Parus major (Great Tit): 107200481
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Entry
107200481 CDS
T04864
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107200481 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107200481 (SS18)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107200481 (SS18)
GBAF(ncBAF) complex
107200481 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
107200481
NCBI-ProteinID:
XP_015474570
Ensembl:
ENSPMJG00000014736
LinkDB
All DBs
Position
2:complement(105845343..105888556)
Genome browser
AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMSQSGPPPPPRSHNMSSDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPQAGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPQQQGYPPQQQQYPGQQGYPG
QQQGYGPSQSGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgttcgcggccccgaggcagcggggcaagggcgagatcacgccggccgcc
atccagaagatgttggatgaaaacaaccatcttatccagtgcataatggactaccagaac
aagggaaagacttctgaatgctctcaataccagcagatgctgcatacaaacttggtttac
ttagccactatagctgactccaatcagaacatgcagtctctactaccagcaccacccaca
cagaatatgcctatgggtccgggcgggatgagtcagagcggccctcccccacccccgcgc
tcgcacaacatgtcttcagatggtatggtaggtgggggccctcctgcaccacacatgcag
aaccagatgaacggccagatgcctggacccaaccatatgcctatgcaaggacctggacct
aaccaactcaatatgacaaacagttccatgaatatgccttcaagtagccatgggtccatg
ggtggctataatcactcagtgccatcgtcacagagcatgccagtgcagaatcagatgaca
atgagccagggacagccgatgggcaactatgggcccagaccgaacatgaatatgcaacca
aaccaaggtccaatgatgcaccagcagcctccctcccagcaatacaacatgccacaggca
ggtggccagcattaccaggggcagcagccaccaatgggaatgatgggccaagttaaccaa
ggaaatcacatgatggggcagagacagattcctccatacaggccaccacagcaaggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggaggaaactcgcaatatggtcagcagcaagatgcatatcaaggaccaccc
cagcagcagggttatccaccgcaacagcagcaatatcccggccaacaaggctacccagga
caacagcagggttatggcccttcccagagtggtccagggcctcaatatcccaattatcca
caaggacaaggacagcagtatgggggatacaggcccacgcagcctgggccaccacaacca
ccacagcagaggccttatggatatgaccagggtcaatatggaaattatcaacagtga
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