Parus major (Great Tit): 107199727
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Entry
107199727 CDS
T04864
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pmaj00535
]
107199727 (COL14A1)
Proteoglycans [BR:
pmaj00535
]
Extracellular matrix (ECM) proteoglycans
Others
107199727 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Fn3_VIN3
VWA_3
Motif
Other DBs
NCBI-GeneID:
107199727
NCBI-ProteinID:
XP_015472616
Ensembl:
ENSPMJG00000011254
LinkDB
All DBs
Position
2:138020051..138134589
Genome browser
AA seq
1886 aa
AA seq
DB search
MFCRYKIQSCSLLAFLAVTAFFISDVQGQVSPPTRLRYNVVSPDSVQISWKAPKGQFTGY
KLLVTPSSGGKTNQLILQNTATKAIIQGLIPDQNYALQIIAFNEDKESKPAQGQFRIKDI
ERRKDTSKSKVKDPEKTNASKPAPEGSLFTCKTPAIADIVILVDGSWSIGRFNFRLVRLF
LENLVSAFNVGSEKTRVGLAQYSGDPRIEWHLNAYGTKDAVLDAVRNLPYKGGNTLTGLA
LTYILENSFKPEAGARPGVSKIGILITDGKSQDDVIPPAKNLRDAGIELFAIGVKNADIN
ELKEIASEPDSTHVYNVADFNFMHTIVEGLTRTVCSRVEEQEKEIKGTIASLGTPSDLVT
SEVTARGFRVSWTHAPGKVEKYRVVYYPTRGGQPEEVVVDGSVSTAVLKNLMSLTEYQIA
VFAIYSNAASEGLRGTETTLALPMASDLQLYNVSQSSMRVRWSGVVGATGYMILYAPLTE
GLAADEKEIKIGETSTDLELDGLLPNTEYTVTVYAMFGEEASDPLTGQETTLPLSPPANL
RFSDVGHNSAKLSWDPASKNVNGYRIMYVKTDGTETNEVEVGRVSTHSLKSLAPLTEYTV
AIFSLYDEGQSEPLTGSFTTKRVPAPQHLEIDEASTDSLRVSWKPTSPDIAFYRLAWIPL
DGGESEEVVINGDADSHVIEGLLPDTEYEVSLLAVFEDDSESEVVAILGATSASATTVPT
TVATTSATTPEPTTAVFRTGVRNLFIDDETTSSLRVTWDISDYSVQQFRVTYLTAEGDRA
EEAVRMVMVPGRQNTLLLHPLLSDTEYKVTITPIYPDGEGVSVSAPGKTLPLSAPRNLRV
SDEWYNRLRISWDAPPSATMGYRVVYKPVNSPGPALETFVGDDINTILILNLFSGTEYSV
KVFASYSTGFSDALTGVAKTLYLGVTNLDSYQVRMTSLCAQWQLHSHATAYRVVIESLEG
GKKREVNLGGGTSRHCFFELMPGTKYKISVHTQLQELEGPAVSIMETTLPFPTQPPTTPS
TPPPPPTIPPAKEVCKAAKADLAFLVDGSWSIGDDNFNKIINFLYSTVGALDKIGPDGTQ
VAIIQFSDDPRTEFKLNAYKTKETLLEAIQQIAYKGGNTKTGKAIKHAREMLFTGESGMR
RGIPKVLVVITDGRSQDDVNKVSREMQLDGFTFFAIGVADADYSELVNIGSKPSERHVFF
VDDFDAFIKIEDELITFVCETASATCPLVVKDGNNFAGFKMMELFGLVEKEFSAVEGVSM
EPGTFNVFPCYRLHKDALVSQPTKYLHPEGLPSDYTITFLFRILPDTPQEPFALWEILNE
AYEPLVGVILDNGGKTLTFFNYDYKGDFQTVTFEGPEIRKIFYGSFHKLHVVISKTTAKI
IIDCKEVGEKTINAAGNISSDGIEVLGRMVRSRGPRDNSAPLQLQMFDIICATSWANRDK
CCELPGLRDEENCPALPHACSCSEANKGPLGPPGPPGGPGVRGAKGHRGDPGPKGPDGPR
GEIGVPGPQGPPGPQGPSGLSIQGLPGPPGEKGEKGDLGFPGLQGVPGASGSPGRDGAQG
QRGFPGKDGPTGPQGPPGPMGIPGAPGVPGVTGSQGPQGDVGAPGPPGAKGERGERGDLQ
SQAMVRAVARQVCEQLIQGHMARYNSILNQIPSQSVSTRTIAGPPGEPGRPGAPGPQGEQ
GSPGMQGFPGSPGQPGRPGERGLPGEKGEKGNPGVGTQGPRGPPGSTGPPGESRTGSPGP
PGSPGPRGPAGHTGSPGSQGPAGPPGYCDPSSCAGYGMGGGYGEPTDQDIPVVQLPHNSY
QIYDPEDLYDGEQQPYVVHGSYPLPSPYSQSYPSPHLAQPEFTPVQEEMEAVELRSPGIS
RFARRIAKRSAKTPVRTKANRKSPSQ
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atgttttgtcgatacaagatacagagctgttctctcttggcttttctagctgtcacagct
tttttcatcagtgatgttcagggccaagtgtctccaccaacaagactaagatataatgta
gtgagtcctgacagtgtacagatctcttggaaagcccccaaagggcagttcactggatat
aaacttcttgtcactccaagttcaggtggaaaaacaaatcaattaattcttcaaaatact
