Parus major (Great Tit): 107201611
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Entry
107201611 CDS
T04864
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmaj03016
]
107201611 (TARBP1)
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107201611 (TARBP1)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
107201611 (TARBP1)
Transfer RNA biogenesis [BR:
pmaj03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
107201611 (TARBP1)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107201611 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
Motif
Other DBs
NCBI-GeneID:
107201611
NCBI-ProteinID:
XP_015476599
Ensembl:
ENSPMJG00000003899
LinkDB
All DBs
Position
3:complement(43728547..43760812)
Genome browser
AA seq
1581 aa
AA seq
DB search
MEVVLADTLLSRCGDRAALLRALSAPLSAERAEALRLLLQRLAAAVPAAAAGEAEALRRA
AWEVALERCRPLLRGGEGAAGSAERARAVRGALRHCVQLCGPPLAARLARDALAELAAGG
GAGAEEAAVEALAAAVPRLEEPELLSRCAAAALALVREEGEGEAAAALVAGRLLPALGAN
GAALPRVWEGLLGAGGAPRAGRALLALSALADALLPRGPAGSGLDARLCPRFWRLVQEGL
TERDGLCRKRARYLLKRALDLSVGQRAELRCPQDGGHEPSLFWWSAEKTEQLLQFWETYI
LIMETLEGNQIHVIKPVLPKLNSLYELAISGDKGRWLFHPSWHVCIYRRMFESENKTLTK
EGILHFLELYETKHLPNSLGFSEFVIGPLMDALSESSLYSRIPGQSIGDCPPLGMKLQKF
LATYFTLLPEEEKGSFLLKFIQKMTSRHWCAVPILFLSMALASIPSCKVLGAEGLHALRD
VLQCTMITHQILLRGAAQCYLLQTTMHLTDVEKVSFPEVSSFLLSLRPEESLRRDTLLWT
ELCSWLQVNDRCFRKSVTSDLERQEASSLCQYVRSLVGEYLKTPAAERENCFMPDWFEAK
LVSTMILLAADVEQMKSKYSGKSNIEWIELEAFLNPLLDVLMKLGSNAYIPTLKTDKSLQ
LLLKLLQTRSLKCSNTQDDEVLSFIWKSLVTPVESILEFVLRRLTANELSTVGDLDRCDL
YLALIPEMVSLCLKVNWKKIPSIKNFLSSLVNASIRNLQERNSEKEPKVKEQIRKVASMA
SLAAVCEIMAGKLEVHLEPLPSVDALKKFISFSQFNEVLKKPSYIEEKNSLGEETTSQGW
GKIVARYVRDQWICLHFILNSFVTSAQGYETTSVMSLSTVERSKEILQSALEALSILPSD
QVLPVFDCMKVLVPKLLDSSEGLCIEAFDLAWKIISSLSNTQLIFWANLKAFVQFIFDSE
VLAVAASAKGQAYTKIKEIIFKLIDLSTTKTGVFNVVLSHCCQSWIFPTVDERSALTNAF
LNAGNYSELITEACVFGTVFRRDQRHIQDVHAFIEDIGEKCAANVVTESPNRDDHYVRIC
AVKFLCLLDGSNNLHKMFMEDIFIKLLDKDEEVSRSRTRYYANSLQHRIKNRVWQTLLVL
LPKLNQNFLCGTLDRVFLAGFSNNQASVKYFIEWIVILSLHKYPQFLDKFWDCFCYDEEN
LKKSICTFLSVLAHFDIILQNTSEKKPALKKALVVVLQWCFSHNFSVRLYALVALKKIWG
MCRMLHVEEFDALTPVIESSLQQVENMHGTGNAKRNWQRIQDHFFFAIFHPVEDYSLETI
FYTLPRLSELAEDEWISLSKFDRFTDIPLPAAFRWCQSRAELCDLKPSDWAQQDMGSHSA
EADSQPEWTDVQKKIIPWKNSTPSLDLETTFQDRAAKLGKSNSRLIVVASLIDKPTNLGG
LCRTSEIFGASALVVGSLHYIQDKQFQHLSVSAEQWLPLVEVKPSQLVDYLQQKKTEGYT
IIGVEQTAKSFDLTEYCFPEKSLLLLGNEHEGIPANLIHHLDVCVEIPQQGIIRSLNVHV
SGALLIWEYTRQQVIKQKQQQ
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggtgctggcggacacgctgctgtcccgctgcggggaccgcgccgcgctgctg
