Parus major (Great Tit): 107201879 Help Entry 107201879         CDS       T04864                                  Symbol CCDC88A Name (RefSeq) girdin isoform X1   KO K25392   girdin Organism pmaj  Parus major (Great Tit) Brite KEGG Orthology (KO) [BR:pmaj00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:pmaj03037]     107201879 (CCDC88A) Cilium and associated proteins [BR:pmaj03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    107201879 (CCDC88A) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HOOK_N HOOK APG6_N Motif Other DBs NCBI-GeneID:  107201879 NCBI-ProteinID:  XP_015477334 Ensembl:  ENSPMJG00000014422 LinkDB All DBs Position 3:complement(1616390..1683500) Genome browser AA seq 2078 aa AA seqDB search MENEIFTPLLEQFMSSPLVTWVKTFGPLAGGNGTNLEEYVALVDGVYLNEVMLQINPKSA NQRINKKVNNDASLRIQNLSILVKQIKTYYQETLQQLIMMSLPNVLIIGKNPFSEPGTEE VKKLLLLLLGCAVQCQKKEEFIERIQSLDFDTRAAVAAHIQEVTHNQENVFDLQWMDVIV LTQEYVEPLLKNMALHLKRLIDERDEHSETIIELSEERDCLRFLPHASAAQSPCGSPGMK RTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMESELKRLQQENMNLLSD ARSARVYRDELDALREKAIRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETKT MLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQKQ SMDESLHLGWELEQINRTTELSEVPQKSLGHEVNELTSSRLLKLEMENQSLLKTVEELQS AVGSVEGSSSRILKMEKENQRLSKKLEELENEISQEKQSLQNSQNQSKDLMKEKAQLEKT LETLRENSERQIKLLEQENEHLNQTVASLRQRSQISAEARMKEIEKENKILHESIKETSS KLNKMEFEKKQVRKELEHYKEKGERAEELENELHRLEKENELLQKKITNLKITCEKIEAL EQENSDLETENRKLKKTLDSLKNLTFQLESLEKENSQLDEENLELRRTIESLKCTSIKVA QLQLENKELESEKEQLKKSLELMKASFKKTERLEVSYQGLDTENQRLQKALENSNKKIQQ LESELQDLETENQTLQKNLEELKISSKRLEQLEKENKLLEQETSQLEKDKKQLEKENKRL RQQAEIKDSTLEENNVKISNLERENKSLFKEIVVYKESCLRLKELEKENKELVKRATIDK KTLVTLREDLVNEKLKTQQMNNDLEKLAHELEKIGLNKERLLHDEQSSDDSRYKLLESKL ESTLKKSLEIKEEKIAALEARLEESTNLNQQLRQELKTVKKNYEALKQRQEEERMVQNSP PRSGEENQSVNKWEKENQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNN NLQAQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSALEN ENEAVLKEREDLKGLYEALLKDHERLEQLHERQAAEYESLIAKHGSLKSAHKNLEVEHKD LEDRYNQLLKQKVQLEELEKVLKTEQDKMLQQSEKHETVAAEYKKLRDENERLTHTYNQL LRENEVLQTDHKNLKTLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLK GNLEEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKI MDQYKFYEPSPPRRRGNWITLKMRKLIKSKKDGNRERLKSVTLTPTRSESSEGFLQLPHQ DSQDSSSVGSNSLEDGQTLGTKKSSMGALKRLPFLRNRPKEKDKMKAFYRRSMSMNDLVQ SMVLAGGQWTGSSEHLEGPDDISTGKRRKELGAMAFSTTAINFATVNSSTGFRSKQLLNN KDTTSFEDVSPQGISDDSSTGSRVHGVQDFICADALAPPVRGIPALCRVPCQICLPFSKV SSWTAWKFLRFLISSRPASLDSGRTSTSNSNNNASLHEVKAGAVNSQSRPQSHSSGEFSL LHEHEAWSSSSSSPIQYLKGHTRSSPVLQHRTPEAPESRGKHTKTGSPGSEVVTLQQFLE ESNKSNSSEMKSASEENLLDEVMRSLSESAELAGREKLRKQPAAGCGIVRSLSVRNTVDF SDGRSLKPEQLVRPSLRKNEDLYFSSSPIKFTPGAQGKARSVKEKIQATVTQRQSRDCNP YATLPRASSVISTAEGSTRRTSIHDFLSKDSRPPVSVDTAPADRSAPPGSSEYSALRVSS ACVGCVPGRGERGPSPTPRHLGADSELPKPSRTERPGCRERTLPSSGVFWDKAGGAGNGS AGSFAAPQPFLSLNTELVSNISGLPPRSTSKAADQANVSAFRAVLRSQDQPCAAPKAQGD PRAALSRDPVPAPGPGEAQSPLLVSEDNQTLWYEYGCV NT seq 6237 nt NT seq  +upstreamnt  +downstreamnt atggagaacgagatcttcacaccccttctggagcagttcatgtcgagccctcttgtcacc tgggtgaagacattcggacctctggctggaggaaatgggaccaacctggaggaatatgtg gcgctggtggatggagtgtatctgaacgaagtcatgctgcaaatcaatccaaagtctgct