Parus major (Great Tit): 107199808
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Entry
107199808 CDS
T04864
Symbol
CDK13
Name
(RefSeq) cyclin-dependent kinase 13 isoform X1
KO
K08819
cyclin-dependent kinase 12/13 [EC:
2.7.11.22
2.7.11.23
]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pmaj01001
]
107199808 (CDK13)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
107199808 (CDK13)
2.7.11.23 [RNA-polymerase]-subunit kinase
107199808 (CDK13)
Protein kinases [BR:
pmaj01001
]
Serine/threonine kinases: CMGC group
CDK family
107199808 (CDK13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Kinase-like
Pkinase_fungal
Kdo
Motif
Other DBs
NCBI-GeneID:
107199808
NCBI-ProteinID:
XP_015472850
Ensembl:
ENSPMJG00000018048
LinkDB
All DBs
Position
2:complement(53412835..53459963)
Genome browser
AA seq
1536 aa
AA seq
DB search
MPSTSDAAAGGSGGSRGWGSGGGSSAAVEAAADKKRLHHRRRKRFAAQPQPPPPAPHPLL
FPLLQPPLLQPPLLQPPLPPQSLLFLAATGASSCCGDGGERKRPRGKRRSGSRHKRRRGR
GGGGGGTQEAEKRRGSGGLSTLVEEYDDVSSQSEGLLGGGAAGGGSGGGSPGSSSGGGTQ
RQRGEAERSGRSRREHRGSSGRSKERHREHRRRGEEKAQQEGTAAPGRGASEPSSSSKSR
SRHNHTGSQDREGLKSSSSSGGGSDGRRKGSLASPSSGRKDRESKSHRSRTKAAKEPPSA
YKDPPKAYRDDKPEPKAYRRQRSSPSPGRDDSPPLHRSSQSQRSRKSLSPVGARSPLSPY
SRRRSPSYSRHSSYERGGDVSPSPYSSWRRSRSPYSPVIRRSAKSRSRSPYSSRHSRSRS
RHRLSRSRSRHSSISPSTLTLKSSLAAELNKNKKARAAEAAKASAKASNTSTPTKGNTDT
AAVSAPQVNNVKDLKKIKTEHTPSPTSSANLKNDKAKAKVSLPETKAENNLIADKITKQK
PAAVKESKLTVVKQPPVPVKEKSKPSTPSVVAKEKDRIVALPTSTLPPLPLPPTLPEDKE
TDSKMMGFFNSLRENVSVKTVKETEKKLRHLLADLPLPPELPGGAEVPKSPEEKKPAVQL
HSKRRPKICGPRHGETKEKEIDWGKRCVDKFDIIGIIGEGTYGQVYKARDKDTGEMVALK
KVRLDNEKEGFPITAIREIKILRQLNHQSIINMKEIVTDKEDALDFKKDKGAFYLVFEYM
DHDLMGLLESGLVHFNENHIKSFMRQLMEGLAYCHKKNFLHRDIKCSNILLNNRGQIKLA
DFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIF
QANQELAQLELISRICGSPCPAVWPDVIKLAYFNTMKPKKQYRRKLREEFAFIPPAALDL
FDYMLALDPSKRCTAEQALQCEFLRDVEPSKMPPPDLPLWQDCHELWSKKRRRQKQMGMT
DDSTAAKVPRKDLSLGMDESRTNTPQGMQTSSQLKTQGSSSVALAKTSTGQQLNQNEVAI
LLNLLQSKTSVSLAQFAQVLNIKVNPETQQQLNKINLPAGILSAGEKQSEQQQQPPPPPP
PPPEQEPLKQPMVTQPPVPPAQLGQPKAETDAAQAAVQSAFAVLLSQLIKAQQTKQKDFA
LEDKENGSGNEMSLQLRQPPELATPVSVSRDDVESPAPGYPHLIKSLYVSAGQEDLVRQS
EMRLLNRTPEQERPRILPPDQRPPEPPEPPPLTDEDLDYRTENQHLPISNSSGTDPHAGV
KAALLQLLAQHQAQATTEEPVQTSVDYQARDSYVTGPDYKDNFGSSSFSSACYSTSDGIG
SGSSGVLERRSFLGNSDIQSLDNYSTASSHSGAAPPPSAFPESFPSSVTGYGDIYLNAGP
MLFSGDKDHRFEYSHGPIPVLGSGSDASTGPESAHSLPTKIHNYSYGSNLQENPTGISHM
HGQTWTSPAQGPGYSQGYRGHISTSAVRGRGRGLPY
