctggagtgcgtggccgagtacgagcgt
ctgaggaaggagtacgagatcttccgcgtcagcaagaacaacgaggtggcctccatggtg
aagaaggaggccaagctggacagggagaacaagcggctgcgcgccgagctgcaggcactt
cagaaaacataccagaaaatattgagagagaaagaaagtgcattagaagctaaatatcaa
gccatggagagagctgctacttttgaacatgatcgagacaaggtcaaaaggcaattcaag
atttttagagaaactaaagaaaatgagattcaagacttactgagggccaaacgagagctc
gaagcaaaactccaaagactccaggcccagggaatccaagtatttgatcctgaagagtct
gattctgatgataattgtacagatgttacggctgctggggcgcaatctgaatactggaat
ggaggagtgttgggaagtgagccatccatgggtagtatgatgcaacttcagcagtctttc
agagggcctgaatttgctcatagctctatagatgtcgagggaccatttgcaaatataaac
agagatgattgggatgctgctgttgccagtttattgcaggttactcctctgttttcccac
tctttgtggagtaatacagtaagatgttatattatcagtactgatgagactcagccagaa
gtgactatcttcattagaaactactctccaaaacttcaacgagtctgtgaaacaatgggg
tacttctttcaagttgttagtttttcaacagagaatgaaaggccccttcaggatgtaaga
agatgggaaattgaaaaaagttcattagtcattttgctcctgcatttaactttgccaagt
tgtttgttggaggactgtgaagaagccttcttgaaaaatccagaagaaaaacctcggtta
atttaccacagaagggaggatggcagagtcagttcagtctcagtgcaacagttaattgag
caaatttcttgcatgaacaaagcaaagatgattgaccatgtcggaggtgtggaggaagga
gcatatgaaatctataattgtgtggaaaaaataattaaacaggatatattggggtgtgaa
attacagacctagaaggcaaggatttgggtagtaaggaagactccactgctcctgaagaa
gaagtttttggtgacgttttgtgggatgcacacgatgaacaagagcagatggaagctttt
caacaggcctctaattcaacatgtgagctgggatttgagaaatattttgaacgtctgaat
gacctagtagctgcaccagcaccaattccaccattgcttgtatcaggaggaccaggctct
gggaaatctctccttctatcaaaatggattcaattacagcagaagcattcaccaaacact
ctaattctttaccactttgttgggaggtccatgtctactagttcagaatctgcattaata
attaagcgccttactctaaagcttatgcaacactcttggttagtatcacctctgactttc
gatccagctaaacttctggaagagtttccccattggctggaaaaactttctgcacgccat
caaggcagcattattataattattgactctattgaccaaatacagcaagctgagaaacat
atgaagtggttgatagatccactgccagtgaacgtgagagtgattgtatcagtgaatgta
gaaacatgtccgcaggcgtggaggttatggcccactcttcatcttgatccactgaattcc
aaagatgttaaatctctcattagtgcagaatgtaactcagcaaatgttaaattgactaaa
gagcaggagaagaagcttgagagacactgtcgttccgccacaacttgcaatgctttgtat
gtcactctcttgggcaaaatcattgcttgtgttggaaatacaggagatattgatgagatt
cttcagcagtgttgccagtgtcaagacacagtgtcactgtacaggcttgttctgagatca
attcaggaatcattgcagagtgacaaagagaaaggtcttttgagagagatgctgtgtgtc
attggtgtcagccacaatggggtgagtgagtcagagctgatggagctttatcctgagctg
acttctgaagtgctggcctcacttcttcacagcctgcacaaaatgcgtctgctgacatat
ggctgtggtttgctgaagttccagcacctccaggcttgggagatggtaaaactagagtat
atggaagcaggtgaaaatgttatttctgcctatagacaaaaactagtggagtatttcacc
atgcagttaagtcaagaccgagtgacttggagaagtgcagatgaacttccctggctcttc
caacagcagggtgataagcaaaagctacacaagtgtcttttgaatctctttgtgtcccaa
aacctttacaaaaggggacattttgcagaattgctgagttactggcagctggttgggaaa
gataagagctctatggcagctgagtattttgactctctgaaagaatatgaaaaaagcagt
gagggagaggaaagtatgatctgcctgtctgatctttatgagaccctgggacagtttctt
aaggacctaggtctgctcagtcaggctgtagctcctctgcagcgttctctggagattcga
gagaccgcgctggatccagaccacccaagggtggcacagtcactccaccagctggcagga
gtgtatgttcaatggaagaagtttggaaatgctgaacagctgtataagcaggcactggaa
atctctgaaaatgcctatggagctgaacaccctcgggtggcccgtgagcttgacgcactt
gcaaccctataccaaaagcagaacaaatatgaacaagctgagcagctgaggaaaaagtcc
ttcaaaatacgccaaaaagcagcaaggcagaaaggcagtctgtgtggctttgctctcctg
cgtcaaagagccctgcaactggaggagctcacgttaggcaaggatacaccagataatgct
cgaaccctcaatgagcttggagtcctctactacctgcagaataatcttgagacagcagag
cttttcctgaagcgctccttggaaatgcgagagcgagtcctgggatccaaccacccagac
tgcgcgcagtctttgaacaacctggcagccttgtacaatgagaagaagcactatgacaag
gctgaagagctctatgagaaagctttggacatcaggaagagagccttggctccagatcat
ccctccttggcttatactgtgaaacacctggcagtgctgtacaaaaagatgggaaagctt
gacaaggctgttcctctgtatgagctagcagttgaaattcgacagaagtcatttggccca
aaacacccaagtgtagcaactgctctagtaaacctggctgtcctttactgtcagatgaaa
aagcaaattgaagctttgcctctctatgaacgcgcactgaagatttatgaagacagcttt
ggccaaatgcatcctcgcgtgggggaaacactgaaaaacttggctgtgctaagctatgaa
aggggagactttgagaaggcagctgaactttacaagagagctatggaaataaaagaagca
gaaactttgttgataggtggaaaagcaacttctcgacactcatcaagtggagacacattc
agcttaaaaagtgcattatcaccaaacgctttcccggaacatggacaaaggtga
DBGET
integrated database retrieval system
