Parus major (Great Tit): 107200530
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Entry
107200530 CDS
T04864
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107200530 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmaj01007
]
107200530 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmaj03016
]
107200530 (GARS1)
03029 Mitochondrial biogenesis [BR:
pmaj03029
]
107200530 (GARS1)
Enzymes [BR:
pmaj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
107200530 (GARS1)
Amino acid related enzymes [BR:
pmaj01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
107200530 (GARS1)
Transfer RNA biogenesis [BR:
pmaj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
107200530 (GARS1)
Mitochondrial biogenesis [BR:
pmaj03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
107200530 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
OS-D
EcoRII-C
Motif
Other DBs
NCBI-GeneID:
107200530
NCBI-ProteinID:
XP_015474654
Ensembl:
ENSPMJG00000004364
LinkDB
All DBs
Position
2:complement(3800976..3824900)
Genome browser
AA seq
685 aa
AA seq
DB search
MDGPQAEALLAPLRNAVRQQGELVRKLKEEKAPQVDIDRAVAELKARKRVLEAKELALQP
KDDIVDRVKMEDTLKRRFFYDQAFSIYGGVSGLYDFGPVGCALKNNIIQAWRHHFIQEEQ
ILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCTAE
KKAEMENVLTQLDNYGQQELADLFVNYNVKSPVTGNDLSPPVSFNLMFKTSIGPGGNMPG
YLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHF
VDPSEKNHPKFQNVADLNILLYSAKAQVSGQSAHVMRLGDAVQQGVINNSVLGYFIGRIY
LFLTKVGVSPEKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHAR
ATKVPLIAEKHLKEPRTVNIVQFEANKGAIGKAYKKDAKVVMEYLSMCDECYISDMEQLL
NEKGEFTVETEGKTFLLTKDMVTVKRFQKTLHVEEIIPNVIEPSFGIGRIMYTVFEHTFR
IREGDEQRTYFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRNGISHKVDDAAGSI
GRRYARTDEIGVAFGITIDFDTVNRSPHTATLRDRDSMRQIRAEISELPAIIRDLANGYL
TWADVEAKYPQFEGQETGKKDTIEE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggacggcccgcaggccgaggcgctgctggcgccgctccggaacgcggtgcggcagcag
ggagagttggtgaggaagctgaaggaagagaaggctccccaggttgacatagacagagca
gtagcagagctcaaagctcggaaaagggtcctagaagcaaaggagctggccttacagccc
aaagatgacatcgtggacagagttaagatggaagacactctcaaaagaaggtttttctat
gaccaagccttttctatttatggaggagtcagtggtctgtatgactttgggcctgttggg
tgtgctttgaagaacaacatcatccaagcatggagacatcactttatccaggaagagcaa
atcctggagattgactgcaccatgctcacacctgagccagttctaaagacttctggccat
gtagacaagtttgctgacttcatggtgaaagatgtgaagaacggggaatgttttcgtgcc
gatcatctcctaaaagctcacctgcagaaactgatgtctgacaagaagtgcacggcagag
aaaaaggcagaaatggaaaatgttctaacgcagttggacaattatggccagcaagagctt
gcagatctctttgtgaactacaatgtgaagtctcctgtcactgggaatgacctgtcccct
cctgtttctttcaatctgatgttcaagacctccattgggcctggaggaaacatgcctggc
tatctgaggccagaaactgcacagggaatattcctcaacttcaaacgtctgctggagttt
aaccaaggcaaattgccttttgctgctgcccagattggaaattccttcaggaatgagatc
tcaccccgctccggccttatcagagtgagggagttcaccatggcagaaattgagcacttt
gtggaccccagtgagaaaaaccaccccaagtttcagaacgtggcagatctcaacatcctc
ctgtactcggccaaggcccaggtcagcgggcagtctgcgcacgtcatgcggctgggagac
gctgtgcagcagggtgtgatcaataactcagttctcggttacttcatcggcagaatctac
ctcttcctcacgaaggtcggcgtctccccggagaagctgcgcttccgacagcacatggag
aatgagatggctcattatgcctgtgactgctgggatgcagagtccaaaacctcctatggt
tggattgagatcgttggctgtgctgatcgctcctgctatgacctttcctgccatgcccgc
gccaccaaagttcctctcatagctgagaagcatctcaaagaacctagaacagtcaacatt
gttcagtttgaggccaataagggagccattggcaaagcttacaagaaggatgccaaggtg
gtgatggaatacctttccatgtgtgatgagtgctacatcagcgacatggagcagctgctc
aacgagaagggggaattcactgttgaaactgaagggaaaacttttctattaacaaaggac
atggttactgtgaagagatttcagaaaacattacatgtggaagaaatcatcccaaatgtc
attgagccctcgtttggcattggaaggatcatgtacacagtgttcgagcacacattccgc
atccgggaaggagacgagcagagaacgtatttcagcttcccagctgttgtagcaccgttc
aagtgctccgttcttcctctgagccagaatcaggaattcatgccttttgtcaaggaatta
tccgaagcactgaccaggaacggcatctcccacaaggtggacgacgctgcggggtccatc
ggccggcgctacgcccgcacggacgagatcggcgtcgccttcggcatcaccatcgacttc
gacaccgtgaaccgcagcccgcacacggccacgctgcgcgaccgcgactccatgcgccag
atccgcgccgagatctctgaacttcctgccatcatccgagacctggccaacggttatctc
acctgggctgatgttgaggcaaagtatccacaatttgagggacaagagactggcaaaaag
gacacaatagaggaataa
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