Parus major (Great Tit): 107200687
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Entry
107200687 CDS
T04864
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107200687 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107200687 (CNOT10)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107200687 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
ARM_TT21_N
TPR_8
ARM_TT21
TPR_7
TPR_MalT
EMP24_GP25L
TPR_17
BLOC1_2
DUF6058
DUF948
Motif
Other DBs
NCBI-GeneID:
107200687
NCBI-ProteinID:
XP_015474990
Ensembl:
ENSPMJG00000007534
LinkDB
All DBs
Position
2:41161982..41194153
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AA seq
744 aa
AA seq
DB search
MAADKAADQGTEKHEGAGTSGITDQEKELSSSALQAFQAGNYDACLQHLNTLQDINKDDY
KITLNTAVAEFCKSNQTTTDNLRQTLNQLKNQVHSVVEEMDGLDDVENSMLYYNQAVILY
HLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYLLTYQAEKALHLLAVLEKMISQ
GNNNSKNGKSESGNNTNKDSSNQKAESGALIEVAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSANIAEHPGFMKTGECLRCMFWNNLG
CIHFAMGKHNLGIFYFKKALQENDNACAQLGMGSSDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGTSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNVVYNDGQSSAIPVASMEFAAICLRNALLLLPEDQQEPK
QENGSKTSNQLGGNTENTESSEACSNKSHEGDKFIAAPPSSPLKKQELENLRCSILACSA
YVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKQTPQCYPSSVTSARTMMLFNLGSAYCLRSEYD
KARKCLHQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVKTLSDMRK
KPVFQPVHSIQPIQMPAFTTVQRK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacaaggctgcggatcaaggtactgaaaaacatgaaggagcgggtacttct
gggattactgatcaggaaaaggagctgtcgagcagtgcattacaagcttttcaggctgga
aactatgatgcttgtttacaacacctaaatacccttcaagacataaacaaagatgactac
aaaataactttgaatactgctgttgcagagttctgtaaaagtaatcagactaccacagac
aatttgagacaaacccttaaccagctgaaaaaccaggttcactctgttgttgaagaaatg
gatggtttggatgatgttgagaacagtatgctgtactacaatcaagctgttatcctgtac
catctgcgtcagtatactgaagctatatccgttggggagaagctgtaccagttcatagag
ccttttgaagagaaatttgcccaggctgtatgcttcttgcttgtagacttatacctgtta
acttaccaagctgagaaagccttgcatctgcttgctgttctggaaaaaatgatttcacag
ggcaacaataacagcaagaatggaaaaagtgagtcaggtaataatactaataaagattcc
tcgaatcaaaaagctgaaagtggagctttaatagaggttgctaaatctaagatacatcag
tataaggtgagagcctatatccagatgaagtcattaaaagcatgcaaaagggagatcaag
tcagttatgaatacagctgggaattcagctccttctctctttcttaagagcaattttgag
tatttgagaggcaattaccgtaaagctgtcaaacttttaaacagtgccaacattgctgag
catccaggcttcatgaaaacaggtgaatgcttaaggtgtatgttctggaacaatcttggc
tgcatccactttgcaatgggaaaacacaatttaggaattttttactttaaaaaagctttg
caagaaaatgataatgcatgtgcacagctgggaatgggcagctcggatccaggtaaaaaa
ttttcagggagacccatgtgtacactactgactaacaaacgatatgagttgctctataac
tgtggaattcagctcttgcatattgggaggcccttagctgcctttgaatgcctgattgag
gcagtccaggtatatcactcaaaccctcgtctgtggctgagaatagcagaatgctgcatt
gctgccaataaagggacatcagaacaagagactaaaggtcttcccagcaaaaagggaatt
gtgcaatcaatagtaggtcaaggctaccaccgtaagatagtcctagcatcccagtccata
cagaatgttgtttataatgatgggcagtcctcagcaataccagtagccagcatggagttt
gcagcgatttgtctaagaaatgccttgctgctactgccagaagatcaacaggagcccaag
caggaaaatggatctaaaacaagtaatcagctggggggaaatacagaaaacactgaaagc
agtgaagcatgcagcaataaaagtcatgaaggggataaattcattgcagctcctccttct
tcacctttgaagaaacaggaattggagaatttaaggtgctcgatccttgcgtgtagtgct
tatgtggctctggctttgggggataaccttatggcattgaatcatgcagataaacttctg
cagcaaccaaagctctcagggtctcttaagtttctcgggcatttgtatgcagcagaagct
ctcatctctctagacagaatatctgatgccatcactcacttgaaccctgagaatgtcact
gatgtttcccttgggatctcttcaaatgagcaggatcaagggtctgacaaaggagagaat
gaggcaatggaatcttctggcaagcagacaccacagtgttaccccagttcggtcacatct
gcacgaacaatgatgttatttaaccttggaagtgcttactgcttgaggagtgaatatgat
aaggctcgaaagtgtcttcatcaggctgcttcgctgatccaccccaaagagatccctcca
gaggccatcctgctggctgtgtatcttgaattgcagaatggtaacacgcagctggcactg
cagatcatcaagaggaaccagctgctcccttctgtgaaaacactatctgacatgcggaaa
aagcctgttttccagccagtccactccatccagcccattcagatgccagctttcaccact
gttcaaaggaagtga
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