Parus major (Great Tit): 107200077
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Entry
107200077 CDS
T04864
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107200077 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107200077 (DROSHA)
03009 Ribosome biogenesis [BR:
pmaj03009
]
107200077 (DROSHA)
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107200077 (DROSHA)
Enzymes [BR:
pmaj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
107200077 (DROSHA)
Messenger RNA biogenesis [BR:
pmaj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
107200077 (DROSHA)
Ribosome biogenesis [BR:
pmaj03009
]
Eukaryotic type
90S particles
RNase
107200077 (DROSHA)
Prokaryotic type
rRNA processing factors
107200077 (DROSHA)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
107200077 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Cro
5_3_exonuc
YcaO
Motif
Other DBs
NCBI-GeneID:
107200077
NCBI-ProteinID:
XP_015473543
Ensembl:
ENSPMJG00000002072
LinkDB
All DBs
Position
2:69722407..69796264
Genome browser
AA seq
1336 aa
AA seq
DB search
MSFHSGRGCPRGQGGPGARTSTQTYRPQNLRQLHPQQPSVQYQYEQQTAPPTSYSSPPAT
GYMPPRPDFVPYPPPVPPSTQNPISQCPMRPPFPNHQMRQSFPVPPCFPPTPPPVPNPSS
TPVPGTPAGQSTFPYMMPPPTVPHPPPPPVMPQQVSYQPVYSAGYSQQSFPPPGFNSYQH
SSGSFPSSTASSSAGGSHFRHTGQYQGEKSQSDRRSPDRSKHYDEHRHREHGHIHGDRHR
SANHGDRRDRGRSPDRRRQESSRHRTDYDRGRISPHHRSYERNRERERERHRHRDSRRSP
SPDRSYKKDYKRAGSRSPSRERKRTRWEEDRERWSENQSSSKEKNYTAVKDKESEENASE
KNEEEDEELLKPVWVRCTHSESYYSNDPMDQVGDSTVVGTSKLRDLYEKFDEELGKRQAK
AKAARPPWEPPKTKLDEDLESSSESECDSEDDSSCSSSSDSDVIDVIAEIKRKKAHPDRL
HEELWYNDPGQMNDGPLCKCSAKARRTGIRHGIYPGEEPIKPCRPMTNNAGRLYHYRITV
SPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPE
NFCVRGLELFSSYLFKDILELYDWNLKGPSLENDSISCPRYHFMPRFVRFLPDGGKEVLS
MHQILLYLLRCSKALVPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRIDQLD
REQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKL
SQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHVRYHQCLMH
LDKLIGYTFRDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHIHMR
KKGINTLINIMSRLGQDDPAPSRINHNERLEFLGDAVVEFLTSVHLYYLFPTLEEGGLAT
YRTAIVQNQHLAMLAKKLELERFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLE
EAKQLFGRLLFNEKDLRDVWLNYPLHPLQLQESNTDRQLIETSPVLQKLTEFEEAIGVIF
THVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLR
SSLVNNRTQAKVAEELGMQEFAITNDKTKRPVTLRTKTLADLLESFIAALYIDKDLEYVH
TFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTY
TVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKELRWE
REHQERESEETEEARK
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccattctgggcgaggatgtccccgtggccaggggggaccaggagcaagaact
tcaacacagacttaccgccctcagaacctccggcagcttcacccacagcagccctccgta
cagtaccagtatgagcagcaaaccgcccctccaacatcctactccagccctccagccacg
ggttacatgcctcccaggccagactttgtgccctatcctcccccagtgcccccttccaca
caaaatcccatcagccagtgtcccatgaggccaccatttccgaaccaccagatgaggcag
agcttcccagtgcctccatgtttccctcccactcctccaccggtgccaaatcctagcagc
actcctgtgccaggaacacctgccggacaaagcacctttccttacatgatgcctcccccc
acagtaccacaccctccccccccgccagtcatgccacagcaagtcagctaccagcccgtg
tactcagcagggtactcgcagcagtccttcccgccgcccggcttcaacagctaccagcac
agctccggctccttcccgagcagcactgccagcagcagcgccggcggcagccacttccgg
cacacggggcagtaccagggagagaagtcccaaagtgaccggcgctccccggacaggagc
aagcactacgatgagcaccggcaccgcgagcacgggcacattcacggcgacaggcatcgc
tccgctaaccacggggatcgtcgggatcgcggccgcagtccggataggaggaggcaggaa
