Parus major (Great Tit): 107202331
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Entry
107202331 CDS
T04864
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03082
ATP-dependent chromatin remodeling
pmaj03083
Polycomb repressive complex
pmaj04110
Cell cycle
pmaj04330
Notch signaling pathway
pmaj04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107202331 (HDAC2)
03083 Polycomb repressive complex
107202331 (HDAC2)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107202331 (HDAC2)
04350 TGF-beta signaling pathway
107202331 (HDAC2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
107202331 (HDAC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107202331 (HDAC2)
Enzymes [BR:
pmaj01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107202331 (HDAC2)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
107202331 (HDAC2)
HDAC complexes
Sin3A-HDAC complex
107202331 (HDAC2)
BRAF-HDAC complex
107202331 (HDAC2)
REST complex
107202331 (HDAC2)
SHIP complex
107202331 (HDAC2)
MiDAC complex
107202331 (HDAC2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
107202331 (HDAC2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
107202331 (HDAC2)
Chromatin remodeling factors
NuRD complex
107202331 (HDAC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
107202331
NCBI-ProteinID:
XP_015478454
Ensembl:
ENSPMJG00000014173
LinkDB
All DBs
Position
3:66247304..66271270
Genome browser
AA seq
488 aa
AA seq
DB search
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKAKDSSGEKTDAKGA
KSEQLSNP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagtcagggcggcggcaagaagaaagtctgctactattacgacggtgatatt
ggaaactattactatggacaaggacatccaatgaaacctcacaggatccgaatgactcac
aacttgctgctaaactatggcttatacagaaaaatggaaatttatcgaccccacaaagca
actgccgaggaaatgaccaagtaccatagtgatgaatacatcaaatttctccgatcaata
aggcctgacaatatgtctgagtacagcaagcaaatgcagagatttaatgttggagaagat
tgtcctgtatttgatggcctatttgagttttgtcagctgtcaactggaggctctgttgct
ggggcagtaaaattgaacagacaacaaacagacatggctgtcaattgggctgggggactt
caccatgccaagaaatcggaggcatctggtttctgttatgtcaatgatattgtgcttgcc
atccttgagttactgaaatatcaccaaagagtgttgtatattgatatcgatatccatcat
ggtgacggtgttgaagaagcattttataccacagatcgtgtcatgacagtatcattccat
aagtatggtgaatattttccaggcacaggggaccttagggacattggtgctggaaaaggc
aaatactatgctgtcaactttccaatgagggatggtatagatgatgaatcatatggacag
atattcaaaccaattatatctaaagtaatggagatgtaccagcccagtgctgtggtattg
cagtgtggagcagattcactgtctggggacagactgggatgctttaatcttactgttaaa
ggtcatgctaaatgtgtggaagttgtaaagacttttaacttgccattgctgatgttagga
ggagggggctacacaattcgtaatgtggctcggtgctggacatatgaaactgctgttgcc
ttagattgtgaaattcccaatgagttgccatacaatgactactttgagtattttggacca
gacttcaagcttcacattagtccttcaaatatgactaatcagaatacaccagaatatatg
gagaagatcaagcaacgcttatttgagaacttgcgcatgttacctcacgcacctggtgta
cagatgcaggccattcctgaagatgctgttcatgaagacagtggagatgaggatggagaa
gatccagacaaacgcatttctattcgagcctctgataagcgcatagcctgtgacgaagaa
ttttcagattctgaagatgaaggggaaggtggacgacgaaatgttgcagatcataagaaa
ggagcaaagaaagccagaatagaagaagacaaaaaagagactgaggacaaaaaagcagat
gttaaggaggaggataaagccaaggacagcagtggtgaaaagacagacgccaaaggagca
aaatcagagcagctcagcaacccttga
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