Parus major (Great Tit): 107201779
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Entry
107201779 CDS
T04864
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04517
IgSF CAM signaling
pmaj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107201779 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107201779 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmaj04812
]
107201779 (SPTBN1)
Cytoskeleton proteins [BR:
pmaj04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
107201779 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
107201779 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SLATT_6
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
107201779
NCBI-ProteinID:
XP_015477053
Ensembl:
ENSPMJG00000014416
LinkDB
All DBs
Position
3:1304880..1419943
Genome browser
AA seq
2360 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEA
GYKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQ
ILSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERI
KDIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYST
QSLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAESPDVQGRLSGIEERYKEVAELTR
LRKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMN
NQASRVAVVNQIARQLMHSGHPGEKIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWDELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITESSPNAE
VIQQRLADLKQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPP
TPEPKVAEDGDSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSSKE
SSPVPSPTSDRKAKGGVQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRSWH
NVYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKDAVCEVAVDYKKKKHVFKLRLTDGN
EYLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSPGK
REKDKEKDKEKRFSLFGKKK
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacggtagcgacagattacgacaacattgaaatccaacagcagtacagcgat
gtcaacaaccgctgggatgtcgatgactgggacaatgagaacagttctgctcggctgttt
gagcgctcccgcatcaaggccctggctgatgaacgtgaggcagttcagaagaagaccttc
acaaagtgggtgaattcccacttggctcgtgtgtcctgccgaattacagacctgtacact
gaccttcgagatgggaggatgctcatcaaactcctggaagtgctttcaggagagagactt
cctaaaccaactaaaggaaggatgcgcatccattgcctggagaatgtggataaagccctc
cagttcctgaaagagcagcgagtgcacctagaaaacatgggatctcatgatattgtggat
gggaatcacaggctgacacttggtcttatttggacaattatcctgagattccagatccaa
gatatcagcgttgaaactgaggacaacaaagagaagaaatctgctaaagatgctttgctt
ttgtggtgccagatgaaaacagctgggtaccccaatgtcaatatccacaactttacaaca
agctggagggatgggatggcattcaatgcactgatccataagcacaggcctgatctgatt
gactttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gcagagcagcaccttggtcttaccaagctcctggaccctgaggatatcagtgttgaccac
cctgatgaaaagtcaatcatcacctatgtggtgacatactaccactacttctccaagatg
aaagctttggctgtcgaaggaaaacgtatcggaaaggtgcttgacaatgctattgaaaca
gagaaaatgatagaaaaatacgagtccctggcttctgacctgctggagtggattgagcaa
accattatcatcctcaacaatcgcaaatttgccaactccctggttggggtgcagcagcag
ctgcaggcgttcaacacttaccgcacagtggagaaaccacccaaatttacagaaaaagga
aacctggaagtgctgctttttaccatccaaagcaaaatgagagccaacaatcagaaagtg
tacatgccgagggagggcaaactcatctctgacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacggagattcgatcgcaaggcagctatgagagaaacttggctgagcgaa
