Parus major (Great Tit): 107200806
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Entry
107200806 CDS
T04864
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 1B
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107200806 (KDM1B)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
107200806 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Thi4
DAO
SWIRM
Pyr_redox_2
Pyr_redox
FAD_binding_3
Pyr_redox_3
HI0933_like
FAD_binding_2
FAD_oxidored
Lycopene_cycl
2-Hacid_dh_C
GIDA
NAD_binding_9
AlaDh_PNT_C
IlvN
NAD_binding_7
ThiF
YjeF_N
Shikimate_DH
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
107200806
NCBI-ProteinID:
XP_015475248
Ensembl:
ENSPMJG00000018198
LinkDB
All DBs
Position
2:complement(60707099..60734060)
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AA seq
820 aa
AA seq
DB search
MSTGRVRTKKKASSSDQSPDNLPVRSSGRQVKKKAAEAADDDDEASEKKYRKCEKAGCTA
TCPVCFASAAERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYEKYTAWKRIWTSN
GKSEPSPKAFMADQQLPYWVQCTKPECGKWRQLTKEIQLTPQIAKTYRCGMKLNNSTKTE
GSDQCSMPEDLRVAEVSDHWWYSMLILPPLLKDSVAAPFLAAYYPDCVGMSPSCTSTNRL
PGESNLVKLEHLKSVPNVTVAGMNKYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSR
DPTMYLALRNLILALWYTNCKEALTPQKCIHHIIVRGLVRIRCVQEMERILYFMTRKGLI
NTGILSVSPDQYLLPKEYHNKSVIIVGAGAAGLAAARQLHNFGIKVIVLEAKDRIGGRVW
DDKTFTGVTVGRGAQIVNGCVNNPMALMCEQLGIKMHKLGEKCDLIQEGGRITDPTIDKR
MDFHFNAILDVVSEWRKDKTQHQDVPLGEKIQEIYKAFIQESGIQFSELEEKVLQFHLSN
LEYACGSNLSQVSARSWDHNEFFAQFAGDHTLLTVGYSTVIDKLAEGLDIRLNFPVQSID
YSGEEVQVTTADGTVWTTQKVLVTVPLALLQKNVIQFNPPLSEKKIKAINSLGAGVIEKI
ALQFPYRFWDSKIQGADFFGHVPPNSSQRGLFSVFYDMDPEGKESILMSVVTGDAVTTIK
NLDDQQVLQQCMTVLRELFKEQEVPDPVKFFVTRWSNDPWLQMAYSFVKTGGSGEAYDMI
AEDIQGKVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaggaagggtacgaacaaagaaaaaggcatcttcttcagatcagtctccggac
aaccttcctgtgaggagttctggaagacaggtgaagaagaaagcagctgaagcagcagat
gatgatgatgaagcctcagagaagaaatacagaaagtgtgaaaaagctggatgcactgca
acatgtcccgtttgctttgccagtgcagcagaaagatgtgcaaaaaatgggtatacatct
agatggtaccatctgtcctgtggggaacacttctgcaatgaatgttttgaccactattac
cgaagccataaagatggttatgagaaatacactgcctggaaaaggatttggacaagcaat
ggtaaaagtgagcccagtccaaaagcctttatggctgatcaacagcttccttactgggta
cagtgcacaaagccagaatgtggtaaatggcgtcagctgacaaaggaaatccagctgaca
ccacaaatagcaaaaacctacagatgtggtatgaaactgaacaattccaccaagactgag
ggctcagaccagtgttccatgcctgaggacttgagagtggctgaagtttcagaccattgg
tggtactccatgctcatactccctcctttgctgaaagacagtgtggcagctccctttcta
gctgcatattatccagactgcgtgggcatgagtccatcctgtaccagcactaatcggtta
cctggtgaatccaaccttgtgaagttagagcacttaaagagcgtgcctaatgtgactgtt
gcaggcatgaacaagtatttccagcctttttaccagcccaatgaatgtgggaaagcactt
tgtgtgaggccagatgtcatggaactggatgagctctatgagttcccagaatattcacga
gaccctaccatgtacctggcattgagaaacctgattttggctctgtggtacacaaactgc
aaggaggctctcacccctcaaaaatgtatccaccatataattgttcgggggcttgttcgg
atccgctgtgtacaggaaatggagaggatcctgtattttatgacaaggaaagggctaatt
aatacagggattttgtctgtcagtcccgaccagtaccttcttcctaaggaataccacaat
aaatctgtcattattgttggagctggtgcagcaggattagcagcagcccgacaactgcac
aactttggaattaaggtcattgtcttagaagctaaagacagaattggaggccgagtgtgg
gacgataagacattcacgggagtcactgttggaagaggcgcacaaatcgtcaatggatgt
gtcaacaaccccatggcactaatgtgtgagcaacttggcattaaaatgcacaaactaggg
gagaaatgtgacttgatccaggaaggtggaaggataacagatcccactattgataaacgt
atggactttcatttcaatgccatcctagatgttgtctctgagtggaggaaagataaaacc
caacatcaagatgttcctcttggtgaaaaaatacaagagatctataaagcctttattcag
gagtctggtatccagttcagtgagctggaagaaaaagtactacagttccatctcagtaat
ttggaatatgcctgtggcagcaatctctctcaggtatctgcacgctcatgggaccacaat
gaattttttgcacagtttgctggagatcacactcttctaactgtgggatattcaactgtg
attgacaagttggcagaagggctggacatccggctcaatttcccagttcagagtattgac
tattctggtgaagaagtgcaggtcactactgcagatggaacagtgtggacaacacaaaag
gtattagtgactgtaccactggcccttcttcagaaaaatgtcattcagtttaatcctcca
ctttcagaaaaaaaaattaaagccattaatagtttgggagcgggagtcattgagaaaatt
gctttgcagtttccatatagattttgggacagtaaaattcaaggagctgatttttttggt
catgttccacccaattccagccaacgtgggctctttagtgttttctatgatatggatcca
gagggaaaagaaagcattttaatgtcagtggtcactggagatgctgtgacaaccattaag
aatttagatgatcaacaagtactgcaacaatgcatgacagtactccgagagctgttcaag
gagcaggaggttcctgacccagtgaagttttttgttactcgatggagcaatgacccttgg
ctgcagatggcctacagttttgtgaaaacagggggcagtggtgaagcttatgacatgata
gctgaagacatccaaggaaaagttttttttgctggtgaggccacaaataggcactttcct
cagactgttacaggagcttacttgagtggggttcgagaagccagcaaaatagcagcattt
taa
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