Parus major (Great Tit): 107201224
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Entry
107201224 CDS
T04864
Symbol
FANCL
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03460
Fanconi anemia pathway
pmaj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107201224 (FANCL)
09124 Replication and repair
03460 Fanconi anemia pathway
107201224 (FANCL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmaj04121
]
107201224 (FANCL)
03400 DNA repair and recombination proteins [BR:
pmaj03400
]
107201224 (FANCL)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107201224 (FANCL)
Ubiquitin system [BR:
pmaj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107201224 (FANCL)
DNA repair and recombination proteins [BR:
pmaj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
107201224 (FANCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d2
FANCL_d1
zf-RING_2
SLX1_C
PHD_NSD
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
107201224
NCBI-ProteinID:
XP_015475891
Ensembl:
ENSPMJG00000014437
LinkDB
All DBs
Position
3:complement(2355318..2376985)
Genome browser
AA seq
353 aa
AA seq
DB search
MAGARALLRHCPLLLPQDRRGTAYEGFVTAQGRDFHIRILLPVDLQLKNARRLQSCPDLV
SFMVELKTVLEIALKNTQDLHIPRPPEYYSCLVRDLEILGWNRVAYVDTGLTTVKLKAED
SCGRQHVITLKLNAKYPTEPPDCLVDFPVPFAVSWMPQNSLIDIYNQFLAALESLKEFWD
ALDEIDGKTWVLEPENPTRSATTRRIAIGNNVSVNVEVDPRHPNMLPECYFLGADHEVNP
LRAKLNNNMHLWDPEISLLQNLRELLEIDFPSRAMLEKSDFAKDCGICYAYRLDGSAPDQ
VCDDPRCGQPFHQACLYEWLQGLPTSRQSFNVIFGECPYCNKPLTLKSSMKKL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcgcgggctctgctccggcactgcccgctgctgctgccgcaggaccgccgc
ggcaccgcctacgagggctttgtcactgcccagggtagagacttccacatcaggatactg
ctaccagtggatttgcaattgaaaaatgccaggaggctgcagagctgcccagatcttgtc
agctttatggtggaactgaaaactgttttggaaattgctttaaaaaacacacaagacctg
cacatcccacggcctccagaatactactcctgtcttgtcagagatctagaaatactgggc
tggaatagagtggcctatgtggacactgggctgaccacagtcaagttaaaagctgaagac
tcttgtggtcgacagcatgtcatcaccctcaagttaaatgcaaagtatcctacagaacca
ccagattgccttgtggattttcctgttccatttgctgtttcctggatgccacagaactcc
ttaatagacatttacaatcagttcctggcagcattggagtccctgaaggaattctgggat
gccctggatgaaatcgatgggaagacatgggtgcttgagccagaaaatcccacacggagt
gctacaaccagaagaattgcaatagggaacaatgtctcagtgaatgtagaggtagatcct
cgccatccaaacatgcttccagagtgttatttccttggagcagaccatgaagtgaaccct
ctgagagcaaaactcaacaacaacatgcacttgtgggatcctgaaatcagcttgttacaa
aacttaagagagctcctggaaattgattttccatctcgtgccatgttggaaaaaagcgac
tttgccaaggactgtgggatctgctacgcctatcggctggacggcagcgcgcccgaccaa
gtgtgtgatgatcctcgctgtgggcagcccttccaccaggcctgtctctatgagtggcta
caaggccttcccaccagcaggcagagttttaatgtcatctttggtgaatgtccctattgt
aataagcccctgacactgaaatcttcaatgaagaaactctag
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