aatcaacgtcttgtttctcaggacaattttggctttgacctcccagcagtggaggctgcc
acgaagaagcacgaggccatcgagacggacatcgccgcctacgaggagcgggtccaggcc
gtggtggcggtggcgaaggagctcgagactgaaaactaccacgacatcaaacgcatcact
gcgaggaaggacaatgttatccgcctgtgggagtatctcctggagctgctccgggcacgg
agacagcggctggagatgaaccttgggctgcagaagattttccaggaaatgctgtacatt
atggactggatggacgagatgaaggtgctcctgctgtcccaagactacggcaagcatttg
ttgggggttgaagacctgctgcagaaacacgctctggtggaagctgacattgctatccag
gctgagagagtgagaggggtcaatgcctctgctcagaagtttgccaccgatggagaagca
ggttacaagccctgtgatccacaggtgatcagggaccgcgtggctcacatggagttctgc
taccaggagctctgccagctcgcggccgagcgccgcgcgcgcctcgaggagtcccggcgc
ctctggaaattcttctgggaaatggccgaagaggaaggctggatcagggagaaggagcag
atcttgtcatctgatgactacgggaaggacctaaccagcgtcgtccgactcttgagtaaa
cacaaggcctttgaggacgagatgagtggccgcagcggccactttcagcaggcgataaaa
gaaggtgaagacatgatcgcggaagagcattttgggtctgagaagatcagagagagaatc
aaagatatccgggagcagtgggctaacctggagcagttatctgccattaggaagaagcgg
ctggaggaagcctctctccttcaccagttccaggccgatgctgatgatattgatgcgtgg
atgttggacatcctcaagattgtctccagcaatgacgttggccacgatgaatattccact
cagtccttggtcaagaaacacaaagacgtggctgaagagattgcgagttaccggccgacc
atcgactctctccacgagcaggccaaggccctgccgcaggagcacgcggagtctccggat
gtgcagggcaggttgtccggaatcgaggagagatacaaagaggttgctgagctgacccgg
ctgcgtaaacaggccctgcaggataccctcgctctctataagatgttcagtgaggcagat
gcttgtgagctttggattgacgaaaaggagaagtggctgaataatatgcagattccagag
aagctggaggacctggaagtgatccagcacaggtttgaaagcttggagccagaaatgaac
aaccaggcgtcccgtgtggccgtggtgaaccagattgccaggcagctgatgcacagtggc
caccctggggagaagatcaaagcacagcaagataaactcaacacaaggtggagccagttc
agagaactggtagataggaagaaggatgctctgctctctgctctgagtatccagaactac
catcttgaatgtaatgaaaccaaatcctggatcagggaaaagaccaaagtgattgaatcc
acacaagacctgggtaacgacctggctggagtgatggccttgcagaggaagctgacgggc
atggaacgggacctggtggccatcgaagccaagctcagtgacctgcaaaaggaggcagag
aagctggaatcagagcatcctgaccaggcacaagccatcctttcacggcttgcagagatc
aatgatgtgtgggaagaaatgaagaccaccctgaagaaccgggaagagtctctgggagag
gccagcaagctgcagcagttcctgagagatctggatgacttccagtcctggctctccaga
acacagactgcaattgcctctgaagatatgcccaacaccctgacagaggctgagaagctg
ctcactcagcacgagaatatcaagaatgaaatcaacaactatgaggaagattatcagaag
atgagggacatgggtgagatggtgacacaagggcaaactgacgctcagtacatgttccta
cgccagcgcctacaggctttggacactggatggaatgagcttcacaaaatgtgggagaac
aggcaaaatctcctttcccagtctcatgcctaccagctgtttctcagagataccaagcaa
gcagaagctttccttaataaccaggagtatgttctggcacacacagagatgccgactacc
ttggaaggagcagaagctgctattaaaaagcaggaggatttcatgaccaccatggatgcc
aatgaagaaaagatcaatgcagttgtggagacaggcaggaggctcgttagtgatgggaac
attaactctgataaaatccaggagaaagtggactctattgatgacagacataggaagaac
cgtgaagcagccagtgaacttctgatgagactgaaagataacagggatctccaaaagttt
cttcaggattgccaagagctctccctctggatcaatgagaagatgctcacagcccaagat
atgtcctatgatgaggcgaggaacctgcacagcaagtggctgaagcatcaggcattcatg
gcagagcttgcatccaacaaagagtggctggagaagattgaaaaagagggaatgcagctc
attgcagagaaaccagagactgaggccgtggtgaaggagaagctgacaggtctccaccaa
atgtgggatgagcttgaatccaccacccagaccaaggctcagcgtctctttgatgcaaac
aaggcagagctttttacccagagctgtgcagacctggataagtggctgaatggtttggag
