Parus major (Great Tit): 107201968
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Entry
107201968 CDS
T04864
Symbol
SMC6
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmaj03400
]
107201968 (SMC6)
DNA repair and recombination proteins [BR:
pmaj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
107201968 (SMC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
FtsK_SpoIIIE
AAA_21
NPV_P10
Laminin_II
Motif
Other DBs
NCBI-GeneID:
107201968
NCBI-ProteinID:
XP_015477543
Ensembl:
ENSPMJG00000012478
LinkDB
All DBs
Position
3:complement(102118529..102157479)
Genome browser
AA seq
1083 aa
AA seq
DB search
MGKRKEESVPNPGSQKRQRKEYTDIHTDDGSASSQLPDGEVGIIESIQLKNFMCHSNLGP
FQFGSNLNFVVGTNGSGKSSVLTALIVGLGGKATATNRGSSLKMFIQKGETSADISITLR
NQGRDAFKPELYGTSITVNQHINQDGSRTCKLRSKSGSIISSKKEELIGILDHFNIQVDN
PVSVLTQEMSKQFLQTKNEGDKYKFFMKATQLEQMKEDYSFIGKTKKNTRVQIEQGEERL
EELKKLYLEKKEIFKSIAFVNDMQSRLKDLKHQMAWAVVSEMEKEIELLKEGIRAEEGNT
EFLQKVEDCQAKVNEAEKKYKAIQDKLITVSEEAQALHPQYISLKAEVQAKRKAVNETEI
ICNRSKTELKRLEKDSTQLCKRIEELKSCANQVSEPEKLERQRRIAYLREQLKAYHDEEI
MIDQQVDQFQQAISKCREEHSRLRRERSEVQQALDAQQKQLRDLKDSKTNTLKRFGPHVP
AFLEALEVAHKQGRFRKKPLGPLGALIHPKDPELILAIESCLKSLLQAFCCDNHSDERTL
QLLMSKYYARGHRPQIIVNKFQNKIYDTSQRSVHHPEFPSVLTALEIDNPVVANCLIDMR
GIETVLLIKNNRRAREVMQCNRPPKNCKEAFTAEGDQVFERRYYSSNFVRPKFLSQDLEA
EISHLDKEIENKRAQLTTSQQRLHSIENEIRQNEDHLHGHRRHQKQLQVKVRTAKAEIAD
LENVEEHQSADIHILQEEAEENKSRMESVKQDMQLQSREMEERKNILQAAEKKLEEVKEK
IHQVEEIAAPIKAELNQAESEVENSKRHLQHYEDKQREHVACVNKHKDLLVSKGKELEEK
MAKARQIFSDRIKVSRTVKSLDAEMNRLREKINSESSHRGNREEIIQQFHYAKERYEDAS
NKVKNLRRFIAVLDEVMTERLKVYRQFLRSLSMQCKLHFEQLLRLRGCSGHIVFDHKNET
LSITVQPREEEKAACSDLRSLSGGERSFSTVCFILSLWNISESPFRCMDEFDVYMDMLNR
RIAIDMILERADFQRHRQFILFTPLTMSSLPTSPHIRILRMPDPPRDQRTLNFQNRNDRD
EDQ
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagagaaaggaagaaagtgttccaaatcctgggtcccagaaaagacagagaaaa
gaatacacagatatacatactgatgatggtagtgcctcttcacagttgcctgatggtgaa
gttggcataattgaaagtatccagctgaagaacttcatgtgccattcaaatctggggcct
tttcagtttggatcaaatctcaatttcgtcgttggaaccaatggcagtggaaaaagttca
gttttaacagcactaattgttggacttggtggaaaagccactgcaactaacagaggttcc
tcattaaaaatgtttattcaaaaaggagagacttctgcagatatttccataactttgcga
aaccagggaagagatgcatttaagccagaactgtatggtacctctattactgtgaatcag
cacattaatcaggatggaagcagaacttgcaaactgagaagcaaatctgggagcataatt
tcttcaaagaaagaggaactcataggaatactggatcactttaatatacaggtagataat
cctgtgtctgttttaacccaagagatgagcaaacagtttttacagactaaaaatgaaggt
gacaagtacaagttttttatgaaggcaactcagctggaacaaatgaaagaagattattca
tttattgggaaaactaaaaaaaatacccgtgttcagatagaacaaggggaagagcgtctt
gaagaacttaagaagctttatttggaaaagaaggaaattttcaaaagcattgcatttgtg