aatcagaggataaacaaaaaagtaaacaatgatgcatcattaaggattcaaaatttgtcc attttggtgaaacaaattaaaacttactatcaggagactttgcagcagttgatcatgatg tctttgccaaatgtgctaataattggcaaaaatcctttttctgagccaggtactgaagaa gtaaaaaagcttctcctccttttgcttggttgtgcagttcagtgtcagaaaaaagaagaa tttattgaaagaatccaaagtctggattttgataccagagcagctgttgcagcccatatt caggaggtaactcataatcaggaaaatgtgtttgacctgcagtggatggatgtcattgtg ctgacacaagagtatgttgagcctctcctgaaaaatatggcattgcatttaaaaagactt atagatgaaagagatgagcactcagagaccatcattgagctgtcagaggagcgggactgt ctccgtttcctgccgcacgcgtcggcggcgcagtccccgtgcggctcccccggcatgaag cgcaccgagagccggcagcacctgagcgtggagctcgccgacgccaaggccaagatcagg aggcttcggcaggagcttgaggaaaagactgagcagctgcttgactgtaaacaagaactg gaacagatggaatctgaactgaagagacttcagcaagagaacatgaacctgctgtcagac gcccgctccgccagggtgtaccgggacgagctggacgcgctccgggaaaaggcgatccgc gtggacaagctggagagcgaagtcagccgctacaaagagaggctccatgacattgagttc tacaaagccagggtggaggagttaaaggaagacaatcaagtgttgctggaaaccaagaca atgttggaagatcagttagagggaacccgagcccgttcagacaaactgcacgagctagaa aaagagaatttacaactaaaagctaaactgcatgatatggagatggagcgtgatatggac cgaaagaaaattgaggagctcatggaggaaaatatgaccctagaaatggctcagaaacaa agtatggatgagtctctgcatcttggctgggagctggagcagataaacaggactactgaa ctttctgaagtgccccagaaatccctgggccatgaggtgaatgagctgacatccagcagg ttactgaagctggaaatggaaaaccaaagtttgctgaagacagtggaagagctgcaaagt gcagtgggctctgtggaaggcagcagttcaaggattctgaaaatggaaaaagaaaaccaa agacttagcaagaagcttgaagagctggagaatgaaattagccaagagaaacaaagtctt cagaacagtcaaaatcagagtaaagatttgatgaaagaaaaagcacagcttgaaaagaca cttgaaacacttcgagagaactccgagcgacaaattaaactcttagaacaagaaaatgaa cacttgaatcaaactgtggcttctctaaggcagcgctcacaaatcagtgctgaggcaaga atgaaagaaattgagaaggaaaataaaatcctccatgagtctatcaaagagaccagcagt aagttaaataagatggaatttgaaaaaaagcaagtcaggaaagaactggaacactacaaa gagaaaggggagagggcagaagaattagagaacgagctgcatcgtctggagaaggaaaat gagttattgcagaagaaaatcaccaacctaaaaatcacttgtgagaagatcgaggccttg gaacaagagaactctgacctggagacggagaacagaaagctgaaaaaaaccttggatagc ctgaaaaacctcacttttcaattagaatccttagaaaaggagaattcccaactcgacgaa gaaaatttagagttacggaggacaattgagtccttgaagtgtacaagcattaaagtggca cagttacaattagaaaataaggagctggagagtgaaaaggagcagctcaaaaaaagcctt gagctgatgaaagcctcttttaagaagactgaacgcttggaagtcagttaccaaggcctg gacacggaaaaccaaaggcttcagaaagccctggaaaacagcaataagaagattcagcaa ttagaaagtgaattacaagatttagagactgaaaatcagaccctgcaaaagaacttggaa gagttaaaaatctctagtaagcgcctggagcagttggaaaaggagaacaagttgttagaa caagagacttctcaactggaaaaggataagaaacagctggaaaaggaaaataaaaggctt cgacagcaagcagaaattaaagatagtaccttagaagaaaataatgtcaaaatcagtaat ctggaaagggaaaacaaatctttatttaaagaaattgttgtatataaagagtcgtgtctg cgcctgaaagagctggaaaaggaaaacaaagaactggtgaaaagagctaccattgataag aaaaccctggtcactttgagagaggacttggtgaatgagaaattgaagacccaacagatg aacaatgatctagagaaactggcccacgagcttgaaaaaattggcttgaacaaggagcgt ctcctgcacgatgagcagagcagtgatgacagtaggtacaagcttttggagtccaaatta gaatccacgctcaagaagtctttggaaataaaagaagaaaaaattgctgctttggaggct cgtttggaagaatcaacaaatctaaaccagcagctgcgtcaggaactgaaaacagtaaag aagaactatgaagctctcaagcaaaggcaagaagaggaaaggatggttcagaattctcct ccaagaagtggagaagaaaatcagtctgtcaataagtgggagaaagaaaatcaggagact actagagaattattgaaagttaaagatcgattaatcgaggtggagaggaataacgcgacg ctgcaggcggagaagcaggcgctgaaaacgcagctcaagcagctggagacacagaacaac