Parus major (Great Tit): 107200313
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Entry
107200313 CDS
T04864
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107200313 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmaj01009
]
107200313 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmaj04131
]
107200313 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
pmaj03029
]
107200313 (RB1CC1)
Protein phosphatases and associated proteins [BR:
pmaj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107200313 (RB1CC1)
Membrane trafficking [BR:
pmaj04131
]
Autophagy
Autophagosome formation proteins
ULK complex
107200313 (RB1CC1)
Mitochondrial biogenesis [BR:
pmaj03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
107200313 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
107200313
NCBI-ProteinID:
XP_015474118
Ensembl:
ENSPMJG00000015694
LinkDB
All DBs
Position
2:complement(111691232..111756633)
Genome browser
AA seq
1630 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENVYSSYLQ
SIDDIKLKLTHLGSAVSIMAKIPLLECLTRHSYRECLGRLESSPEYGGTESEETEDGKSA
ELVLYPDVSKVNSKSMLASFCKSVEHSALEGTDPENVKDDKESGQSVTVQDNEMSVELKD
DQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQNM
KAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHANQ
LMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTEL
LERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESFG
KLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLRV
PILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRMEST
TGTAIATSSKTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALKQ
GSLDLDSLAESPESDFMSAVNEFVIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSRR
MQDTSSCVKDVSVENASLSVCVEKCRVIAQDSKVHLRGIKEDLCHFRTLVQREQCDFSNS
LKCTSLEIVNTIEKVKLSLEKTLNDKHQNELQSLKSEYETKINKLLEDGEENKKKIKKLK
GDLLGLEEVLQNKNDEFAIVKNEKEAVVCLQNEKDQKLLELECQMKTQNSEIKELRQSRE
IVLEDLKKLHVENNEKLQLLRAELESLEQSHLKELESNLQARHLQEFEKVLAEHKDCLDK
LKKENQHRLEQMQESHEVVMQEKQQQVEELQLKVSDLSDLRCKLEVELALKEAETDEMKL
LLEESRNQQQETLKSQIDKETESLRKEIDKLNNKIQISSDEYQVGLSELRTLMTIEKDRC
ISELVNIHEAESNLLRTELNKVTLLHQKTAEAEKRLSEQITELQSKLELEMSALEKEKTE
KLSLSEQQEKYEAIIHKLKEEKELLVSNQEQDRQLLIQKLNCEKEDAVQTACKEFELQRE
AAEKGLLEKIQQLEMQVNRSPPSESSAESNLVAELQEKLQEEKMKFLEQLEEQEKRKNEE
MQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKVLTQQQEKDKDLIETLSEDRA
RLLEEKKKLEEEVNKLRSSNFSPSTYLAAASEVCGACAADVPTDTDRLVADFGAEGRMDS
TMETSMMAVHENLHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIA
IRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVLG
KVMEKEYCQAKKGTKQIQSSFGYKILQSESSTMEQESITQQNFGSFCLHSFLTCPSVLVH
RSKYQAIFLY
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttttggtcaacactggaactacccttacatttgatactgaactt
gctgtacaaaatgtggctgatctgaaacatgcaattcaaacaaagtataagattgccatt
cagcaccaagtactggttgtcaatggaggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagacaccaacccaatttttttgttcaacaaagaaatgatcttg
tgtgagcgtccaccagctatccccaaaaccacgttttcagcagagaatgagatggaattg
aaagtagaagaatctcttatgatgcctgccgtgtttcatacagtagcatcacgaacacag
cttgctgtggaaatgtatgaggttgccaagaagctttgctccttttgcgaaggtcttgta
catgatgaacatcttcagcatcaaggctgggctgccataatggccaacttggaagattgt
acatactcttaccaaaaactgcttttcaagtttgaaaatgtgtattcaagctatttgcag
tccatagatgatatcaaattgaaacttacacacttgggttctgctgtttctatcatggcc
aagataccactgctggagtgcctaacaagacatagttacagagagtgtttaggaagactg
gagtcttcacctgaatatggaggaacagaaagtgaagaaactgaggatgggaaatctgct
gaattggtgctttatcctgatgtatctaaagtgaacagtaaatcaatgttagcatcattt
tgcaagtcagttgaacattcagctttggaaggcacagatcctgaaaatgtaaaagatgac
aaggaatctggtcaaagtgttactgtccaggacaatgaaatgtcagtagaattgaaagat
gatcagccttccttcaatgtgtctttgttagactggataaatgttcaagatagacctaat
gatgttgaatccctggtcagaaaatgctttgattccatgagcaggcttgatccaaggatc
atccaaccctttctggcagaatgtcgccaaactatcgccaaactagataatcagaatatg
aaggctattaaaggtcttgaggatagactctatgcattggaccagatgatagcaagctgc
agcagactggtgaatgaacaaaaagaacttgctcagggatttttggctaatcagaagaga
