Parus major (Great Tit): 107200557
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Entry
107200557 CDS
T04864
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13 isoform X1
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmaj03009
]
107200557 (DCAF13)
04121 Ubiquitin system [BR:
pmaj04121
]
107200557 (DCAF13)
Ribosome biogenesis [BR:
pmaj03009
]
Eukaryotic type
90S particles
Other 90S particles
107200557 (DCAF13)
Ubiquitin system [BR:
pmaj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107200557 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_RFWD3
eIF2A
Beta-prop_IFT122_1st
ANAPC4_WD40
KNTC1_N
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
107200557
NCBI-ProteinID:
XP_015474712
LinkDB
All DBs
Position
2:131207996..131235691
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AA seq
445 aa
AA seq
DB search
MRVKVLSRNPDDYVRETKLDLQRVPRNYDPALHPFEVAREYTRALNATKLERVFAKPFLS
SLDGHRDGVNCMAKHPKSLSTVLSGACDGEVKIWNLTKRQCIRTIQAHEGFVRGMCARFC
GTSFFTVGDDKTVKQWKMESPEYGEEEEPIHTILGKTVYTGIDHHWKEPVFATCGHQVDI
WDEQRTSPKCSLTWGFDSISSVKFNPIETYLLGSCASDRNIVLYDMRKSTPLKKVILNMR
TNTLCWNPMEAFIFTAANEDYNLYTFDMRFLESPVMVHMDHVSAVLDVDYSPTGKEFVSA
SFDKSIRIFPVDKGHSREVYHTKRMQHVITVKWTSDNKYILCGSDEMNIRLWKANASEKL
GVLAPREKAAMNYNQKLKEKFQFHPQIRRIAQHRHLPKSIYCQIKEQRIMREARRRKEMN
RRKHSKPGSVPFVPERKKHIVAVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgaaggtgctgagccgcaaccccgatgactacgtgagggagaccaagctggac
ctgcagcgcgttccaaggaactatgaccctgcactgcatccatttgaggttgcgcgagag
tacacgagagctctgaatgccacaaagctagaacgtgtgtttgcaaaaccctttcttagt
tcacttgatggccacagagatggagttaattgcatggccaaacatccaaaaagtctgtct
acagtgctgtctggagcttgtgatggagaggttaaaatttggaacttgaccaagcgacag
tgcatccgcactatacaagcccatgaaggctttgttcgaggcatgtgtgcccgtttctgt
ggtacatcattcttcactgttggtgatgacaaaaccgtgaagcagtggaaaatggagagc
ccagaatatggagaagaagaagaacctattcatacaattcttgggaagacagtgtataca
ggaattgatcaccactggaaggaacctgtttttgctacctgcggccatcaggtggacatt
tgggatgaacaaaggacaagccccaagtgttctctgacttggggttttgatagcataagc
agtgtaaaatttaatcccattgagacttaccttttgggaagctgtgcttctgacaggaat
attgtgctatatgatatgagaaaatcaactccattaaagaaggttatcttgaacatgagg
acaaatacactgtgttggaaccctatggaagctttcatttttactgcagcaaatgaagat
tacaacttatatacttttgatatgcgctttcttgaatcacctgtgatggtgcatatggat
cacgtgtctgctgttcttgatgtggattattcacccactgggaaagagtttgtgtctgcc
agctttgataagtccatccgcatttttcctgtagacaaaggtcacagcagggaggtttat
cataccaaacgaatgcagcacgtcatcactgtaaaatggacttcagataacaaatacatt
ctgtgtggctcagatgagatgaatattcgtctgtggaaagctaatgcttctgaaaagctg
ggagtgcttgcaccgcgagagaaggcagctatgaattacaatcagaagctgaaggagaag
ttccagttccacccgcagatccggcgcatagctcagcaccgacacttgcccaagagtatt
tattgccaaatcaaggagcagcgcatcatgagagaggctcggcggcggaaggaaatgaat
cgtcgtaagcacagcaagccaggatccgtgccatttgtgccagagaggaagaagcatatt
gtggcagtagtgaaataa
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