Parus major (Great Tit): 107200945
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Entry
107200945 CDS
T04864
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
107200945 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107200945 (TRIP13)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
107200945 (TRIP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
nSTAND3
AAA_16
Viral_helicase1
AAA_18
AAA_14
IstB_IS21
NACHT
AAA_25
AAA_5
NPHP3_N
AAA_24
AAA_28
RuvB_N
ATPase_2
RNA_helicase
TsaE
DUF815
Cytidylate_kin
AAA_33
AAA_30
bpMoxR
AAA_11
AAA_7
ABC_tran
AAA_17
TIP49
PduV-EutP
Rad17
ATPase
AAA_19
Mg_chelatase
PhoH
SLFN-g3_helicase
nSTAND_NTPase5
NB-ARC
NTPase_1
AAA_3
AAA_6
nSTAND6
Motif
Other DBs
NCBI-GeneID:
107200945
NCBI-ProteinID:
XP_015475554
Ensembl:
ENSPMJG00000018139
LinkDB
All DBs
Position
2:56479469..56491527
Genome browser
AA seq
432 aa
AA seq
DB search
MDDAAGDLKQALPNVCDSVQIHVEVVQKSSSVAKKEDIRMSVLKLLNRHNIVFGDYKWTE
FDDAFLNNNVQSVSIVDTELKLKDRQPIDLSMSSLCLHIFHLNEEGPTSENLEEENEDIT
AAHHWVLPAAEFHGLWESLIYDTEVKSNLLDYVTTTLLFSDKNVDSNLISWNRVVLLHGP
PGTGKTSLCKALAQKLAIRLSYRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQELV
DDRDALVFVLIDEVESLTAARSAFKAGTEPSDAIRVVNAVLTQIDQIKRYPNVVILTTSN
ITEKIDMAFVDRADIKQYIGPPSIAAIFRIYLSCLEELMKCQIIYPRQQLLTLRELEMIG
FVENNVSRLSLVLKEISRKSEGLGGRVLRKLPFLAHALYIQSPSVTMSTFLQALSLAVDK
QFEEKKNLADFV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgccgctggagatttgaagcaagcgctaccaaacgtgtgtgacagcgttcag
atccacgtggaagttgtccagaagtcgagcagtgtggccaagaaagaagatattaggatg
agtgtcttaaagctgttgaacagacacaacattgtgtttggtgattacaagtggacagag
tttgacgacgctttccttaacaacaacgtgcagtctgtgtcgattgtggatacggagctg
aaactgaaggacagacagcctattgacctgagcatgagcagtctttgtcttcatattttt
catctgaatgaagaaggaccaacctctgaaaacctggaggaagagaatgaggatatcact
gcagctcaccactgggtgctgccagcagctgaattccatggcctttgggaaagtcttatc
tatgacactgaagtaaaatcaaacttactcgattatgtgacgacaacattattattttct
gacaaaaatgttgacagcaacctgatatcatggaacagagttgttttgctgcatggccct
cctggaactgggaaaacttctctctgtaaagcactggctcagaaactggcaattcgactg
tcatacaggtatagatatggacagttaattgagataaacagccatagccttttctctaaa
tggttttctgagagtggcaagcttgtaaccaagatgttccagaagatccaagagttagtt
gatgacagagatgctcttgtatttgtactgattgatgaggtggaaagcctcacagcagcc
cgcagtgccttcaaggcaggcacagagccttcagatgctattcgtgtggtcaatgctgta
ctgacacaaatagatcagattaaaaggtatcccaatgtagttatcctgactacttcaaat
attacggagaaaattgacatggcttttgtagacagggctgacataaaacaatacattgga
cctccatctatagcagcaatatttagaatatatctttcttgcctggaagaactgatgaag
tgtcaaataatatatcctcgacagcagcttctgacactcagagagcttgagatgattggc
tttgtagaaaataatgtgtcaaggttaagccttgtactaaaagaaatctcaagaaaaagt
gaaggtcttggtggccgggtcctgagaaagcttcctttcctagcacatgcactttatatt
caatcccccagtgttacaatgtcaacttttcttcaggccctttcccttgcagtagacaaa
caatttgaagaaaaaaagaatcttgcagacttcgtgtga
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