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcacctcggacgcggcggccggcgggagcgggggcagccggggctggggcagc
ggcggtggcagcagcgcggcggtggaggcggcggccgacaagaagcggctgcaccaccgg
agacggaagcgcttcgcggcccagccgcagccgccgccgccggccccgcacccgctgctg
ttcccgctcctgcagccgccgctcctgcagcccccgctgctgcagccgcctctgccgcca
cagtccctgctcttcctggcggccaccggcgcctcctcctgttgcggggacggcggggag
cggaagcgaccgcgaggcaagcggcgctcgggctcccggcacaagcggcggcggggccgc
ggcggcggcggcgggggcacccaggaggcggaaaagcggcgcggtagcggcgggttgagc
acgctggtggaagagtacgacgacgtgagttcccagtccgagggactattgggcggcggc
gcggccggcgggggcagcggcgggggcagcccgggctcctcctcgggcggtgggacccag
cggcagcggggcgaggcggagcgaagcggccggtcccgtcgggagcaccgcggcagcagc
gggcgctccaaggagcggcaccgagagcatcgccggcggggagaggaaaaggcgcagcag
gaggggacagcggcaccgggccgcggggcatccgagccctcctcgtcctccaaatcccgc
agccgccacaaccacactgggagccaagaccgggagggactcaagagcagcagcagcagc
ggcggtggcagcgacggccgcaggaagggctccctcgcctcgcccagcagcggcaggaaa
gaccgagagagcaaatcgcaccggagccggactaaagcggctaaggagccgccgtcggca
tacaaggaccctccgaaagcttaccgggacgacaagcccgagcccaaggcgtaccggcgg
cagcgctcgtcacctagccccggccgggatgacagccctcctctgcaccgctcctcgcag
agccagcgcagccgcaagtcgctcagcccggtgggcgcccgctcgccactcagcccctac
agccgacgccgatcccccagctacagccggcacagttcgtacgagcgcggcggggatgtg
tcgcccagcccctacagcagctggcgccggtcgaggagcccctacagccccgttatccgg
agatcagcaaaatctcgaagcagaagtccgtattcatcaaggcactccaggtctcgtagc
agacacagattatctagatccagaagtcgtcattcaagtatttctcctagtacattaact
cttaagagtagcctagctgctgagctgaacaaaaacaaaaaagcaagagctgctgaggca
gccaaagccagtgcaaaagcttccaatacttcaacacctactaagggaaacactgacact
gctgctgtaagtgcacctcaagtgaacaatgttaaggacctgaagaaaatcaaaactgag
catacaccttcacctaccagcagtgcaaatctgaaaaacgacaaggcaaaagcgaaggtc
tcgcttcctgaaacaaaagcagaaaataatttaattgcagacaaaattactaaacagaag
cctgcagcagtaaaagagagtaaattgactgttgtgaaacagccaccagtccctgtaaaa
gagaaaagcaaaccaagtacaccaagtgtagtagccaaggagaaggatcgaattgttgca
ttaccaacctccacactgccacccttgcctttgcctcccacgctgcctgaagataaagaa
actgatagcaaaatgatgggttttttcaatagtttgagagagaatgtttcagtgaagacg
gttaaagaaacagagaagaaacttcgccatctgcttgcagacttgccacttccacctgag
ttgcctggaggagctgaggtacccaaaagtcctgaagaaaagaaaccagcagttcagtta
catagcaagagaagaccaaaaatatgtggaccacgacatggtgaaactaaagaaaaagaa
atagactggggaaagcgctgtgtggataaatttgatatcattggtattattggtgaaggc
acttatgggcaagtttacaaagccagagataaagatacaggggaaatggtagcactgaag
aaagtacgcctggataatgaaaaggaagggtttccaattacagctattcgagagattaag
attcttagacagcttaatcatcaaagcattatcaacatgaaggaaatagtgacggataag
