Parus major (Great Tit): 107202298
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Entry
107202298 CDS
T04864
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107202298 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmaj03021
]
107202298 (TAF5L)
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107202298 (TAF5L)
Transcription machinery [BR:
pmaj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107202298 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
107202298 (TAF5L)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
107202298 (TAF5L)
STAGA complex
107202298 (TAF5L)
TFTC complex
107202298 (TAF5L)
SAGA complex
107202298 (TAF5L)
SLIK complex
107202298 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
ANAPC4_WD40
NBCH_WD40
RMC1_N
PROPPIN
Nup160
Ge1_WD40
eIF2A
Nbas_N
Motif
Other DBs
NCBI-GeneID:
107202298
NCBI-ProteinID:
XP_015478352
Ensembl:
ENSPMJG00000002929
LinkDB
All DBs
Position
3:42009002..42028357
Genome browser
AA seq
589 aa
AA seq
DB search
MKRIRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLCQTAEEMAANLTVQSESGCANVVSA
APCLAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDIIEQLQTTMTIQDILSNLKLRAFLDNKYVIRLQEDSYNYLLRYLQ
SDNNNALCKVLTLHIHLDVQPAKRTDYQLYAGGSSSRNESNGLEPSDVPASILQNEAALD
LLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRSR
KLKSEPHLVDVSRIRLACDILDEEEEEDDHAGTEMKILRGHCGPVYSTRFLSDSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPCSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCIKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCNAPADGSSSELVGVYTGQMNNVLSVQFMACNLLLVTGIAQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcatacgcacagaacagattcagatggcagtgtcctgctacctcaagcgccgt
cagtatgtggactcggaaggtcccctaaaacaagggctgaggctgtgtcagactgctgaa
gagatggcagctaatctcacagtccaatctgagtctggttgtgccaacgttgtgtctgca
gctccctgcctggcagagccacagcaatatgaagtacagtttggacgattacgcaatttt
ctgacagattcagattctcagcacagccatgaagtgatgcctcttctatatcccctcttc
gtctacctccatctgaacatggtccagaatggcctaaaaagcacagtggacagtttttac
agccgcttccatggcatgttcttgcagaatgccagccagaaggatatcattgaacagttg
cagactaccatgactattcaagatatcctgtccaacttgaagctccgggcttttctggac
aacaaatacgtcatccgccttcaagaggacagctacaactaccttcttcgctacctccaa
agtgacaacaacaacgccctgtgcaaagtcctgaccttgcacattcacctggatgtgcag
cctgccaagaggactgactaccagctctatgctggtgggagctcctcacgcaacgagagc
aacggcctggaacccagcgacgtgccagcttccattctgcagaatgaggcagcgctggat
ttactgcaggacagcattaaacgtgtcaaggacgggcccccttccttaaccaccatctgt
ttctatgccttctataacacggagcagttgctgaacactgcagagatttcaccaaatagc
aagctgctcgctgctgggttcgataattcatgcgtgaagctttggagcctgcgctccagg
aagttgaagtctgagccccaccttgttgatgtgtcccgcatccgtttggcttgtgacatc
ctggatgaggaggaggaagaggatgaccatgcaggcacagaaatgaagatcctgcgagga
cactgtggacctgtgtatagcacaaggttcctttcagacagttcaggactcttatcttgt
tctgaggacatgtccatcagatactgggacctcggaagttttacaaacactgtgttgtac
caaggacatgcctatcccgtctgggacttggatatcagcccctgcagcctgtactttgcc
agcggttcccacgatcgcactgcaaggctctggtcgtttgatcggacgtacccgctgcga
atatacgcgggccatttggcggacgtggactgcatcaagttccaccccaattccaactac
ttagcgacgggctccacggacaaaaccgtgcgcctgtggagcactcagcagggcaactcg
gtgcggcttttcaccgggcaccggggccctgtgctggcgctcgccttttcccccaatggg
aagtacctggcatcggcaggtgaagaccagcggctgaagctgtgggacttggcatcagga
actctttacaaagaactgagggggcacacagacaacataaccagccttacttttagccct
gacagtagtttaattgcttcagcgtcgatggacaattcggttcgggtctgggacattcgg
aacacttactgcaacgcccctgcggatgggtcttccagtgaactggttggtgtatatacc
ggacagatgaataacgtactgagcgtacagtttatggcctgtaatcttcttctagtgact
ggaattgcacaagaaaatcaggaacattaa
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integrated database retrieval system