gcaaccaaagcaattattcaaggtctcattccagatcaaaattatgcccttcagatcatt
gcattcaatgaagacaaggagagtaagccagcacaaggccagttcagaattaaagacata
gagagaagaaaagacacaagtaaatccaaggtgaaggatccagaaaaaacaaatgcgagt
aaaccagctccagaagggagcctgtttacctgtaaaactccagcaattgcagatattgtg
atactagtagatggttcttggagtattggcagattcaatttcaggctcgttcgactgttc
ctggaaaatctggtttctgcttttaatgtggggtctgagaaaacaagagtaggtcttgca
cagtacagtggtgatccccggattgaatggcacttgaatgcctatggcacaaaggatgct
gttttggatgcggtccggaatctaccgtacaagggagggaatactttaacaggtcttgcc
ttaacttatattttggaaaacagctttaagcctgaggcaggtgcaagacctggagtatct
aaaattgggatactgatcactgatgggaagtcccaagatgatgttatccctcctgctaaa
aacctgcgggatgctggcattgagctgtttgctattggtgtaaagaatgcagatataaat
gaactcaaagagattgcctctgagcctgacagcacacatgtctacaacgtggctgacttt
aacttcatgcataccatagttgaaggtcttaccagaacagtgtgctcacgagtagaggag
caggaaaaggaaatcaaaggaacaattgcttctcttgggactccttcagatttggtcaca
tcggaggtaacagcaagaggcttccgcgtcagctggacccacgctccaggcaaagtggaa
aaatacagggttgtgtactaccccactagaggaggacagccagaagaggttgtggtagat
ggaagtgtatccacagcagttctgaaaaacctgatgtctttaactgagtaccagatagct
gtgtttgccatctactccaacgctgcgagcgagggcctccgtggaacggaaaccacactt
gccctgccgatggcgtcggatctgcagctgtacaacgtgtcccagagcagcatgagggtc
aggtggagtggagtcgtgggtgccacagggtacatgatcctctatgctcccctcacagaa
ggactggcagcagatgagaaggagataaaaattggggagacctcgacagatcttgaactg
gatggactcttgccaaatacagaatatacagtcacagtttatgccatgtttggagaagaa
gctagtgatccccttacaggacaagaaactacattgcctctaagtccaccagcaaacttg
agattttctgatgttggacataatagtgctaagctatcgtgggatcctgcttccaaaaat
gtaaatggctatcgcatcatgtacgtaaaaacagacggaacagaaaccaatgaggtggaa
gttggtcgtgtttcaacccattctctgaaaagtttggcaccccttacagagtatactgtt
gctattttctccctgtatgatgagggacaatctgaaccacttactggcagctttaccaca
aaaagagttccagctccccagcatttggaaattgatgaagcatcaacagatagcctcagg
gtcagctggaagcccacctcaccagatattgctttttatagattggcatggattcctttg
gatgggggggaatctgaggaggttgtcataaatggagatgcagacagtcatgttatagag
ggtctgttgcccgacacagaatatgaagtttctctgctggcagtttttgaagatgacagt
gaaagtgaagttgttgctattcttggagctacatctgcaagtgctaccacagtacctacc
acggtggccaccaccagtgccaccacccctgagcccaccacagcagttttccgaacagga
gtcagaaacctttttatagatgatgaaacaacctcaagtctgagggtgacatgggacatt
tctgactacagtgttcagcagttccgagtgacctatctcactgcagaaggtgaccgtgct
gaggaggcggtaagaatggtaatggtgcctggcagacaaaacactcttctgcttcaccct
ctgctgtctgatacagagtacaaagttaccataacccccatctatcctgatggggaagga
gtcagtgtctcagctcctggaaaaactttgcccctgtctgctcctaggaacttacgtgtc
tcagatgagtggtacaacagattacgtatcagctgggatgccccaccttcagcaacaatg
ggttacagagttgtctacaaacctgtcaactctcctggccctgcattggagacctttgta
ggggatgatattaataccatactcattctaaatctcttcagtggaacagagtacagtgtc
aaagtatttgcttcatactcaacaggcttcagtgatgccctaacaggcgtggccaaaacc
ttgtatctgggtgtgacgaatttggactcctaccaagtccgcatgacaagtctgtgtgct
cagtggcagctccacagtcatgctactgcttacagggtagttatagagtcacttgagggt
ggaaaaaagcgagaagtaaatcttggtggagggacatctagacattgcttctttgagctg
atgcctggaaccaaatataaaatcagtgttcatacacagcttcaggagctggagggccct
