Parus major (Great Tit): 107200880
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Entry
107200880 CDS
T04864
Symbol
TGIF1
Name
(RefSeq) homeobox protein TGIF1 isoform X1
KO
K19383
homeobox protein TGIF1
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
107200880 (TGIF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaj03000
]
107200880 (TGIF1)
Transcription factors [BR:
pmaj03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
107200880 (TGIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Homez
Motif
Other DBs
NCBI-GeneID:
107200880
NCBI-ProteinID:
XP_015475427
Ensembl:
ENSPMJG00000014660
LinkDB
All DBs
Position
2:complement(102560748..102572655)
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AA seq
367 aa
AA seq
DB search
MSQAAGANRQQKGTKGRGGGKPTPAAPKSPRGRQSPAAPADSSATADRAPGSAAVFLLSS
STFCSSPSLKGESSVRRRERNLGLCVGCPAIGSVLAIKMKSKKGVVAISGSETEDDDTMD
VPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSRQTHLSTLQV
CNWFINARRRLLPDMLRKDGKDPNQFTISRRGTKLPEGGLVESAISTKNYIPLLEETAFL
PAAAPLGKTVSSSKPASPGSVLARPSVICHTTVTALKDGPFHFCQPADVGQTTDLQQPPA
GGFTDNPLSCHEDASKLGPGANTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEME
LQAKLMA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagctgccggggccaatcgccagcagaagggaacaaagggaagggggggaggg
aagcccaccccggccgcaccaaaaagcccccgggggaggcagagccctgcggctcccgct
gacagcagcgcgaccgcggatcgggcgcctggctccgcggcggtgttccttctttcttca
tcgaccttctgctcctcgccgagcttaaagggggaaagcagcgtccggcgaagggagaga
aacttgggtctgtgcgtggggtgtccggcgatcggctcggtcctcgcgatcaagatgaaa
agtaaaaaaggtgtagttgcaatatcaggcagtgaaacggaggatgatgacactatggat
gtcccactggatctttcctcatctgctggctcgggcaaacggcggagacgtggcaacctg
cccaaggagtctgtgcagattcttcgggactggctctatgagcaccgatacaatgcttac
ccttcagagcaagagaaagcgctgttatcccgacaaacacacctttccacactacaggtc
tgcaactggtttatcaatgcacgccgcaggctgttacctgacatgctgaggaaggatggc
aaagacccaaatcagttcactatctcgcggcgagggaccaagcttcccgagggcggcctg
gtggagtctgccatcagcacaaagaactacattcccctgctggaggagactgccttcctt
cccgctgccgcaccgctcggcaagactgtgtcctcttccaagccggcttccccggggtcg
gtcctggctcggccgtcggtgatttgccacacgactgtgactgcgttgaaagatggccct
ttccacttttgccaaccagctgatgtaggccagaccacggacctgcagcagcccccggct
ggcggcttcacagataaccccctctcctgccatgaggacgcatccaaactgggacctggt
gcaaacacacaaagtgggctctttaacactcctcctccaacaccaccagaccttaaccag
gattttagtggatttcagcttctggtggatgttgcactcaaaagggcggcagagatggag
ttgcaggcgaaacttatggcctaa
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integrated database retrieval system