aatgacatgcaaagtcgtctcaaagatttgaaacatcaaatggcgtgggcagtggtgagt
gagatggaaaaagaaatagagctgctcaaagaaggcatcagagctgaagaaggaaataca
gagttccttcagaaggtagaagactgccaggcaaaagtgaatgaagcagaaaaaaagtac
aaagcaatacaagacaaattgataacagtaagtgaagaagcacaagcccttcatcctcag
tatatttctttgaaggctgaagtgcaggcaaaaagaaaagcagtcaatgaaactgagatc
atttgtaatcgttccaaaacagagttaaaacgtctggaaaaagacagtacacagctatgt
aaacgaattgaagaactgaaaagctgtgccaatcaggtttcagagcctgagaaattggaa
agacaaaggagaattgcatacctaagggaacagttaaaggcataccatgatgaagaaata
atgattgatcagcaggtggatcagtttcagcaggctatatctaagtgtagggaagaacat
tctagactcaggagagaaagaagtgaagtgcaacaagcactggatgcccagcagaaacag
ttgagagacctgaaagatagtaaaacaaacactttgaaaagatttggaccacatgtacca
gcatttcttgaagcacttgaagtagcccataaacaaggacgctttagaaagaaacctctt
ggacctttaggtgctttgattcatccaaaagatcctgaactgatcttggctatcgaatcc
tgtttaaaaagcctacttcaggcgttttgctgtgataatcatagcgatgaaagaactctt
cagttactgatgtcaaaatattatgcacgtggacatagacctcaaataattgtaaataaa
tttcagaataaaatttatgatactagtcagagatctgttcaccatccagaattcccgtca
gttctgacagcattggaaatagataatccagtggttgccaattgcttgatcgatatgagg
ggtatagaaacagtcctgctgattaaaaataaccgtagggctcgtgaagtaatgcagtgc
aatcggcccccaaaaaactgtaaagaagctttcactgctgaaggtgatcaggtgtttgaa
cgacggtattactcttccaattttgtcagacccaagttcctaagtcaagatcttgaagca
gaaatcagtcatttggataaagaaattgaaaataaaagggcacagttgacaacgtctcag
caacgcttgcattccattgaaaatgagattaggcagaatgaagatcatctccatggtcat
cggagacaccaaaaacagctacaggtaaaagtacgaacagcaaaagcagagatagcagat
cttgaaaacgtggaagagcaccagtcagcggacatccatatattacaagaagaagctgaa
gaaaataagagtaggatggagagtgtaaaacaagacatgcagctacaaagcagagaaatg
gaagaacggaaaaatattctccaagcagctgaaaaaaaattagaagaagtgaaagaaaaa
attcatcaagtagaagaaattgctgccccaattaaggctgaattaaaccaggctgagtca
gaagtggagaacagtaaacgccatttgcagcactatgaagacaagcagagagaacatgtg
gcttgcgtaaataagcacaaagatttactagtttccaaaggaaaggaattagaggaaaaa
atggcaaaagcgaggcaaatcttctcagaccgcatcaaggtcagcagaactgttaaaagt
cttgatgcagaaatgaatcgcttgagagagaagataaattcagaaagcagtcaccgtgga
aacagagaagaaataatccagcaatttcattatgcaaaggaaagatatgaggatgcaagc
aataaagtaaagaatttaaggagatttattgctgtgctggatgaagtaatgacagaaagg
ctcaaagtgtatcggcaattcctaaggagcctttctatgcaatgcaaactccactttgag
caattattacgtcttcgaggttgctctggacatatagtttttgatcacaagaatgagaca
ctttccataacagttcagcctcgagaggaagaaaaagctgcctgtagtgatctgagatct
ttatcaggaggtgaacgttccttctccacagtttgtttcattctttctctgtggaacatt
tctgaatctcctttcagatgcatggatgaatttgatgtctacatggatatgcttaacaga
agaattgccatcgatatgattctggagagagctgactttcagcgacatcgacagttcatt
ttgttcacccccctgaccatgagttctctgcctacgagtccccatattcgaatcctacgc
atgccagaccctccaagagaccaaagaacactgaattttcaaaataggaatgacagagat
gaagatcaataa
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