KEGG   Parus major (Great Tit): 107199850
Entry
107199850         CDS       T04864                                 
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
pmaj  Parus major (Great Tit)
Pathway
pmaj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107199850 (EXOSC7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmaj03019]
    107199850 (EXOSC7)
Messenger RNA biogenesis [BR:pmaj03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     107199850 (EXOSC7)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     107199850 (EXOSC7)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 107199850
NCBI-ProteinID: XP_015473003
Ensembl: ENSPMJG00000010678
LinkDB
Position
2:44923620..44944611
AA seq 290 aa
MASVVLSEAEKLYIVHGVQEDLRVDGRGCEDYRCAEVETDVVSNTSGSARVKLGETDILV
GIKAEMGTPKLEKPDEGYLEFFVDCSSNSPELEGRGGEELGTDIANTLYRVFSCENSVDL
KSLCINPKEHCWVLYVDVLLLECGGNIFDAISIAVKAALFNTRIPKVRVLEDEEGTKEIE
LSDDPYDCIRVIVDEVPCIVTLSKIGYRHVVDATLQEEACSLASLLISVTSKGAITSMKK
VGKGSLDPESIFEMMETGQRVGKSLHIALQKILDEEENLGTSRPKVGFLG
NT seq 873 nt   +upstreamnt  +downstreamnt
atggcgtccgtggtgctgagcgaggcggagaagctgtacatcgtgcacggcgtgcaggaa
gaccttcgtgtagatggtcgaggctgtgaagactacagatgtgcagaagtagaaacagat
gttgtatcaaacacaagtggatccgcaagagtaaagctgggagaaactgatatcttggta
ggcataaaagctgaaatggggacaccgaagttggagaaaccagatgaaggttacctggaa
ttttttgttgactgttcttcaaattctcctgagttggaaggccggggaggagaagaactt
ggcacagatatagcaaatacactgtacagagtattcagctgtgagaacagtgtagacttg
aaatccctttgtattaatcccaaggagcactgctgggttctctatgtggacgtattgtta
ttagaatgtggtgggaacatctttgatgcaatctctatcgcagtgaaggcagctctcttt
aacacaagaatacccaaagtgcgtgttctggaggatgaagaaggcaccaaagagattgag
ctgtctgatgacccttatgattgtattcgagtcatcgtagatgaggtgccctgtattgtc
acactaagcaaaattggatataggcacgtggtggatgctaccctacaggaagaagcctgt
tctttggcaagcttgcttatttcagtgaccagtaaaggtgccatcacttctatgaagaaa
gtggggaaaggtagcctggatcctgagagtatttttgaaatgatggagacaggacaaaga
gtaggcaagtcacttcacatagcccttcagaagattttggatgaagaagagaatttgggg
acttcacgaccaaaagttggatttctaggatga

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