Parus major (Great Tit): 107201974
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Entry
107201974 CDS
T04864
Symbol
APP
Name
(RefSeq) amyloid-beta precursor protein isoform X1
KO
K04520
amyloid beta A4 protein
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmaj01002
]
107201974 (APP)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pmaj00535
]
107201974 (APP)
00536 Glycosaminoglycan binding proteins [BR:
pmaj00536
]
107201974 (APP)
Peptidases and inhibitors [BR:
pmaj01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
107201974 (APP)
Proteoglycans [BR:
pmaj00535
]
Cell surface proteoglycans
Others
107201974 (APP)
Glycosaminoglycan binding proteins [BR:
pmaj00536
]
Heparan sulfate / Heparin
Others
107201974 (APP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Gluconate_2-dh3
Prominin
Motif
Other DBs
NCBI-GeneID:
107201974
NCBI-ProteinID:
XP_015477564
Ensembl:
ENSPMJG00000012072
LinkDB
All DBs
Position
1:complement(101075874..101303397)
Genome browser
AA seq
752 aa
AA seq
DB search
MLPHLAVLLLATGAARALEVPADGNAGLLAEPQIAMFCGKLNMHMNVQNGKWESDPSGTK
TCIGTKEGILQYCQEVYPELQITNVVEANQPVTVQNWCKRGWKQCNGHPHIVVPYRCLVG
EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKESCSEKSMNLHDYGMLLPCGIDKFR
GVEFVCCPLAEESDNLDSADAEDDDSDVWWGGADADYADGSDDKAVEEQAEEDEELTVEE
DEDADDDDDDDDGDEIEEAGEEYEEATERTTIIATTTTTTTESVEEVVREVCSEQAETGP
CRAMISRWYFDVAEGKCAPFFYGGCGGNQNNFDSEEYCMAVCGSIIPTTAASTPDAVDKY
LETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEK
VESLEQEAANERQQLVETHMARVEAMLNDRRRIALENYITALQTVPPRPRHVFNMLKKYV
RAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSFLYNVPAVAEEI
QDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVDGDFSLDDL
QPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTNVKTEEISEVKMDAEFRHD
SGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEV
DAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgctgccccacttagccgtactgctgcttgccaccggcgccgcccgggctctcgaggtg
cctgctgatggaaatgcagggctgctggcagagcctcagattgccatgttctgtggaaaa
ctcaacatgcatatgaatgtgcagaacggaaagtgggaatcggacccctctggcaccaag
acctgtattgggacgaaagaagggattcttcagtactgtcaggaagtgtaccctgaattg
caaatcaccaacgttgttgaagccaaccagcctgttacagtacagaactggtgcaagagg
ggatggaagcagtgcaatggtcacccgcatattgtggttccctatagatgtctggtgggt
gaatttgtgagtgatgcccttctggtgccagacaagtgcaagttccttcaccaggaaaga
atggatgtgtgtgaaactcacctgcattggcatactgttgctaaagagtcctgtagtgag
aagagcatgaatctgcatgactatggcatgctgttgccctgtggaatcgacaagtttcgt
ggtgtggagtttgtctgctgcccactggcagaggaaagcgacaatcttgattcagctgat
gctgaagatgatgattcagatgtctggtggggaggtgcagatgcagactacgcagatgga
agtgatgataaggcagtagaagaacaagcagaggaagatgaggagctaactgttgaggaa
gacgaagatgcagatgatgacgatgatgatgatgatggtgatgaaattgaagaggcagga
gaagagtatgaggaggcaactgaaagaactaccattattgcaactactaccaccaccact
acggagtctgtggaagaggttgtcagagaggtgtgctctgagcaagctgagactgggccg
tgccgcgcgatgatctcccgctggtactttgacgtggctgaaggaaagtgtgcacccttc
ttttacggtggctgtggcgggaaccagaacaactttgactcggaggagtactgcatggcg
gtctgtggcagcatcatccctaccacagctgctagcactcctgatgctgttgacaaatat
ttggagacacctggagatgagaatgaacatgcccacttccagaaagccaaggaaaggctt
gaagctaagcatcgtgaaagaatgtctcaggtcatgagagagtgggaagaggcagaacgt
caagcaaagaacttgccaaaggccgacaagaaagctgttatccagcatttccaggagaaa
gtggaatcactggaacaagaagcagcaaatgaaagacagcagcttgtggagactcacatg
gcacgagtggaagccatgctgaatgaccgtcgacgcattgctctggagaactacatcaca
gccctgcaaactgtcccacccaggcctcgtcacgtgttcaacatgctgaagaagtatgtg
cgtgctgagcagaaagacagacagcacacgctcaaacactttgaacacgtccgcatggta
gatccaaagaaagctgcccaaatcagatctcaggttatgacacatctacgtgtgatatat
gaacgcatgaaccagtctctctccttcctctacaatgtgcctgctgtggcagaggagatc
caggatgaagttgatgaattacttcagaaagagcaaaactactctgatgatgttttggcc
aatatgatcagtgaacccagaatcagctatggaaatgatgctcttatgccttcactgact
gaaacaaagactacagttgaacttcttccagtggatggagacttcagcctagatgacctt
cagccatggcatccctttggagttgattctgttccagccaatactgaaaatgaagttgag
cccgttgatgcccgcccagctgcagacagaggactcaccacacgaccaggttccgggttg
accaatgttaagacagaagagatatctgaggtgaagatggatgcggagttccggcatgac
tcaggatatgaagttcatcatcaaaagctggtgttctttgctgaagatgtgggttcaaat
aaaggtgccatcattggactaatggtgggaggtgttgtcatagcaacagtgattgtcatt
actttggtgatgctgaagaagaagcagtatacgtctattcatcatggagttgtggaggtg
gatgctgcagtgacaccagaggagcgccacctttccaagatgcagcaaaatggctatgaa
aatcccacatacaagttctttgaacagatgcagaactag
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