Parus major (Great Tit): 107199846
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Entry
107199846 CDS
T04864
Symbol
SMARCD3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107199846 (SMARCD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmaj03021
]
107199846 (SMARCD3)
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107199846 (SMARCD3)
Transcription machinery [BR:
pmaj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107199846 (SMARCD3)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107199846 (SMARCD3)
PBAF complex
107199846 (SMARCD3)
GBAF(ncBAF) complex
107199846 (SMARCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
107199846
NCBI-ProteinID:
XP_015472989
Ensembl:
ENSPMJG00000003920
LinkDB
All DBs
Position
2:1255911..1333969
Genome browser
AA seq
485 aa
AA seq
DB search
MATDEVTGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYVGSPSVRPGM
PQTVMETTRKRTAPQQVQQQQVQQQVQQQQQATQNRARSAKRRKMADKILPQRIRELVPE
SQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKSDADDSDGS
IASWELRVEGKLLDDLSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGF
QVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSAIIQALWQYIKTNKLQD
SHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHIISVDPNDQKKTACY
DIDVEVEDPLKGQMSSFLLSTANQQEITALDNKIHETIESINQLKIQRDFMLSFSKDPKG
YIQDLLRSQSRDLKVMTDVVGNPEEERRAEFYHEPWSQEAVSRYFYCKIQQRRQELEQSL
GVRNT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctacagatgaagttacaggaggggctcgcaaagctacgaaaagcaaactttttgag
tttctggtccatggggtgcgccctgggatgccatcgggagctcgaatgccccatcagggg
gctcccatgggtcctccaggccccccgtacgtcggaagcccctctgtgcgacctggaatg
ccccagactgtgatggaaacaacaagaaaacgcactgcgccgcagcaggtccagcagcag
caggtgcagcagcaggtgcaacagcagcagcaagccactcagaaccgagctaggagtgcc
aagaggaggaagatggctgacaaaattctccctcagaggatccgggagctggttcctgag
tcccaggcctacatggatctcttggcctttgagcgcaaactagaccagaccattatgcgg
aagcgcgtggatattcaggaagcactgaagaggccaatgaagcaaaagcggaaactgaga
ctttacatttccaacacatttaatcctgcaaaatcagacgctgatgactcagatggcagc
attgcttcgtgggagctgcgcgtggaggggaagctcctggatgatctcagcaaacagaaa
cggaagttttcatctttttttaagagtttggttattgaactggacaaagatctttatgga
cctgacaatcatcttgtggagtggcacagaactcccacgacccaggaaacggatggcttc
caggtgaagagacctggggatgtcagtgtgcgatgcacattactgctcatgctggactac
cagcctccccagtttaagctggacccgcggttggcccgtctgctggggatccacacacag
acacgctcagccatcatccaggctctctggcagtacatcaaaacaaacaagctgcaagac
tcccacgataaggagtacattaactgtgacaagtacttccagcagatctttgactgtcca
cggctaaagttttctgaaattcctcagagactcactaacctactgttgccaccagaccca
atagtgataaaccacatcatcagtgttgaccccaacgatcagaagaagacggcttgttat
gacatagatgtagaagttgaagacccattaaagggccagatgagtagttttcttctctca
acagctaaccaacaggagataacagcattggataacaagattcatgagacaattgagtcc
ataaatcagctaaaaatacaacgtgattttatgctgagtttctccaaggatcccaaagga
tacatccaagaccttctccggtcccaaagcagggatcttaaggtgatgactgatgtggtt
ggaaacccagaggaagaacgcagagccgaattttatcacgagccatggtctcaagaagct
gtgagcagatacttctactgcaagatccagcagcgccgacaggaattggaacaatctttg
ggagtgcgtaacacataa
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integrated database retrieval system