agcagtcggcaccggacagattatgacagaggaaggatatcacctcatcacagaagttat
gagcgaaacagggagcgggagagggagaggcatcggcaccgtgacagcagaagatcaccg
tcaccagacagatcctacaaaaaggattacaagagagcaggaagccggtctccaagcaga
gagagaaagagaacccggtgggaggaggacagagaaaggtggtctgagaaccagagttcc
agtaaagagaagaattatactgctgtcaaagacaaagaatcagaagagaatgcatctgaa
aaaaatgaagaggaagatgaggaattacttaagccagtctgggttcgctgtacccattct
gaaagctattattccaatgaccctatggatcaagtgggggactctactgtggtaggaaca
agcaagctccgggatctgtatgaaaagtttgatgaggagttaggaaagcgacaggcaaag
gccaaagcagccaggccaccatgggagccaccaaaaaccaagctggatgaagatttagag
agctccagtgagtcagagtgtgactccgaagatgacagcagctgctccagcagttcagat
tcggatgttattgacgtcattgcagaaattaagcgaaaaaaagcacaccctgatcgtctc
catgaagaattgtggtacaatgatccaggacagatgaatgatggacctttgtgcaagtgc
agtgcgaaagcccggcgaacaggaataagacatggcatttatcctggtgaagagcccatt
aaaccatgtcgccccatgaccaacaatgctggaagactataccactaccgaattactgtg
tcacctcccacaaatttcttaacagacagacctactgttattgaatatgatgaccatgaa
tatatctttgaagggttctccatgtttgcacatgccccactaacaaacattcctctatgc
aaagtaatcaggtttaacattgactatacaattcatttcattgaggagatgatgcctgag
aatttttgtgtgagaggccttgaactgttctcttcatatctattcaaagatattttggag
ctgtatgactggaatcttaaaggtccttcgcttgaaaatgattctatttcctgtcccaga
taccacttcatgccgcggtttgtgagatttctcccagatggagggaaagaagtactctca
atgcatcagattcttctctacttgttacgatgcagtaaagctctggtgcctgaagaggag
attgccaacatgcttcagtgggaagaactggaatggcagaaatatgcagaagaatgcaaa
gggatgatcgttaccagccctggcatgaaacccagctcagttcgtattgatcaactagac
cgcgaacaattcaatcctgatgtaattactttccctattattgtacactttgggatacga
cctgctcaactcagttatgctggagatcctcaataccaaaagctgtggaagagttatgtg
aagctgcgtcacctactggctaatagtcccaaggtcaaacaggctgataaacagaagtta
tcacaaagagaggaagcactgcagaaaattcgtcagaagaacacaatgagacgtgaagtg
actgtggagttgagcagccagggattctggaaaacagggatacgctctgacgtctgccag
catgccatgatgcttcctgtcctcacccaccatgtccgctaccatcagtgtctgatgcac
ttggacaaattgataggctacactttcagagataggtgcttactgcagcttgccatgact
cacccaagtcaccatttaaattttgggatgaatccagatcatgccaggaattccttatcc
aactgtgggattcgacagcccaagtatggagatagaaaggttcaccatatacacatgaga
aaaaaagggataaacaccctgataaatattatgtcccgtttgggacaggatgatccagct
ccttccaggattaaccacaatgagcgtttagaatttctgggagatgctgtggtggagttc
ttaacaagtgtccacttatactacctgtttcccactctggaggaaggaggattagctacg
taccgcactgccattgtgcagaaccaacacctggccatgctggctaagaagctggaacta
gaacgattcatgctctatgctcatggtccagacctttgtagggagtcagatctccgccat
gccatggccaactgctttgaagccctgataggagctgtttatctagagggaagcctagaa
gaagcaaaacaattatttggacgtttgctcttcaatgaaaaggacctgcgggatgtatgg
cttaattatccactacacccactccaactgcaggaatctaatactgacaggcaactcatt
gagacctctccagttcttcaaaagcttacagagtttgaggaggcaattggagtcatcttc
actcatgttcggcttctagcacgtgcgttcactctgaggacagtaggctttaaccatctg
accctaggccacaaccagaggatggaattcctgggtgactccataatgcagttggtagcc
accgagtatttattcatacatttccccgatcatcatgaagggcacttaacgctgttgaga
agttctttggtgaacaacagaacacaggccaaggttgcagaagagctgggcatgcaagag
tttgccatcactaacgacaagacaaaaagacccgtaactcttcgaactaagactttggct
gatctcttggaatcctttattgctgccctgtacattgataaagatttggaatacgttcac
actttcatgaatgtttgcttttttccacggctaaaggagttcattttaaatcaagattgg
aatgatcctaaatctcagcttcagcagtgctgcttgactctcaggacagaaggaaaagag
ccggacattcctctttacaagaccttgcagacagtgggaccttctcatgccaggacgtac
acagtagcggtttacttcaaaggggaaagaataggatgtggtaaaggtccaagtattcag
caagcagaaatgggagctgcaatggacgcacttgaaaaatataactttccccagatggcc
catcagaaacggttcattgaacggaagtacagacaagagttgaaagaattgaggtgggaa
agagagcatcaagagagagagtcagaggagactgaagaagcaaggaaataa
DBGET
integrated database retrieval system
