Parus major (Great Tit): 107200491
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Entry
107200491 CDS
T04864
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmaj04131
]
107200491 (VPS50)
Membrane trafficking [BR:
pmaj04131
]
Protein recycling
Others
EARP complex
107200491 (VPS50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
MJ1674_2nd
Motif
Other DBs
NCBI-GeneID:
107200491
NCBI-ProteinID:
XP_015474583
Ensembl:
ENSPMJG00000007921
LinkDB
All DBs
Position
2:23267493..23343347
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AA seq
967 aa
AA seq
DB search
MQKIKSLMTRQGLRSPQESVNDLSPIESFRVPTKEELRELHEEPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVEELE
RVTSLQNGLQLAAVICTDGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEAEVVSSV
SDGNNMIGTEENSFDRNYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRRQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFLEQSRSPSVSPSKQPSSAISSTVTLFEQYCNGGNPFEIQADSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPIKSVSRETLKSRKRSDY
NLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DMFESTGLGLSSSRLRTTLNRIQESLIDLEVSADPSGTLAAAEERKEKVPSPHLSHLVVL
TSGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELR
KPVYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNVYVDALLKEFEEFNRRLSDVSKRV
RIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMESWIKEHREYSTKQLTNLVNICLGTYINKKARQKLLATID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccgccagggtctaagaagtcctcaggagagtgtt
aatgacctcagtcctattgaaagcttccgggttcctactaaggaggagctcagagaacta
catgaagaaccaactgatcctcaggcacaacaggaaataattaacagcattgaagaagtt
tatttttccaatgattcctttgatattgtgaaatatgagttagagagacttcctccagta
cttagtcttcaagaactggaagagtacagagacaaactaaaacaacagcaagctgctgta
tctaagaaagttgcagatttaatccttgagaaacagcctgcatatgttgaggaacttgaa
cgtgttacatcattgcagaatggccttcagctagcagcggttatctgcacagatggaaga
agacacctcaatatagcaaaggaaggcttcacacaaaccagtttggggctccttgcaaat
cagaggaaacgacagttgcttattggactgctgaagtctctgagaacaataaaaacactg
caaagaactgatgtacgtttgagtgagatgttggaggaagaggattatccaggagctatt
cagctgtgcttggaatgccagaaagccgccagcactttcaaacactacagttgtataagt
gagttaaattcaaaactgcaagacaccctggaacaaatagaggaacaattggatgtagca
ctttccaaaatatgcaagaattttgatatcaatcattatacaaaggttcaacaggcttac
aggctgcttggaaaaacacagacagcaatggaccagttacatatgcacttcacccaagcc
attcacaacaccgtgtttcaagtagtccttggatatgtggagctgtgtgcaggaaacaca
gacaccaagtttcagaaattacagtacaaagacctctgtacacatattacgtcagacagc
tacattccatgccttgctgatctctgcaaagccctctgggaagtcatgctcagttactac
cggacaatgcagtggcatgagaaccatgaccaagatgaggcagaagttgtgtcttctgtt
tcagatggcaacaatatgattggaactgaagagaacagttttgaccgcaactatgtaaaa
aagaaattggagcacggcctttcacgaatatggcaggatgttcaattgaaggtgaaaaca
tatcttctgggaacagatctgtctaacttcaaatacgatgacttcatatttgtacttgat
gttatcagcaggctgatgcaggttggagaagaattttgtggcagtaagtctgaagttttg
caagaatcaatcagaagacaaagtgttaactatttcaagacatatcacagaacccgtctt
gaagaactaagaatgtttttggagaatgagacctgggaactttgtcctgttaaatcaagc
tttagtattttgcagcttcatgaatttaagttcttggagcagtcgcgttccccatcagtg
tcaccaagtaaacagccttcctcagcaatttcatcgacggtaacgctgtttgagcagtac
tgtaacggaggaaacccctttgaaattcaggctgacagcaaagatgatgagacagaagat
gtgttggcttccaatgggtatgaatcagatgaacaagaaaaaagtgcatatcaggagtat
gatagtgacagcgatgttcctgaagagttgaaaagagattatgtggatgagcagacagga
gatgccccgataaaaagtgtttctcgagaaactctgaagagcagaaagagatcagattat
aacctcaataaagtgaatgcacctattctaaccaacactacactgaatgtaataaggctt
gttgggaaatacatgcagatgatgaatattctgaaacctattgcatttgatgtgatccac
ttcatgtcccagctctttgattactatctgtatgcagtctatacattttttggccgaaat
gacatgtttgaatcaacaggactgggcctcagtagcagcagattacgcaccacactgaac
agaatccaggagagtctgattgatctggaggtatctgctgatccttcaggaactctcgca
gctgctgaagagagaaaagagaaggttccaagcccacatctcagtcatctcgtagttttg
acatctggcaattcactgtatggcttggcagagagagtggtggccacagaatccttggta
tttctggctgagcagtttgaatttcttcagcctcatctcgatgcagtgatgccagctgcc
aagaagccttttcttcagcagttctattctcagacagtgtcaactgccagtgaactgcgt
aaaccagtttattggattgttgctgctaaagccattgattatgaacaaatgcttcttctc
atggctaatgtgaaatgggatgtgaaggaaatcatgtctcagcacaacgtatatgtagat
gctcttttaaaggaatttgaggaatttaacaggaggttgagtgatgtgtctaagagagtc
cgtattccattaccagtctccaatatcctttgggagcactgcatacgcttggccaataga
actcttgtggaaggttatgccaatgtaaagaagtgtagcaatgaaggacgtgccttgatg
caactggattttcaacagttcttaatgaaactagaaaagttaacagacattaggcctatt
ccagataaagaatttgtggagacctacattaaagcatactacctgacagaaaatgacatg
gaatcctggataaaagaacatagggaatattccactaagcagttgaccaatctggtgaat
atttgtctgggcacctacatcaacaaaaaggcaagacagaagctgttagctaccattgat
gacatagacaggcctaagagataa
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