gctgtgagcatcatggagacaacgttaccatttcctactcaaccaccaacaacaccttca
acaccacctccaccacctacaatcccacctgcaaaagaggtgtgcaaagcagccaaagct
gatctggcattcctggtagatgggtcatggagtattggagatgacaatttcaataagata
attaactttctctatagcactgttggagctttggataagattggtcctgatggaacacag
gtggcaataattcagtttagtgatgatcccaggacagaatttaaattgaatgcatacaaa
acaaaagagactcttcttgaagctattcagcaaatagcctacaaaggaggaaatacaaaa
acaggcaaagccattaaacatgcacgagaaatgttatttacaggagagtcaggcatgaga
aggggcatcccaaaggttttggttgtcattactgatgggcgatcacaggatgatgtgaac
aaagtctccagagaaatgcaactagacggttttaccttttttgctattggagtggctgat
gctgactattcagagttagttaatattggcagcaagcccagtgaaagacacgtcttcttc
gtggatgactttgatgcatttataaagattgaagatgagctcatcacttttgtttgtgaa
actgcatcagcaacctgcccactggtagttaaagatggcaataattttgcaggatttaaa
atgatggaactgtttggtttggttgaaaaggagttttcagctgtggaaggggtgtccatg
gaacctggtacatttaatgttttcccatgttacagactgcacaaggatgctctggtgtcc
cagcctaccaagtatttgcatcctgaaggtctcccttctgattacaccatcacctttctc
ttccggatactcccggacacaccacaggagccatttgctctctgggagattctaaatgaa
gcatatgaacctctggttggagttattttagataatggtggaaaaactctgactttcttt
aactatgactacaaaggagattttcaaactgtaacttttgaaggtcctgaaataaggaag
attttttatgggagtttccataagttacatgttgttatcagcaagaccacggccaagata
attattgactgcaaggaagtgggtgagaagaccattaatgcagcagggaacatcagttct
gatggcatagaagtgctggggaggatggtgagatccaggggaccaagagacaactctgca
ccgctgcagttacagatgtttgacatcatttgtgctacctcatgggccaatcgagacaaa
tgctgtgaacttcctggcttgagagacgaggaaaattgccctgcccttcctcatgcttgt
tcctgttcagaagccaataaaggtccccttggacctcctggaccaccgggtggtccaggt
gtcagaggtgccaaaggtcatcgtggtgatccaggtccaaagggaccagatggacctcga
ggtgaaattggtgttcctggaccacaaggacctccaggaccacaaggacccagtggactt
tctattcaagggcttccagggccaccaggtgaaaagggagagaagggagatcttggtttt
cctggcctgcagggtgtcccaggagcatcaggttcaccaggaagagatggagctcaaggt
caaaggggctttcctggcaaggatggacccacaggcccacaaggacctcctggcccaatg
ggcatacctggtgctccaggtgttccaggtgttactggaagtcaggggccacaaggtgat
gttggagctcctggccctcctggagctaagggtgaaaggggtgaacggggtgatctccag
tcccaagccatggtccgggctgttgctcgtcaagtgtgtgaacagctcatccaaggtcat
atggcaagatataactcgattctgaaccagattccaagccagtctgtctcaacacgaacc
attgctggacctcctggtgagccaggtcggccgggggctccagggccacagggtgagcaa
ggatcgccaggcatgcaagggtttccaggaagccctggtcaaccaggaagaccaggagaa
agaggtttaccaggtgagaaaggagaaaaaggcaatccaggtgttggaacacaaggaccc
cgaggcccaccaggatccacaggacctccaggagaaagtcgaactggcagcccgggacca
ccaggatctccaggtccgagaggtcctgctggtcacacgggatcgccgggctcccagggt
cctgctgggcctccagggtactgtgacccatcctcctgcgctgggtacggcatgggaggt
ggatacggtgagccaactgatcaagacatcccagtagtgcagttgccacataactcctac
caaatctatgaccctgaggacctttatgatggtgagcaacagccgtacgtagttcacggg
tcctaccccttaccatccccatactcccagtcctatccatcacctcatcttgctcaacca
gagtttactcctgttcaagaagagatggaggccgttgagctgagatccccgggaatcagt
cgcttcgcaaggaggatagccaaaaggagcgccaagaccccggtacgcacaaaggcgaac
agaaaaagcccctctcaatga
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