Parus major (Great Tit): 107202114
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Entry
107202114 CDS
T04864
Symbol
SYNCRIP
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein Q isoform X5
KO
K13160
heterogeneous nuclear ribonucleoprotein Q
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmaj03041
]
107202114 (SYNCRIP)
Spliceosome [BR:
pmaj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
107202114 (SYNCRIP)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
hnRNP_Q_AcD
RRM_7
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
107202114
NCBI-ProteinID:
XP_015477914
Ensembl:
ENSPMJG00000002908
LinkDB
All DBs
Position
3:78471471..78498233
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AA seq
605 aa
AA seq
DB search
MATEHVNGNGTEEPMDTSAAVTHSEHFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
AIEALKEFNEEGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
EAKIKALLERTGYTLDVTTGQRKYGGPPPESVYSGQQPSVGTEIFVGKIPRDLFEDELVP
LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
ANNRLFVGSIPKSKTKEQIVEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
QARRRLMSGKVKVWGNVVTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYAQRGGPGSARGVRGARG
GAQQQRGRGVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQQPLQAGKR
GRGRS
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggctactgaacatgttaatgggaacggtactgaagagcccatggatacttctgctgca
gttacccattctgagcatttccagacattgcttgatgctggtttaccacagaaagttgct
gaaaaactagatgaaatttacgttgcagggctagttgcacatagtgatctagatgaaaga
gctattgaagctttaaaggaattcaatgaagaaggtgcactagcagtgcttcagcagttt
aaagacagtgatctctcacatgttcagaacaaaagtgcctttttatgtggagtcatgaag
acatacaggcagagggaaaaacaggggaccaaggtggcagattctagcaaaggaccagat
gaggcaaaaattaaggcactgttggagagaactggctacactcttgatgtgactactgga
cagaggaaatatggtggacctcctccagagtcagtatattcaggacaacagccttctgtt
ggtacagagatatttgtgggcaagattccgagagacttgtttgaagatgaacttgttcca
ttatttgagaaagctggacctatatgggatctccgcttaatgatggatccactaactggt
ctaaacagaggatatgcttttgtcactttttgtactaaagaggcagctcaggaagctgtt
aaactgtacaacaaccacgaaattcgttctggaaaacacattggcgtatgcatctctgtt
gccaataataggctttttgttggctctattcctaagagtaaaaccaaggagcaaattgtt
gaagaattcagcaaagtaacagagggtcttacagatgtcatattgtatcatcagcccgat
gacaagaaaaagaatcggggtttctgctttcttgaatatgaagatcacaaaactgctgct
caggccagacgtaggttaatgagtggcaaagtgaaagtctggggaaatgttgtcacagtg
gaatgggctgaccctatagaagacccagatcctgaagtcatggcaaaggtaaaagttttg
tttgtacgcaatcttgccaataccgtaacagaggagattctagaaaaagccttcagtcaa
tttggaaagctagaacgagtgaagaagctaaaagactatgctttcattcattttgatgaa
cgggatggtgctgtaaaggcgatggaagaaatgaatggcaaagatttagagggagaaaac
attgaaattgtttttgctaagccaccagatcaaaaaagaaaagaacggaaagctcagaga
caagcggctaaaaatcagatgtatgatgattactactattatggtccacctcatatgccc
cctccaacaagaggtcgaggccgaggaggtagaggtggttatggatatccccctgactat
tacggatatgaagattattacgattattatggctatgactaccataactatcgtggtgga
tatgaagatccttactatggttatgaagattttcaagttggagctagaggaaggggtggt
agaggagcaaggggtgctgctccatccagaggtcgcggggctgctcctccccgtggcaga
gccggttatgcacagagaggtggtcctggatcagcaagaggcgttcgtggtgcgagagga
ggtgcccagcaacaaagaggccgcggggtacgtggtgcgaggggtggccgcggtggaaat
gtaggaggaaagcgcaaagctgatgggtacaaccagccagattccaagcggcgccagacc
aataatcagaactggggctcccaacccattgctcagcaaccgctccaagcagggaaaagg
ggtcgaggccggtcctga
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