cgggcgctcagcgcgccgctctccgccgagcgggcggaggcgctgcgcctgctgctgcag
cgcctggcggcggccgtgccggcggcggcggcgggcgaggcggaggcgctgcggcgggcg
gcctgggaggtggcgctggagcggtgccggccgctgctgcggggcggggagggcgcggcg
gggagcgcggagcgggcgcgggcggtgcggggcgcgctgcggcactgcgtgcagctctgc
gggccgccgctggctgcgcgcctcgcccgcgacgcgctggccgagctggcggcgggcggc
ggggcgggcgcggaggaggcggcggtggaggcgctggcggcggcggtgccgcggctggag
gagccggagctgctgtcgcggtgcgcggcggcggcgctggcgctggtgcgggaggagggc
gagggcgaggcggcggcggcgctggtggccgggcggctgctgccggcgctgggcgcgaac
ggcgcggcgctgccccgcgtctgggaggggctgctgggcgcgggcggggcgccgcgggcc
gggcgggcgctgctggcgctgagcgccttggcggacgcgctgctgccgcggggcccggcg
gggtcggggctggacgcgcggctgtgcccgcggttctggcggctggtgcaggagggcctg
acggagcgggacgggctgtgccgcaagcgggcccgctacctgctgaagcgagcgctggac
ctgagcgtcggccagcgggccgagctgcgctgccctcaggacggcggacacgaaccgagt
ctgttttggtggtctgctgagaagaccgagcaactcctacagttttgggagacttacatt
ttgataatggaaactttggaaggaaaccagatccacgtcataaagccagtattaccaaaa
ctaaacagtttatacgagcttgccatatcaggggataaaggccgttggctgtttcaccca
tcgtggcatgtgtgcatttacagacggatgtttgagagtgagaataaaacattgaccaag
gaaggaattcttcattttctggagctttatgaaacaaagcatcttccaaattcgcttggt
ttctcagagtttgttattggaccactaatggatgccctctcagaaagttccctctacagc
aggataccaggtcaatcaataggagactgtcctcctttgggaatgaagttacagaagttt
ttggctacttatttcactcttcttccagaggaagaaaaaggtagcttcctgttaaaattt
attcagaagatgacaagtaggcattggtgtgctgttcctattttgttcctttctatggct
ttggcatctatcccttcatgtaaagtacttggtgctgaaggacttcatgctttaagagat
gtcctccagtgtactatgattacacatcagattttgttgcgtggagctgctcagtgctat
cttcttcaaacaactatgcatttgacagatgtggagaaagtgtccttcccagaagtttca
agctttcttctgtccctcagaccagaggagtccctaagaagagatactttattatggaca
gagctttgcagttggttgcaagtgaatgacaggtgcttcaggaagtctgtaacctctgat
ttggaacgtcaggaggcatcatcgttatgtcaatatgtgcgcagtcttgttggggagtac
cttaagacacctgcagctgaaagagaaaattgctttatgcctgactggtttgaagctaag
cttgtctcaacaatgattctgttggctgctgacgtggagcagatgaagagtaaatacagt
ggaaaaagcaacatagagtggattgaactagaggctttcttgaaccctcttctggatgtc
ttgatgaaacttggcagtaatgcttacataccaacactgaaaacagataaaagccttcag
cttctcttgaagttattgcagacccgttcgttaaaatgttccaatacgcaagatgatgag
gtactgtcctttatctggaaatctcttgtgacacctgtggagagtattcttgaatttgtt
ctccgacggctgactgccaatgaattgagcactgttggcgacctggaccgttgtgatctg
tacttggctttaattccagagatggtcagtttgtgcttgaaagtcaactggaagaaaata
ccatctatcaagaatttcctttcatccttagtaaatgcatctattcgtaatcttcaggag
agaaattctgaaaaggagccgaaggttaaggagcaaattagaaaagtggctagcatggct
tcacttgcagctgtatgtgagataatggctgggaaactggaagtgcacctggagcctctg
ccttctgtggatgctctgaagaaattcatttccttttctcaattcaatgaagtattaaag