gaagatgctttggacttcaagaaggacaaaggtgcattttacctggtatttgaatatatg
gaccatgacttgatgggactgctggaatctggtttggttcattttaatgaaaatcatatt
aagtcctttatgagacagctgatggagggcttggcctattgccacaagaagaactttttg
cacagagatatcaaatgttcaaatattctactaaataatagagggcagataaagcttgca
gattttgggcttgctcggctgtacaactcagaagaaagccgaccatataccaacaaagtt
attacattatggtatcggcctcctgaacttcttcttggggaagaaagatacacaccagct
attgatgtctggagctgtggctgtatcctgggtgaactttttacaaaaaagccaatattt
caagccaatcaagaacttgctcaactggaactcataagccgaatttgtggaagtccttgt
ccagcagtatggcctgatgttataaaattagcttatttcaacactatgaaaccaaagaag
cagtatcgtcgaaaactgagagaagagtttgctttcatcccaccagctgcattagattta
tttgattatatgcttgccctggatcccagcaagcgttgcacagctgaacaagctcttcag
tgtgagtttctgcgagatgtggaaccatctaaaatgcctcctccagaccttcctttgtgg
caggattgccatgagctgtggagtaagaaacgcagaagacagaagcagatgggcatgact
gatgactctacagcagctaaagtccctaggaaggatctgtccctaggcatggatgagagc
agaaccaacaccccacaaggcatgcaaacttcttcccaactcaaaactcagggcagctct
agtgtagcacttgcaaaaacaagcactggacagcagttaaaccagaatgaagtggcaatc
ctgctaaacctgctacagtctaaaacaagtgttagtttggcacagtttgcccaagtattg
aatattaaggtaaatccagagactcagcagcaactaaataaaataaatcttcctgctgga
attttgtcagcaggtgaaaaacagtcagaacagcagcagcagccgccacctcctccgcca
ccacctccagagcaggagcctctaaaacagccgatggtcacgcagccccctgtgccacct
gctcagctgggtcagcctaaggctgagactgatgctgcccaggcagctgtgcagagtgca
tttgctgttctgttgtctcagttaataaaggctcagcaaacaaaacagaaagattttgcg
ttggaggacaaggaaaatggatcaggaaatgaaatgtcattacaactcaggcagcctcca
gagctcgccactcctgtgtctgtcagccgagacgacgtggaatctccagcacctggctac
ccacatctgatcaagtcattatacgtgtctgcaggtcaagaagatttggttaggcagtct
gagatgaggcttctgaaccgaacacctgagcaggagcgccctcggatcttgcctccggac
cagcgtccccccgagccaccggagcctccgccgctcactgatgaagaccttgattatcgg
acagagaatcagcatttgcctataagtaactcttcaggaacagatcctcatgcaggagtg
aaagcagctcttctgcagctgctggctcagcatcaagctcaggcgacaacggaggagcca
gtacaaacgagtgtggattatcaggctagagactcctatgtaacaggcccagactacaag
gataactttggatcatcgtccttctcatctgcctgttacagcactagcgatggaatagga
agcggatcatcaggagtattagaaaggaggagtttccttggaaactcagatattcagtct
ttggataactacagtactgcttcatctcactctggtgctgcccctcctccatcagccttt
ccagaatcctttcctagctcagtaactggttatggagacatttacctcaacgctggcccc
atgctgttcagtggagataaagaccataggtttgaatacagccatggcccaatcccggtt
ttggggagcggcagtgatgcttccacagggccagagagtgcgcactctttgcccacaaag
attcacaactatagctatggaagtaatttacaggaaaatcccactggcatcagccacatg
catggacagacttggacttctcctgcccaaggacctggctattcccagggatacagggga
cacattagcacatctgcagtaagagggcgaggcagaggattaccatattga
DBGET
integrated database retrieval system
