Parus major (Great Tit): 107199761
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Entry
107199761 CDS
T04864
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03013
Nucleocytoplasmic transport
pmaj03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107199761 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107199761 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107199761 (NUP153)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107199761 (NUP153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Phage_cap_P2
Motif
Other DBs
NCBI-GeneID:
107199761
NCBI-ProteinID:
XP_015472709
Ensembl:
ENSPMJG00000018241
LinkDB
All DBs
Position
2:complement(62458854..62503464)
Genome browser
AA seq
1453 aa
AA seq
DB search
MASGGSGGGGGKIRTRRHHLGAAKPPYARGKQQLGLLSRVTESVKNIVPGWLQKYFNKRE
DKCVDMNESASEEENPVNYHHDYANEDAMVIDGRVTPESARINLEEPSTSRSALNFSDVL
TRPSLHRSHLNCTVLDSTVPHCQPSTSSTLGIGSPGLSLVKEIKDSTSQHDDDNISTTSG
FSSRASDKDITVSKNTSAPLLWSPEAERSHSLSQHPASSSKKPSFNLSAFGSPSPSLGNT
SVFKTRQLGDSPFYPGKTSYGGAAAAARQTKVQISAYQPPIKRQMKAKQANVQSYGVTSS
TARRILQTLEKMSSPLADAKRIPSSVSSPLSSPVDRSVLNVTGFQSRQNQMDSQHPPVQK
LVTPKPISLTGSRITYFKPSLKSATNSRKIHQRVDTDHQDMIDKSFPAEKPVKSSESNLS
YPKLDTPASNGLSSGGRMGSVCGKMRRERERYCASRPGQKQQLEMEQEELPEVPLPISTA
SLPTFSFSFPASSAVSSSPSIVSKAVMNKVQPASNVGSPTFVFSSPIVKSTEVEVLPPLS
QIKFTFSVPVVKSSELSGSTDTPVTSILSPGSATVNSTSNKKEEEEEYDGFCKPAKFLKQ
GSVLDILKSPGFMSGKSPSCSSAQPVTSTVVYTRPAISNFSAGKNTSKQASSFWQSDTHD
PCLQNKTTDGNCVTCEAAKVSTVESTKQTVSVSPCVSSKTAVPTAGTLGFEDKFKPAPNT
WDCDTCLVQNKPEATKCIACDTPKPGTGVMPALTMPMVTDNSVTVTSTTSSTGTTVTLGF
GDKFKQPKGSWNCSVCLVQNKAEDSKCVACQSEKPGSSVPVTSSSVSAFSASSGGFLDLD
KFKKPEGSWECEVCLVQNNAEATKCIACQNAKPGTKAELKGFGTATVSTNAAAPSFTFGV
PSSSSESSQTLGSTGNFKFGEQSSFKFGIASESASSSTVTGGFKFPAASGNFKFGVSSSD
SKSEDSKKESKSNSFTFGLPSTSSQAPTTFQFGTTSLGQQEKKEEPVLGGFGFATSSTSS
IATNETKTGVGGFTFGTMAEKDAASPALPFKKSDEKKDETVSTKGGFSFSSVESAPASQF
VLGRTEEKQDSVTSAGPLAFGKKADNEELKAQPIFSSGTAEHTKEESTAKPVFNFSFGKP
SEKESEQAKAPFAFGAPTSTCDQGASFSFLSSSSSSTVVPTTSANSSSVFGSTLSSSNPQ
PVPTPFVFGQPSNTVTSSVFGNPAESATSQSFGFSQENKPATTSSSAGSTLTPFLFASGE
SSTNAANSGFTFGATTTSGSTGSSSSFLFGSGPPAPAAGPAFGASQPPAFGPSPGSGQQS
APSFGSLSTTLFSPGSQPAPSAFGSVTSSTQPSVFGQQAANQPTFGSGTPSAGSVFRFGS
STTNFSFPNNPGVFTFGANPPAPAAPAPPSGTSGFSFNQPPAFTVGTNGKNVFSASGSSV
AGRKIKTAVRRRK
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggtggcagcggcggcggcggcggcaagatccggacccgacggcaccacctg
ggagccgcgaagccgccctacgcgaggggcaagcagcagctggggctccttagcagagtg
actgaatcagtgaaaaacattgtaccaggatggttgcagaagtatttcaataaaagggaa
gataaatgtgtagatatgaatgagtctgcaagcgaggaagagaatccagtaaactatcac
catgattatgcaaatgaagatgccatggtaattgatgggagagtcacgcctgaatcagca
agaattaatttagaagagccatccacgagcaggtctgcgctgaacttctcagatgtgtta
acaaggccctcccttcaccggagccatttgaactgcaccgtgttggattccacagtccca
cactgtcagccctccacatcttccacgcttggcattggcagtcctgggctgtccctcgta
aaggaaataaaagattctacctctcagcatgatgacgataacatctcaacaaccagtggc
ttctcctctagagcatctgataaagatatcacagtttcaaaaaatacttcagcaccactg
ctctggtccccagaggctgaaagatctcattccctctcacaacatcctgcatctagctct
aaaaaaccttcattcaatttatctgcttttggatctccctctccttcacttggaaacact
tctgtctttaagacaagacagcttggggattctccattttaccctggaaagacctcttac
ggtggtgcagctgcagcagcaaggcagacaaaagtacagatttctgcttaccagccacca
ataaaaagacaaatgaaagctaaacaagcaaatgtgcaatcctatggtgtgacaagttcc
actgcgcggcgcatcttgcagacattggagaagatgtcaagccctttggcagatgctaaa
aggattccatcttctgtttctagtccactgtcttctcctgtggacagaagtgtgctgaat
gtgactggcttccaatccagacaaaaccagatggattcgcaacatccacctgtgcagaaa
cttgtgacaccaaagccaatctccctgacagggagtcggattacgtattttaaaccatct