aagccgtcttacattgaagaaaaaaatagcttaggtgaagaaacgacctctcaaggatgg
gggaagattgttgcacgctatgttcgtgaccagtggatttgcctccacttcattttaaat
tcatttgtaacatcggctcaagggtatgaaacaacttcagtaatgtcactgtctacagtt
gagaggtcaaaagaaattctacagtctgcattagaagccctatctattcttccttcagac
caagttttacctgtgtttgactgcatgaaagtccttgttcccaagcttctggactcatca
gagggtctctgcatagaagcatttgatttggcttggaaaattatatcctctttgagcaac
acacagctaatattttgggccaacctaaaagcttttgttcagttcatctttgatagtgag
gttctagctgttgctgcaagtgcaaaaggtcaagcatataccaaaataaaagagataatt
ttcaagctcatagatctgtccactacaaagactggagtcttcaatgtagtccttagtcat
tgttgtcagtcttggatatttcccactgttgatgagagaagtgccttgacaaatgctttc
ttaaatgctggaaattacagtgaacttatcactgaggcttgtgtctttggaactgtattt
aggagagatcaaagacacattcaggatgtgcatgccttcatagaagatattggagaaaaa
tgtgcagcaaatgttgttacagaaagtccaaatcgagatgatcactatgttcgcatttgt
gctgttaaatttctgtgcttgttggatggatcaaataacttgcataagatgttcatggaa
gacattttcatcaagctactcgataaggatgaagaggtgtccagatctagaacacgctat
tatgcaaactctttgcagcatagaattaaaaaccgggtatggcagacactcttagttctt
ctcccaaagcttaaccagaattttttgtgtggaactcttgacagagtttttctggctgga
tttagtaataatcaggcatctgtgaaatacttcatagaatggattgttatcttgagtcta
cataaatatccccaattcctcgataaattctgggattgcttttgctatgatgaagaaaat
cttaaaaaaagtatctgcacatttttatcagtattggcccactttgacatcattcttcaa
aatacctcagagaagaagccagctttgaagaaagccctcgtagttgttctgcagtggtgt
ttcagccataatttcagcgttcgactttatgcattagtcgcccttaaaaaaatctgggga
atgtgcagaatgctgcatgtggaagaatttgatgctctgacaccagttattgaatctagc
cttcaacaagtggaaaacatgcacggcacagggaatgccaagaggaactggcagcgaatc
caagatcacttcttctttgcaatatttcatccagttgaggattatagtctagagacgata
ttttacactctcccccgcctttcggaactcgctgaagatgaatggatctccctctctaaa
tttgacaggttcactgacattcctttgccagcagcatttcggtggtgccagtcccgagcg
gaactttgtgatctgaaaccaagcgattgggctcagcaagacatgggttcacattcagct
gaagcagacagccagccagagtggactgatgttcagaagaagattataccctggaagaac
agtactcctagtttagacttggaaacgacatttcaggatcgtgctgctaaacttggcaaa
tcaaacagcagattgattgtggtggcctcacttattgataaacctaccaatttaggaggt
ttatgtcgtacaagtgaaatatttggggcatctgcactagttgttggcagtcttcattat
atacaggataagcagtttcagcatctgagtgtttctgcagagcagtggctcccccttgtt
gaggtgaaaccatctcagcttgttgattatttacagcagaaaaaaacagaaggctacact
attattggtgtggagcagacagctaaaagttttgatcttacagaatattgcttcccagag
aaatcactattactgctgggaaatgaacatgaaggaatcccagccaacctgattcaccat
ctggatgtctgtgtggaaattcctcagcagggcattattcggtcactcaatgtccatgtg
agcggagctctgctgatctgggagtacacaaggcaacaagtgatcaaacaaaaacaacaa
cagtaa
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integrated database retrieval system
