Parus major (Great Tit): 107200719
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Entry
107200719 CDS
T04864
Symbol
PEX1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107200719 (PEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmaj04131
]
107200719 (PEX1)
Membrane trafficking [BR:
pmaj04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
107200719 (PEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
nSTAND3
AAA_14
RuvB_N
AAA_5
RNA_helicase
AAA_28
DUF815
TIP49
ABC_tran
AAA_22
AAA_18
AAA_33
AAA_29
Sigma54_activat
AAA_2
NACHT
TsaE
Sigma54_activ_2
AAA_19
Bac_DnaA
Molydop_binding
APS_kinase
CoaE
DUF87
KTI12
T2SSE
Motif
Other DBs
NCBI-GeneID:
107200719
NCBI-ProteinID:
XP_015475056
Ensembl:
ENSPMJG00000007769
LinkDB
All DBs
Position
2:complement(22971040..22996471)
Genome browser
AA seq
1290 aa
AA seq
DB search
MWGCGDSGGAAAATVVLSGTRDCFLHLPPALASLLRLQQGQAVKVSCGHQSVFLSWMETR
HRDHRSENTAEINRHLAEKLGITDGEQVFLEPCSHVSSCQQVEVEPLTADDWEILELHAS
SLERHLLDQIRVVFPRAIFPVWVEQHTHVYIRIGTLVPAAPYGRLEPCTELLICPKTHGP
EENITSTPATESDILLKNFVKNNMEQEDTLKDPFAKQPYLKSGVLEQSKADANMTFGSNV
LPNIWNFIGNIFSNTSEQKQKTLCDNNEMSAFKDKLLNLIHMDSIFRVCQSQPPSVQNVS
TTHEFLKCNAVHVFPWNLEYIDLDPNPVVSYGKINELLSPRARHQEAKQNLPLEKQNHFI
NTQEKNPSNSNTGQASSEGSVVQIVWNGFEDLKSVIEYGHDGGALHAGRVWIADGLRKKL
HIEIHSTVRIKSVESIPKIPVSLTLQPKQNLHKDIHEDDVKCAFSSWLQDCTTDDHPWIM
TSTDCVHLSVKEGMEEFVLSAVHPVHIEENKSENIFMLSPSLLQKTNIQVLLHPVSRKAD
DDNQPPMTDGDKNLPYLKLSDLGGVGKLGTSLFEHISHSLLGRPLSQKLAANAVGLRSGG
VLLTGGKGSGKSTLAKAICKEAFTELDAHVEIIDCKALRGKRLVNIRKHVEEAFLEAAWR
QPSILLMDDLDHIVGVPSTPEHENSPETVQSNRLAYVLKDLMKEVISMGSLIALIATSQS
EHSLHPSLVSAQGTHVFQCFKCIRTPDQNQRREMLYSIIKKKLNSDPKDFSDLDLQCIAK
ETEGFVARDFTMLVDRAIHTCASNQNASDDGADLNLSTVDFQRALKDFTPLALRNVNLHK
PKDLGWDRIGGLKDVKQMLRDTIMLPAKYPELFASLPIRQRSGVLLYGAPGTGKTLLAGV
VARESGMNFISIKGPELLSKYIGASEQAVRDIFNRAQAAKPCIVFFDEFDSIAPRRGHDN
TGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCLYCPPPDQNSR
YEILKALSHSLSLANDVDFQDLASKTEQFTGADLKALLYNAQLEAIHTNLNLGLTQDFGS
SSDSDFSLSSMVFLNHSSGSDDSAIDGEAGLEHSLISLDMSDLLPEDPRSNIYRLYFGSS
YESELGNGTPSELSSLCLSGPNSITYDLTSITHRDVVSSQPAMFREASQEGSLENQEQQA
EHLRTEINASKANYRSKNGEDSTFNQSMLPKTTLTITQSHLMTALQGMRPSISQDDWKHF
TELYDNFQNPKKSKVQIGATFRPGQKITLA
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgtggggctgtggtgactccggtggagccgccgccgccaccgtcgttctgagcgggacc
cgtgactgcttcctgcacctgccgcccgcgctggcctcgctcctccgcctgcagcagggt
caagctgtgaaagtatcctgtggtcatcagtcagtatttttgagctggatggaaactagg
catcgagatcaccggagtgaaaatactgcagagattaacagacatttggcagagaaactt
ggcatcacagatggagaacaggtgtttcttgaaccctgttcccatgtgtcctcctgtcag
caagtagaagtggaaccactcacagcagatgattgggaaattctggaactgcatgcttcc
tcccttgaaagacatcttcttgaccagattcgagtggtgtttccaagagccatctttcct
gtctgggttgagcagcacacccacgtttacatcagaattggtacacttgtgccagcagcc
ccatatgggagattagagccatgcacggagcttctgatatgtcccaaaacacacggacct
gaggagaatatcaccagcacacctgccacagaaagtgacatcttgctcaaaaattttgtg
aaaaataacatggaacaagaagacacattaaaggatccttttgccaaacaaccttactta
aagtctggagtccttgaacagagtaaggctgatgcaaacatgacatttggctcaaatgtt
ctcccaaatatatggaatttcatagggaacattttctctaatacatcagagcagaaacaa
aagactttgtgtgataataatgaaatgagcgccttcaaagacaagctgctgaacttaatt
cacatggattccatttttagagtatgtcagtcccagcctcccagcgtacagaatgtatcc