gctgagaatttgaaagatccttctgtgctgcctgatttgtgtttgagtcatgcaaatcag
ctgatgattatgttaactaatcacagaaaactgttagatattaaacagaaatgtaccact
gccaaacaggagcttgcaaataatctgcaagtcagactgaagtggtgttgttttgtgatg
cttcatgctgaccaagatggagagaaattacaagcactgcttcgtcttgtaacagagctc
ctagaaagggtcaaagttgtagaggctctcagcactgttcctcagatgtactgtttagct
gttgttgaggttgtgaggagaaaaatgtttataaaacactacagggagtgggcaggtgct
ttaataaaagatgggaaacatctgtatgaagctgaaaaggcaaaaagggaatctttcggt
aaactctttaggaagtcttttctaaggaatcgtttgtttagaggacttgactcctggcct
ccatccttttgtacacgaaaacctcgcagatttgacagtgagcttccagatatctcgttg
agtgacttgcagtttttgcagtctttctgtccttcagaagtacagccattactcagggtt
cccatactttgtgactttgaacctcttcaccagcatgtacgtgctctacataacctggtc
aaggcagcacagagtttggatgaaatgtcacaaaccattacagacctgctgaatgaacaa
aaggcctccaatagtcaagcatcgccacaatctgctaccacaccaaggatggaaagtact
acaggaactgcaattgctacctcttcaaaaactcctccatcactcagtcttcagggtccc
ctgtgtcctcctgtgtgtcccccagctccattagaagaattgtctccagacagcattgat
gctcacacattcgattttgaaactattgcccatccgaacttggagcaagctcttaagcaa
ggatcattagacttggattcactagctgagagtccagaatctgactttatgtcagcagta
aatgaatttgtaatagaagaaaatccagtgtctcctaatgtaataagtgacccacaaagc
ccggagatgatggtggagtctctttattcttcagttatcaatgcaatagacagtagacgt
atgcaagatacaagttcttgtgtaaaggatgtttcagtagaaaatgcttctctcagtgtt
tgcgtggagaagtgtagggttattgctcaagactcaaaggtacatttaagaggtataaag
gaagatctttgccatttcagaacacttgtacaaagagaacagtgtgacttttctaattcc
ttaaaatgtacttccttagaaatagtaaatacaattgaaaaggtaaaactttcacttgaa
aaaacactgaatgataaacaccaaaatgaattacagtctttgaaaagtgagtatgaaact
aaaattaataaattattggaggatggggaagaaaataaaaagaaaatcaaaaagttaaaa
ggtgacctgttaggccttgaggaagttcttcagaataagaatgatgaatttgcaatagta
aagaatgagaaagaagccgtagtttgccttcagaatgaaaaagaccagaaattacttgaa
ttggaatgccaaatgaagacacaaaattctgaaatcaaggagctgaggcagtcacgtgaa
atagtacttgaagacttgaaaaagcttcatgttgaaaacaacgagaaactacaactcctg
agggcagaacttgagagtttggagcaaagccatttaaaagaactggaaagcaacctacaa
gccaggcatttacaggaatttgagaaggtcctagctgagcacaaggactgtttggataaa
ttaaaaaaagagaaccagcatagacttgaacaaatgcaggaatctcatgaagtagttatg
caagagaaacaacaacaagtagaagagttacagctcaaggtttcagatctgtctgatttg
aggtgcaaactagaagttgaacttgccctgaaagaggcagaaactgatgaaatgaagctt
cttttggaagaaagcagaaaccagcaacaagagaccttaaagtctcagattgacaaggaa
actgagagcttaagaaaggagatagataaattaaacaataaaatacaaatcagcagtgat
gaatatcaagtgggcttatcagaactgaggactctgatgacaattgagaaagatcggtgt
atttctgagctagtaaatatacatgaagcagaatcaaatttgcttagaactgaattaaat
aaagtaactcttcttcatcaaaaaactgctgaggcagaaaaaaggctgtcagagcaaata
acagaactgcaaagtaagttagagttggaaatgagtgccctagagaaggaaaaaacagaa
aaattgtctctctctgagcagcaggaaaaatacgaagctattatccataagctaaaggaa
gagaaagaactgttagtatctaaccaagaacaagacaggcagttgctcattcagaagctt
aattgtgaaaaagaggatgcagtacaaactgcttgtaaagagtttgaattgcagagggaa
gctgctgaaaaagggcttttggaaaaaatacagcaacttgagatgcaagtgaatcggagt
cctccttctgaatcatctgctgagtcaaacttagtcgctgaacttcaggagaagcttcag
gaagaaaaaatgaagttcttagagcaacttgaagaacaagagaaaagaaagaatgaagaa
atgcagaacatcagaacatctctcactgcagagcagcagaccaactttaacactgttctg
gcaagagagaaaatgaaaaaagaaaacataattaatgatcttagtgacaaattaaaagtg
cttacacagcagcaagaaaaagataaggatttgattgaaacactttctgaagatcgagct
cgcttacttgaagagaagaagaagcttgaagaagaagtgaataaactaagaagtagtaat
ttttctccatcaacctacttagcagcagcatcagaagtttgtggagcctgtgcagctgat
gtgcccactgacacagacagattagttgctgactttggggctgaggggagaatggactcc
acgatggaaaccagtatgatggctgtgcatgaaaatcttcatatgtctgaagaaaagcag
aggataatgttgttagaaagaactttgcagttgaaagaagaggaaaataagagattaaat
cagagattgatgtcccaaagcatgtcgtcagtatcgtcaagacattctgaaaaaatagca
attagagattttcaggttggcgatttggttctcattatcttggatgaaaggcatgacaac
tatgtgttgtttactgtcagtccaaccttatatttcttgcactcagagtcccttgctgca
ttggatctcaaaccaggtgagtgtgcctcgggtgcatctaggcgaccttgggtgctagga
aaagtgatggaaaaggaatattgccaggcaaaaaaaggcacaaaacagattcaaagttcc
tttgggtacaaaattctacagagtgaaagcagtaccatggaacaagaaagtataacacaa
caaaattttggttcattctgtctccattcttttttgacttgtccttcagtgctcgttcat
cgctccaaataccaggccatctttttatactga
DBGET
integrated database retrieval system