ctgaaatcagctactaattccagaaaaattcaccaaagggtagatacagaccatcaagac
atgatagacaagagttttcctgcagaaaagcctgtaaaatcatctgaaagcaatttgagc
taccccaaacttgatactcccgcatccaacggtctgtcttcaggaggaaggatgggtagt
gtctgcggcaagatgagaagggaaagggagcgatactgtgcatcaagacctggacaaaaa
caacaactggagatggagcaggaagagctacctgaggttcccctgcccatcagtactgca
tcgctgccaacgttcagcttcagtttccccgccagtagtgctgtgtcctcatcacccagc
attgtttcaaaagcagtgatgaacaaggtacaaccagcaagtaatgttggcagtcctaca
tttgtattttcatctccaattgtgaaatctaccgaggtggaagtgctacctccattatct
cagattaagtttacatttagtgttcctgtcgtaaagtcatcagagctttctggatccact
gatacaccagtgacatccatccttagtccaggtagcgccactgtaaacagcaccagcaat
aagaaggaagaggaagaagaatatgacgggttctgcaaacctgctaaattcttaaagcaa
ggaagtgtgttagacattctaaaaagccctggctttatgtctggcaaatcaccctcttgt
tcatctgcacagcctgttacgagcacagtggtctatacaaggcctgcaataagtaatttt
tctgcaggtaaaaacacctctaaacaagcatcctcgttctggcagtctgacacacatgac
ccgtgtctgcagaacaaaaccacagacggcaactgtgtaacatgtgaagctgctaaagtg
tccactgttgagagtacaaagcagactgtcagtgtgagtccgtgtgtctcctccaagaca
gcagtccctacagcagggacactgggctttgaagacaaatttaaaccggcacccaacact
tgggattgtgatacctgtctggtccagaacaaacctgaagctacaaaatgtatagcatgt
gacacaccaaagcctggaacaggagtgatgcctgctctgacaatgccgatggtcacggac
aactcggtgacagtgacatccaccaccagcagcacgggcacaacagtcactctggggttt
ggagacaaatttaaacagccaaaaggctcttggaactgttcagtgtgccttgtacaaaat
aaggcagaagacagcaaatgtgtagcttgtcagtctgagaaaccagggagttcagtgcct
gtgaccagtagcagtgtttctgcattttctgcttcttctggaggttttctggatttagac
aaattcaagaagcctgaaggaagttgggaatgtgaggtctgcttggtccaaaacaacgca
gaagccacaaaatgcatagcctgtcaaaatgcgaagccaggcaccaaagcagagctcaaa
ggttttggtactgctactgtgtctacaaatgctgcagcgccatcattcacatttggtgtc
ccgtcatcatcctctgaatcttctcaaacattaggtagcacaggaaattttaaatttgga
gaacagagtagctttaagttcggcattgcatccgaatctgcatcgtccagcactgtgact
ggaggatttaagtttcctgctgcttcagggaacttcaaatttggagtttcttcctcagac
tctaaatcagaagacagcaaaaaagaaagtaaaagtaacagttttacttttggacttcca
tctacaagcagtcaggctcctacaacatttcagtttggaacaacgagtctgggacagcag
gaaaagaaagaggaaccagttttgggaggttttggttttgctacaagttctacttcttcc
atagctactaatgagactaaaactggagtcggtggcttcacttttggaactatggcagaa
aaggatgcagcatcacctgctttgccatttaagaagtcagatgagaaaaaggatgaaact
gtttcaacgaagggaggcttctctttcagcagcgtggagtctgcccctgcctcgcagttt
gttttgggaaggacagaagagaagcaggactctgtcacttctgctggtccattagcattt
ggaaagaaagctgacaatgaagagttaaaggcacagcctatcttttcatctgggacagct
gagcataccaaagaggagagcacagcaaaacctgtattcaattttagttttggtaaacca
tcggaaaaggaaagtgagcaggcaaaggcaccttttgcatttggggcaccaaccagtact
tgcgatcaaggagcatccttcagcttcttgagctccagttcctccagcacagtggtaccc
accacttcagccaacagcagtagtgtgtttggcagcaccctctcttcctcaaaccctcag
ccagttcccactccctttgtgtttggacaacccagcaacactgtgaccagctctgttttt
ggcaatccagcggaatctgcaacatctcagtcattcggcttctctcaagaaaacaaacca
gcaaccacatcttccagcgctggctcaactctgactccgtttctctttgcttcaggagag
agcagtaccaatgcagcaaattcaggatttacttttggagccacaactacatcaggttca
acagggtcatcgtcttcgtttctgtttggctctgggcctccagcgcctgctgctggccca
gcctttggcgccagtcagccaccagcatttggcccaagcccaggctccggccagcaaagc
gctccaagctttggatcgctgtcgacaacgttgttttctcctggctctcaacctgctcct
tctgccttcggctcggtgacaagcagcactcagccctctgtgttcggacaacaggcagcc
aatcagccaacttttggctctggtacccccagtgctggttctgtattccggtttggaagt
agtactactaatttcagctttccaaataacccaggagtattcacttttggtgcaaatcct
cctgcaccagcagctcctgcaccgccttctggcacttcaggattttcgttcaaccagcct
ccagcatttacagtggggactaatgggaaaaatgttttctctgcctctggatcttcagtt
gctggtcggaagataaagactgcagttagacgtagaaagtaa
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integrated database retrieval system