accactcatgaatttctgaaatgcaatgctgttcacgtttttccatggaatttagaatat
attgatttggatccaaatcctgtagtatcttatgggaaaattaatgagctgctttcccca
agagcgcgtcatcaagaagcaaaacaaaatctgccacttgaaaagcaaaatcatttcatt
aatacacaagaaaaaaatccttctaattctaatactggccaagcatccagtgagggatct
gttgttcagatcgtttggaatggatttgaagacctaaagagtgtcatagagtatggccac
gatgggggagccctgcatgctggaagagtttggattgcagatggtctgcgaaaaaaacta
catattgaaatacattcaacggtccgaattaagtcagttgaatctattcctaaaattcct
gtatctcttacattgcaacccaaacagaacttacataaagatatacatgaagatgatgtt
aaatgtgcattcagttcttggctgcaggattgcactactgatgatcatccatggataatg
acaagcacagactgtgtacatctgtctgttaaagaaggaatggaggagtttgtccttagt
gcagtgcatcctgtgcacattgaagaaaataagtctgagaatatttttatgctgagtccc
agtttgctgcaaaagacaaatatacaagttcttttacatcctgtaagtagaaaagctgat
gatgacaaccaaccacctatgactgatggagacaagaaccttccatacctcaaactaagt
gatttaggaggagtgggcaaattaggaacatctttatttgaacacataagccacagtctt
ctggggcgtcctttatctcaaaagctggctgctaatgctgtgggactgcgaagtggaggg
gtgcttctcacaggaggaaagggaagtggaaagtcaacattagcaaaggccatctgcaaa
gaagctttcactgaactggatgctcatgtagaaataattgactgtaaagctttaagagga
aaaagattagtaaacataaggaaacatgtggaagaagcttttttagaggcagcatggaga
cagccatccattcttctgatggatgatcttgatcacattgttggagtaccttctacacca
gagcatgagaacagccctgaaactgttcaaagcaatagacttgcttatgttttgaaagat
ctgatgaaagaagttatttccatggggagtttgattgcattaattgctacgagtcagtct
gaacattcgcttcatccttccctggtttcagcacaaggaactcatgtatttcagtgcttc
aaatgtattcgaactccagatcagaaccaaagacgtgaaatgctgtattccataataaag
aaaaaactgaattctgatccaaaggacttctctgatcttgacctccagtgtattgcaaag
gaaacagaaggttttgttgctagagattttactatgctggttgatcgtgccattcatacc
tgtgcttctaaccagaatgcatcagatgatggtgcagatttgaacctgtcaactgtggat
tttcaaagggctctaaaggattttactccattagctctgagaaatgtcaatcttcataaa
cctaaagaccttggctgggacaggattggtggcttaaaagatgtgaagcaaatgctcagg
gataccatcatgttacctgcaaagtatccagaattatttgcaagcctgcccatacgacaa
agatcaggagttttgctgtatggagcacctggaacaggaaaaacattgttggcaggagtg
gttgcgagagagagtggaatgaatttcatcagcattaagggaccagagctgctcagcaag
tacattggagcaagtgaacaagcagttcgagatatatttaacagagctcaggcagctaag
ccttgtattgttttcttcgatgagtttgattctattgctcctcgccgaggtcacgacaac
acaggagttactgaccgagtggttaaccagttgttgactcagttagatggtgtggaaggc
ctgcaaggagtttatgtgctagctgctaccagtcgcccagatttgattgaccctgctttg
ttaaggccaggtcgactggataaatgcctgtactgtccacctcctgatcagaactcacgc
tatgaaatcttaaaagctctcagtcattccctgtccttggcaaatgatgtggactttcag
gatttggcatcaaaaacagaacagttcacaggggctgacctaaaagctttattatacaat
gcccaattggaagcaatccatactaatttaaatttaggtttaacacaggattttggatct
agttctgatagtgacttcagtctctcttccatggtttttcttaaccacagcagtggctca
gatgattcagcaatagatggagaagcggggctagagcactctcttatttctttagacatg
tctgacttgcttcctgaagatccaaggtccaacatatatcgcctttattttggaagctct
tatgaatcagagctgggaaatggaactccttcagagctgagctctctgtgtttgtccggt
ccaaactccataacttatgaccttaccagcatcactcacagagatgttgtatcctcacaa
cctgcaatgtttagagaagcttctcaagaaggatccctggagaaccaggagcagcaagca
gagcacctgaggacagaaatcaatgctagcaaggccaattacagaagcaagaatggagag
gacagcacctttaatcaatcaatgcttcccaagaccactttaactattacccagtctcat
ctgatgactgctcttcagggtatgagaccatccattagtcaggatgactggaagcatttc
actgaactgtatgataattttcagaatcccaagaagagtaaagtacagattggtgcaaca
ttcagaccaggacaaaaaattactctagcttag
DBGET
integrated database retrieval system
