Parus major (Great Tit): 107202300 Help Entry 107202300         CDS       T04864                                  Symbol MSH2 Name (RefSeq) DNA mismatch repair protein Msh2   KO K08735   DNA mismatch repair protein MSH2 Organism pmaj  Parus major (Great Tit) Pathway pmaj03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pmaj00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     107202300 (MSH2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pmaj03400]     107202300 (MSH2) DNA repair and recombination proteins [BR:pmaj03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      107202300 (MSH2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_IV MutS_II MutS_I AAA_27 DUF6437 Motif Other DBs NCBI-GeneID:  107202300 NCBI-ProteinID:  XP_015478361 Ensembl:  ENSPMJG00000004366 LinkDB All DBs Position 3:complement(14626420..14671073) Genome browser AA seq 936 aa AA seqDB search MAVEPPREAVWPEGAGAEAGFVRAVLSLPEKPDTTVRFFERGDYYTVHGADARLAARDLF RTRAVIRQLAGAPGTQKLESVVLSKMNFEYFVRDLLLVRHYRVEVYKNKAGSKSVKENDW YLAYKGSPGNLSQFEEVLFANNDMSTAIGVVGVKLSAADGQRVVGVGCVDTTLRKLSVCE FPDNDQFSNLEALLVQLGPKECVLPGGETAGEMGKLRQVIQRGGILITDRKKADFTTKDI VQDLNRLLKSKKEEQLNSAALPEMEKQVAVSSLSAVIKFLELLSDESNFGQFELTTFDLS QYMVLDNAAVQALNLFQSSVENANTAQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKTRIE ERLNLVEAFVMDPELRQCLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRMYQAINQLPNV VEALEKHEGAHQMLLLAVFITPLTDTCSDFSKFLEMIETTLDLEKVENHEFLVKASFDPN LTELREKMNELEEKMQSLLKTAAKELGLEAGKSIKLETNSQFGHHFRVTCKEEKALRNNS KYGIIDTQKNGVKFTNSKLSAINDEYIRNREEYEEAQDAIVKEIINIASGYAEPMQTMND VIAQLDAIVSFAHVSNAAPVPYVRPVILDKGQGRIVLKGARHPCIEVQDEVAFIPNDITF EKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEITIVDCILARVGAGDS QLKGVSTFMAEMLETASILRTATENSLIIIDELGRGTSTYDGFGLAWAISEYIASKICGF AMFATHFHELTALAEQVPTVNNLHVTALTSDDTLTMLYRVKEGVCDQSFGIHVAELAAFP KHVIESAREKALELEEFQNIGKSKESEGEPPAKKSYREREEGEKIIQDFLCQVKALPLTD MSEEDIKVKLKQLRNDVLAKKNSFVNEIISRTKVTS NT seq 2811 nt NT seq  +upstreamnt  +downstreamnt atggcggtggagccgccgcgggaggccgtgtggcccgagggcgcgggggccgaggcgggc ttcgtgcgcgccgtgctctcgctgcccgagaagcccgacaccaccgtgcgcttcttcgag cgcggcgactactacacggtgcacggcgcggacgcgcggctggccgcccgcgatctcttc cgcacccgcgccgtcatccgccagctggcgggggcaccgggaactcagaagcttgagagt gttgtgcttagtaaaatgaactttgaatattttgtgagggacctccttctggttcgtcat tacagagttgaagtttacaagaacaaagcagggagcaaatctgtcaaagaaaatgactgg tatttagcttacaagggttctccaggaaatctttcccagtttgaggaagttctctttgcc aacaatgatatgtccacagccatcggggttgtgggggttaagctgtctgctgctgatgga cagagagtagtgggagtgggctgtgtcgacactacgctgagaaaattgagtgtttgtgag ttcccagataatgatcagttctccaaccttgaagctctactggttcaactgggcccgaag gagtgtgtgctgccaggaggagagactgcaggagagatgggaaaactgagacaagtcatt cagagaggaggaatcctgattacagacaggaagaaggcagatttcacaacaaaagatatt gttcaggatctcaatcgcttgttgaaatccaaaaaagaagagcagctgaatagtgcagca ctgccagagatggaaaagcaggttgctgtttcgtctttgtcggccgttatcaagtttttg gagttgctgtcagacgagtctaattttggacaatttgaactgactacttttgatcttagt caatatatggttctagacaatgcagctgttcaagccctcaacctttttcagagttctgtg gaaaatgcaaatactgcacagtctctagctggtttactgaataaatgcagaacccctcaa ggacaaagactagttaatcagtggatcaaacaaccacttatggacaagaccagaattgaa gaaagattgaatttggttgaagcttttgtgatggatccagaactacgtcagtgccttcaa gaagatctgttacgtcgctttccagacctcaaccggctggcaaagaaatttcagagacaa gcagcaaacttacaagactgttaccgaatgtaccaggctatcaatcaactgcctaatgtt gtagaagcactagaaaaacatgaaggagctcaccagatgttgttgttggctgtatttata acacctcttactgatacctgctctgacttctcaaagtttctggagatgatagaaacaaca ttggacttggaaaaggtagaaaatcatgaatttcttgtcaaggcttcttttgatcctaat ttaacagaattaagagagaagatgaatgagctggaagaaaaaatgcagtccctactaaag actgcagcgaaagaactaggtttggaagctggcaaaagtatcaaactagagaccaattca cagtttggacatcactttagagtaacttgtaaggaggaaaaagctctccgtaataattca aaatatggaatcattgatacacagaagaatggtgtgaaatttactaacagcaaattgagt gccatcaatgatgaatatataaggaacagggaagagtatgaagaggctcaggatgcaatt gttaaggagatcattaacattgcttcaggttatgcagagcccatgcagacgatgaatgat gtgatagctcagctggatgccattgtcagctttgcccacgtgtcgaacgcagccccggtg ccctacgtccggcccgtcattctggacaagggacagggcaggatcgtgctgaaaggtgcc aggcatccctgcatcgaagtgcaggacgaggtggccttcatccccaatgacattacattt gagaagggcaagcagatgttccacattattactggccctaacatggggggaaaatccacg tacatccgacagacaggggtgattgttcttatggcccaaattgggtgttttgtgccgtgt gagtccgcagaaataaccattgtggattgtatcctggctcgggtgggagcaggagacagc cagctgaaaggagtgtctactttcatggctgaaatgctggagactgcttcaatcctcagg acagcaactgaaaactccctgataatcattgatgagctgggaagaggaacctctacctac gatggctttggcttagcatgggctatctcagaatacattgccagcaaaatctgtgggttt gccatgtttgctacacacttccatgagctcacagctcttgctgagcaggtgccaacagta aataacctccatgtcactgctctgaccagtgatgacacactgacgatgctttatcgagtc aaggaaggtgtttgtgaccagagttttggaatacatgtagcagagttggcagctttccca aaacatgtgattgaaagtgcaagagagaaggcattggagctggaggagtttcaaaatatt ggcaagtccaaggaatctgaaggagaaccaccagccaagaaatcatacagagaaagagag gaaggtgaaaagataattcaggattttctttgtcaagtgaaagcattgcccctgacagat atgtcagaggaagacatcaaagtcaagttgaaacagctgagaaatgatgtgctggcaaag aagaacagttttgtgaatgaaataatttcccgaacgaaagttacatcatga

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