Parus major (Great Tit): 107202348
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Entry
107202348 CDS
T04864
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X2
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107202348 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107202348 (PAN3)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107202348 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
107202348 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_CK
Pkinase
Motif
Other DBs
NCBI-GeneID:
107202348
NCBI-ProteinID:
XP_015478509
Ensembl:
ENSPMJG00000017474
LinkDB
All DBs
Position
1:complement(68249306..68315101)
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AA seq
761 aa
AA seq
DB search
MDGGGLADANLTDSYFSTSFIGVNGFGSPAETKYPMMQRMTNSSSSPSLLNDSAKQYAGH
DPLTSPNSSLFNDFAALSVSQRRKLAKPAFPSFISDLEDRYNTVLPRKYRLGMLDERIVP
VGSKARKSKNPIGCLADRCKTGVPINMVWWNRVTENNLQTPNPSASEFIPKGGSTSRLSN
VSQSSMSAFSQALFSHPSMGSPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTP
NPANYMVPTSASASVANAVSQPPSTGQVIQKETVGGTTYFYTDTTPAPVTGMVFPNYHIY
HPAAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADIPVPAEVDSYHSLFPL
EPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMWKKIQH
SNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMMSRHFNDPSADSYFTKRKWGQHDGPLP
RQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILVTGKTRLRVNCVGIFDVL
TFDNSQNNPLALMAQFQQADLISLGKVVLALACNSLSGIQRENLQKAMELVTINYSSDLK
NLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAK
LGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNKLDAGV
PEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGQL
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggatggtggtgggttagctgacgctaatctaacggattcatactttagcaccagcttc
attggcgttaatggatttggaagtcctgctgaaacgaagtatcccatgatgcagaggatg
acaaatagcagcagctcccctagccttctcaatgacagtgccaagcagtatgcaggccat
gatccactaacttcaccaaattcatccttgtttaatgactttgctgccctcagcgtttct
caaaggaggaagctggcaaaaccagcatttccttcgtttatctctgacttggaggacaga
tataatacagtcttgcccaggaagtatcgactggggatgctggatgagaggatagttccg
gtgggatcaaaagcaagaaaatcaaagaatcctatcggctgtctggctgacaggtgtaaa
acaggagtacccatcaatatggtttggtggaacagagtcacagaaaacaatttacagaca
ccaaatccttctgcaagtgagtttattcctaaaggaggatcaacctccaggctgagtaat
gtatcccagtcaagtatgtctgccttctctcaagccttgttctctcacccctccatggga
agtcctgctactgctgggttagcaccaggaatgtcactgtcagcaggatcttctcctctt
cattctcccaaaataactcctcatacatctcctgctcctcgaagaagaagtcatactcct
aacccagcaaactatatggtgcctactagtgcctctgcgtctgtcgctaacgctgtgtct
cagcctccatctactggccaggtgatccagaaggaaacagtgggtggaacaacatacttc
tacactgatacaactccagcacctgtcacaggaatggtttttccaaactaccacatctac
catccagctgcacctcatgttgcttacatgcagccaaaagcaaatgcaccttccttcttc
atggcagatgagctcagacaggaactcatcaacagacacttaataactatggcccagatt
gatcaggctgatattcctgttcctgctgaagtggacagctaccacagtctctttcctttg
gaaccactgccaccgcccaatcggatacagaaaacgagcaactttgggtacattacatcg
tgctataaagctgtaaatagtaaagacgacctgccatattgccttcggaggatacatggt
tttcgtctagttaacacaaagtgcatggtattggttgacatgtggaaaaagattcagcac
tcaaatattgtaactttgcgtgaagtgtttaccactaaagcttttggagaacattctcta
gtgtttgcatatgatttccatgctggaggagagaccatgatgagcagacacttcaacgac
cctagtgctgattcctatttcacaaaacggaaatggggtcagcatgatggacctctgcca
cggcagcatgcagggttgcttccagagtctttgatatgggcatatattgtgcagctcagc
tcagccttacggaccattcacacagcaggactggcctgcagagttatggatccaacaaag
attctggtaacaggcaaaacaaggttacgagtcaattgtgttggaatctttgacgttttg
acatttgacaacagtcaaaacaatccactggcattaatggctcagtttcagcaagcagat
ctgatctccctggggaaagttgtgttggctttggcttgcaattctttatcaggaattcag
agagagaatttgcagaaagcaatggaactggtgacaatcaactattcctctgatctgaag
aatctgattttgtatttgctgactgaccaaaacaggcttcgcagtgtaaacgatatcatg
cctatgattggtgcacgattctatactcagttggatgctgctcagatgcgaaatgatgtg
atagaagaagacctagcaaaggaggtgcaaaatggaaggctgtttaggcttctagcaaaa
ttgggaacaatcaatgagaggccagagtttcagaaggacccaacgtggtcagaaactgga
gacaggtatttactaaagctctttcgagatcaccttttccatcaggtgacagaagcgggt
actccttggattgacctcagtcacattatctcatgtcttaacaagttagatgctggtgtg
ccagaaaaaataagcctcatttccagagatgagaagagtgtacttgtggtaacttacagc
gatttaaaacgctgctttgaaaatacttttcaagaactgattgcagccgcaaatggtcag
ttgtag
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