Parus major (Great Tit): 107199850
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Entry
107199850 CDS
T04864
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107199850 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107199850 (EXOSC7)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107199850 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
107199850 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
107199850
NCBI-ProteinID:
XP_015473003
Ensembl:
ENSPMJG00000010678
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All DBs
Position
2:44923620..44944611
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AA seq
290 aa
AA seq
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MASVVLSEAEKLYIVHGVQEDLRVDGRGCEDYRCAEVETDVVSNTSGSARVKLGETDILV
GIKAEMGTPKLEKPDEGYLEFFVDCSSNSPELEGRGGEELGTDIANTLYRVFSCENSVDL
KSLCINPKEHCWVLYVDVLLLECGGNIFDAISIAVKAALFNTRIPKVRVLEDEEGTKEIE
LSDDPYDCIRVIVDEVPCIVTLSKIGYRHVVDATLQEEACSLASLLISVTSKGAITSMKK
VGKGSLDPESIFEMMETGQRVGKSLHIALQKILDEEENLGTSRPKVGFLG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtggtgctgagcgaggcggagaagctgtacatcgtgcacggcgtgcaggaa
gaccttcgtgtagatggtcgaggctgtgaagactacagatgtgcagaagtagaaacagat
gttgtatcaaacacaagtggatccgcaagagtaaagctgggagaaactgatatcttggta
ggcataaaagctgaaatggggacaccgaagttggagaaaccagatgaaggttacctggaa
ttttttgttgactgttcttcaaattctcctgagttggaaggccggggaggagaagaactt
ggcacagatatagcaaatacactgtacagagtattcagctgtgagaacagtgtagacttg
aaatccctttgtattaatcccaaggagcactgctgggttctctatgtggacgtattgtta
ttagaatgtggtgggaacatctttgatgcaatctctatcgcagtgaaggcagctctcttt
aacacaagaatacccaaagtgcgtgttctggaggatgaagaaggcaccaaagagattgag
ctgtctgatgacccttatgattgtattcgagtcatcgtagatgaggtgccctgtattgtc
acactaagcaaaattggatataggcacgtggtggatgctaccctacaggaagaagcctgt
tctttggcaagcttgcttatttcagtgaccagtaaaggtgccatcacttctatgaagaaa
gtggggaaaggtagcctggatcctgagagtatttttgaaatgatggagacaggacaaaga
gtaggcaagtcacttcacatagcccttcagaagattttggatgaagaagagaatttgggg
acttcacgaccaaaagttggatttctaggatga
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