Parus major (Great Tit): 107200556
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Entry
107200556 CDS
T04864
Symbol
RETREG1
Name
(RefSeq) reticulophagy regulator 1 isoform X1
KO
K23880
reticulophagy regulator
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmaj04131
]
107200556 (RETREG1)
Membrane trafficking [BR:
pmaj04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
107200556 (RETREG1)
ER-phagy
ER-phagy recepters
107200556 (RETREG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_RETREG1-3
Reticulon
Aquarius_N_1st
Motif
Other DBs
NCBI-GeneID:
107200556
NCBI-ProteinID:
XP_015474708
Ensembl:
ENSPMJG00000003430
LinkDB
All DBs
Position
2:77077585..77143450
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AA seq
471 aa
AA seq
DB search
MASAAVPAQPQEPEAAQERSGTAPGETEPTEVSGRAGAAAVLGETGLAVGCCIAAALSWE
RPLRSLGGFVCANLLFWFVALTPWRVYHLTSLIILGVLILQIMKDLVFSKIKGAQLWRTI
TGNWKVTDSSQDYRLRINQCISETLMNLFVFLQEMSHFKEQNPGKFCLLVCSICTFFTVL
GSYIPGVVLSYVLLLCAFLCPFLKCNEFGQKLCSKIKAVLMKLDFGIVEYINQKKKQRSE
TAKTKPTEDDSELDISALCPKVSPAIVAKELSVSDTDVSEVSWTDNGTFNLSEGYSPQTD
TSDDFDRPSDHEEAFARDLLEFPSLENGAGTNDDDDSSIGLPTQQKRRKEQTDVKADHRQ
SKERPSTAGLSLPLTSDQTFNLMSGIAGDVITAAVSAAIKDQLQSLQQVPSQAVPSLSEE
TDTEEADDFELLDQSELEQLEKELGLSQSQEAESQEKKKSSGFLSNLLGSH
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcggcggtgcccgcgcagccccaggagcctgaggccgcgcaggagcgaagc
gggaccgcgcccggggagacggagccgacggaggtgtcgggcagggccggggcggcggcg
gtgctgggagagacggggctggccgtgggctgctgcatcgcggcggcgctgagctgggag
cggcccctccgcagcctgggcggcttcgtctgcgccaacctgctcttctggtttgttgca
ttgaccccttggagagtgtatcatctgacttctctcataatacttggagtgttaattctt
cagataatgaaggatttggtattctcaaagataaagggtgcacagctttggaggaccatc
actggcaactggaaagtcaccgattccagtcaagactacagactcagaataaatcagtgc
atttcagaaacactgatgaatttatttgtatttcttcaagaaatgtcccactttaaggaa
caaaaccctggcaagttttgccttctagtctgcagcatatgtacatttttcactgtcttg
ggaagttacattcctggagttgtcctctcctatgtcttgttattgtgtgcctttttatgt
cctttccttaagtgcaatgagtttggacaaaaactgtgcagcaaaataaaggcagttctg
atgaaactagattttggaatagtggaatatatcaaccagaagaaaaaacagagatctgaa
acagcaaaaacaaaacccacagaagatgacagtgaattagacatatcagctctgtgtcca
aaggttagtcctgcaattgttgccaaagagctgtcagtgtctgacacagatgtctcagaa
gtatcctggaccgataatgggacctttaacttatctgaggggtattctccacagacagac
acatctgacgattttgaccgacctagtgatcatgaagaagctttcgccagagatctttta
gagtttccctctttagaaaatggtgccggcacaaatgatgacgatgactcaagcatcggt
ttgcccacccagcaaaaacgaaggaaagagcaaactgatgtgaaggcagatcacagacag
agtaaagagagaccatccactgcagggttatccttgcctttgaccagtgaccaaaccttt
aatttaatgagtggaattgctggcgatgtcatcacagctgcagtgtctgctgccatcaaa
gaccagctgcagtccctacagcaagttccctctcaggcagtgcccagtttgagcgaggag
acagacacagaggaagctgatgactttgaactgcttgaccagtctgagctagagcagctt
gagaaagaattgggactttcacaaagtcaagaagcagaatcccaggaaaagaaaaagtct
tcaggcttcctttcaaatctgcttggaagtcattaa
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