agccaaatccagtcggatgactacggaaaagatctcaccagtgtcaacatcctgttgaag
aagcagcagatgctggagaatcaaatggatgtccgtaagaaggagatagaggagctgcaa
agccaggcaagggctttgagccaagagggcaagagcacagatgaagtggatggcaaacgc
cttactgtggaaaagaaattcttggagctgctggagcctttgaatgagagaaaggccaac
ctgctggcctccaaagagatccaccagttcaaccgggatgtggaagatgaaattttgtgg
gttggagagaggatgcccatagctacatctactgatcatggacacaacctccagactgtg
cagctactaataaagaaaaatcagacccttcagaaagaaatccagggccaccagcctcgt
atcgatgacattttcgagaggagtcagaacataatcacagagagcagccccaatgctgaa
gtcattcagcagagacttgcagacttgaagcagctgtggaacctcctcatcgaggagaca
gagaagcgccacaagcgcctggaggagtctcacagggctcagcagtattacttcgatgca
gccgaggctgaggcctggatgagtgagcaggagctctacatgatgtcagaagagaaggcc
aaggatgaacagagtgcagtgtccatgctgaagaaacaccagattttggagcaagctgta
gaagactatgctgaaactgtgcaccagctttcaaagaccagcagaactttggtggcagat
aatcacccagaaagcgagcgcatcagcatgcgccagtccaaggtggacaagctctatgcg
ggcctgaaggacctcgctgaggagaggaggggcaagctggacgagaggcaccggctgttc
cagctcaaccgcgaggtggatgacctggagcagtggatcgcagagagggaggtggtggcg
gggtcccacgagctgggccaggactacgaacacgtcacgatgctgcaggagcgcttccgg
gagtttgcccgggacaccgggaacatcgggcaggagcgggtggataccgtcaaccacatg
gccgatgaactcatcaactccggccactcggacgctgccaccatcgccgagtggaaggac
ggactcaatgaggcctgggcggatctcctggagctcattgacacgagaacacaaatcctt
gcagcctcttatgaactgcacaaattttaccacgatgccaaggagatcttaggacgtatc
caagacaaacataagaaactgcccgaggagctcggtagagaccaaaacacagtggaaaca
ctacagagaatgcacacgacgtttgagcacgatatccaggccctgggcacccaggtgcga
cagctgcaggaggatgcagcgcgcctccaggctgcctacgctggggacaaggctgacgac
atccagaagagggaaaacgaggttctagaggcgtggaaggcactgctggatgcctgtgag
ggccgcagggtgaggctggtggacacaggagacaaattccgcttcttcagcatggttcgg
gatctcatgctctggatggaagacgttatccggcagatagaagcccaggaaaagccaagg
gatgtttcatctgtggaactcctcatgaacaatcaccaggggatcaaagcagaaattgat
gcccgaaatgacagcttcactacgtgcattgagcttggcaagtctctgctggccaggaaa
cactatgcatctgaggagatcaaggaaaagctcctgcagttgacggaaaagagaaaagaa
atgattgacaaatgggaagacagatgggagtggctgagactgattttggaggtgcaccag
ttctccagagatgcaagtgtggctgaggcctggctgctgggacaggagccctacctgtcc
agccgtgaaatagggcagagcgttgatgaggtggaaaaattaatcaagcggcatgaagcg
tttgagaaatccgcagctacctgggacgagaggtttgcagcgctggagagactgaccacg
ctggaactgctggaagtgcgtcggcagcaagaggaggaggagcggaagaggcagccgccc
actccagagcccaaggttgcagaggatggagactcccagcagcaatgggatgggacaaaa
ggagaacaagtttcccaaaacggtttgccctcagaccaggaatctccacgggtggcagaa
actgcagaaaccaacgaaatggtcaatggggctgcagaacagaggacgagttccaaagag
tccagtcccgttccttccccgacgtcagaccgcaaagccaagggcggcgttcaggcgcag
actgctgctaccctcccagccaaaacccaggagatcccctcagcccagatggagggcttc
ttacaccgcaagcacgagtgggagacacacagcaagaaagcctccagcaggtcatggcat
aacgtgtactgtgtcataaacaaccaagagatgggcttctacaaggactcgaaagctgct
gcttctggcatcccttaccacaacgagatccctgtcagcttgaaggacgcagtctgcgaa
gtagcggtcgattacaaaaagaagaagcatgtgttcaagctcagattgaccgatggcaac
gaatacctcttccaagccaaagacgatgaggagatgaacacgtggattcaggccatcaca
tcagcgatttcttcggacaaaatcgaagtgtccccgaccacccagagcactccagcctcc
agccgtgcccagaccctgcctgccagcgtcacaataaccagcgagtccagccctggcaag
cgggagaaagacaaagagaaagacaaagagaaaagattcagcctttttggtaaaaagaag
tga
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integrated database retrieval system