aacctgcaggcccagatcctggccctgcagagacagactgtgtccctgcaggagcagaac acgactctgcaaactcagaatgccaagctgcaggtggagaactccacgctcaactcccag agcacgtccctgatgaaccagaacgcgcagctgctgatccagcagtcggccctggagaac gagaacgaggcggtgctgaaggagcgcgaggacctgaaggggctctacgaggccctgctc aaggaccacgagcgcctggagcagctgcacgagcgccaggccgccgagtacgagtcgctc atcgccaagcacggcagcctcaagtccgcgcacaaaaacctggaggtggagcacaaggac ttggaggacaggtacaatcagttgctgaaacagaaagtgcagctggaagaactggagaag gttctcaagacagagcaggacaaaatgctgcagcaaagtgagaaacatgaaactgtggca gcagaatataaaaaacttcgggatgaaaatgaaaggctcactcacacatacaatcagctc ctgagggagaatgaagtgctccaaactgaccacaagaatctgaaaacattattgaacaat tccaaactggaacaaacacggttggaagctgagttttccaaactcaaagaacagtaccag caattggatatcacatcaacaaagctaaataatcagtgtgagctgctcagccaacttaaa ggaaacctggaggaggagaacagacacctgctggatcaaatccagaccttaatgctgcag aacaggacattactggagcagaacatggaaagcaaggatctctttcacgtagagcaaagg cagtacattgacaaactgaatgaactgaggcggcagaaggagaaactggaggagaagata atggatcagtataaattttatgagccatctccaccaagaagaaggggcaactggatcacc ctgaagatgaggaagctgatcaagtccaagaaggacgggaaccgcgagcgcctgaagtcg gtgacgctgacgcccacgcgctccgagtccagtgagggattcctgcagctgccccaccag gacagccaggacagctcctccgtgggctccaactccctggaggatgggcagaccctgggc accaaaaagagtagtatgggtgcactgaaaagactgccctttttgaggaacagaccgaag gaaaaagacaaaatgaaggccttctaccgtcgctccatgtccatgaatgacctggtgcag tccatggtcctggcaggaggacaatggacaggtagttctgagcatctggagggtcctgat gatatatccacgggtaaaaggaggaaggaattgggagctatggccttctctactacagcc atcaactttgccactgtcaactcctccacaggcttcagatccaagcagttgctaaataat aaagatactacatcctttgaagatgtaagtccacaaggtattagtgatgattctagtaca ggatcaagagttcatggagtacaggactttatctgtgcagatgctcttgctcctcctgtc cgtggcattccagccctgtgcagggttccctgtcagatctgtttgcccttttccaaagtg tcctcttggaccgcctggaaattccttcgctttctgatctcttccagaccagccagcctt gatagtggcaggacatccactagcaatagcaataacaatgcttcactccatgaagtcaaa gcaggtgcagtgaacagccagagcaggccccagagccacagcagtggggagttcagcctg ctccacgagcacgaggcctggtccagcagcagcagcagccccatccagtacctgaaggga cacaccaggtccagccccgtgctccagcacaggacgcccgaggcgccggagagtcgcggc aaacacaccaaaacgggctcccctggcagtgaagttgtcaccctgcagcagttcctggag gagagcaacaagagtaactccagtgagatgaaatctgcaagcgaagagaaccttttagat gaagtgatgagaagcttgtcggagtctgcggagctggcagggagggagaagctccgaaag cagccggcggctggctgtggcatcgtgagatccctgagtgtcaggaacacggttgatttc tcagatggacgatccctcaaaccagaacagctggtaaggcccagcctccggaagaacgaa gatctctacttcagtagctctccaatcaaattcacccccggcgcccagggcaaggcccgg tccgtgaaagagaagatccaagcgactgtgacccagcgacaatccagggactgcaacccc tacgccaccttacctcgtgccagcagcgtcatttccacggcagaaggaagcacccgaagg acaagcatccatgattttttgtctaaggacagtaggccgcccgtgtccgtggatacagcc ccggccgacaggagcgctccgcccggctccagtgagtactcggcactgcgggtgtcctct gcttgtgttggctgtgtgcctggcaggggggagcgcggcccctcgcccaccccgcgccat ttaggagctgactccgagctgcccaagccttccaggacggaaaggccaggttgtcgtgag aggactttgccgagctcgggtgtgttctgggataaagccggcggagctgggaatggcagc gcgggctccttcgctgcgccccagccgtttttatccctcaacaccgagttagtcagcaat atcagtggattgcccccgagatccacctccaaagcagctgatcaggcaaacgtgtcggcg tttagggcggtgctgaggagccaggaccagccttgtgctgctccaaaggctcagggtgac ccgcgggcagctctgagcagggaccctgtccctgcccccggccccggcgaggcgcagtcc ccgctgctggtctcggaagataaccagaccctgtggtatgagtatggctgtgtatga

DBGET integrated database retrieval system