Parus major (Great Tit): 107202478
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Entry
107202478 CDS
T04864
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107202478 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmaj03021
]
107202478 (POLR1B)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107202478 (POLR1B)
Transcription machinery [BR:
pmaj03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
107202478 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
zf-piccolo
Motif
Other DBs
NCBI-GeneID:
107202478
NCBI-ProteinID:
XP_015478742
Ensembl:
ENSPMJG00000004049
LinkDB
All DBs
Position
3:complement(11562210..11576719)
Genome browser
AA seq
1123 aa
AA seq
DB search
MAGTGTEPRPDPHRLRPPRRGTTQRDLTAAHIESFNYAVSEGVYRAVQDVPPVEFALKDK
RLALVLVGVSIAPPAVPAGTVCQERRVFPAECRGLRSTYRGRITADISWSVNDMPQGTIK
QPLGYIPIMVKSKLCNLCGFSPQDLMQHHEEEEEMGGYFIINGLEKVIRMLIMPRRNFPL
AMTRHKWKNRGPGFTEYGVVMHCVKDEHTAINMNLHYLENGCVMVNFIFRKELFFLPLGF
ALKALVNFPDYQIFEELVKGREDDTFFVNCVTEMMRAVVDAGCLTQQNVLDYLGKSFRVK
LNLPEWYSNEQAADFILSNCICIHLTNRTEKFYLLCMMTQKLYTFAKGECMEDNPDSLMN
HEVLTPGQLFLMFLKERLETWLQSVRFVLEKKAEKANINLNTDSLVKAFGMAPDFTKPFE
YLLATGNLRSKTGLGMLQDSGLCVVGDKLNFIRYLSHFRCIHRGAAFSQMRTTTVRKLLP
ESWGFLCPVDTPDGEPCGLMNHMTALCEIVTEMVPVADIPPLLCSLGVTPIDAAPSQPYS
ECYRVVLDGSMVGWVERELAPEIAETLRHFKITQEKRFPARAEVVLIPMTGKPSLYPGLF
IFTNPCRMVRPVRNLSYGKNEWIGTLEQIFMNVATMESEVVPGVTTHQELFPHSILSVVA
NLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYKDRSDNKLYHLHTPQSPLVRPSMYDYYG
MDSYPVGTNSIVAVISYSGYDMEDAMIVNKSSWQRGFAYGSVIKVESIDLSLKASRAGDN
LVFGIRPNDPNAGEKLDADGLPFVGSILQPGDPFYSFMNLNTGETFTVYYPSKEVGIVDN
VRLCSNDRGTGKFKKACITVRVPRNPTVGDKFASRHGQKGILSQLWPVEDMPFTENGMVP
DILFNPHGFPSRMTIGMLIESMAGKSAALHGVSYDATPFTFTEKKSALKYFGETLASAGY
NFFGTEKMYSGISGVELEAEIFVGVVYYQRLRHMVSDKFQVRTTGPRDAVTNQPVKGRNV
EGGIRFGEMERDALLAHGTSFLLQDRLFNCSDGSVAYVCTSCGSLTSPVLEKLSQSSVTS
SRRYSCSLCSQVDTIEVVPVPHVFRYFVAELAAMNIKTKLNVE
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcaccgggacggagccgcgcccggacccgcaccgcctgcggccgccgcggcgt
ggcacgacccagcgcgacctcaccgccgcccacatcgagtccttcaactacgccgtcagc
gagggcgtctatcgcgccgtgcaggatgtgcccccggtggagttcgcgctgaaagacaag
cggctggcgctggtgctggtcggggtgtccatcgcccctcccgccgtgccggccgggacg
gtgtgccaggagaggagggtgttcccggctgagtgccgcgggctccggagcacctaccgc
ggcaggatcaccgccgacatcagctggtcagtgaatgacatgccacaagggactatcaaa
cagccattagggtatattccaatcatggtcaagtccaaattgtgcaacctgtgtggtttt
tctccacaagaccttatgcagcaccatgaggaggaagaggaaatgggaggctactttata
atcaatggattagaaaaagtaatcaggatgctgattatgcccaggcgaaacttcccactt
gcgatgacaagacacaagtggaaaaatagaggccctggtttcacagagtatggggtggtg
atgcactgtgtcaaggatgagcatactgcaataaatatgaaccttcactacttggaaaat
ggctgtgtcatggtgaatttcatttttcgcaaagagttgttcttcctccccttgggattt
gctctgaaggcattagttaacttcccagactaccagatttttgaagagttggtgaaagga
agggaagatgacaccttttttgtgaactgtgttactgagatgatgagagcagtggtggat
gccggctgtttgacacagcaaaacgtcttggattacctgggaaagagcttcagagtgaaa
ctcaacctgcctgagtggtacagcaatgaacaggctgcagatttcattctgagcaattgt
atctgcattcacctgaccaatagaactgagaagttctacctgctctgtatgatgacccag
aagctctatacttttgccaaaggagagtgcatggaggataatccagacagtctcatgaat
cacgaggtgcttaccccaggacagcttttccttatgttcttaaaggagaggcttgaaacc
tggctgcaatctgttaggtttgttttggagaaaaaagcggaaaaggcaaatatcaaccta
aatacagacagcctggtgaaggcatttggcatggcaccagacttcaccaagccatttgag
tatctgcttgcaactggtaacctgaggtctaaaacagggctgggcatgttgcaggacagt
ggtctctgtgtggtgggggacaagctgaatttcatccgctacctctcccacttccgctgc
atacacagaggggcagcgttttcccagatgagaaccacgactgtccgcaagctgctgccc
gaatcctggggcttcctgtgccccgtggacaccccggatggagagccctgtgggctgatg
aaccacatgacagctctgtgtgaaatcgtcaccgagatggtgcccgtggcagacattcca
cctttgttatgttccctgggtgtcacccccattgatgcagctccaagccagccttactca
gagtgctacagagttgtgctggatggctccatggtgggctgggtagagagggagttggct
cctgagattgcagaaactctccgccatttcaagataacacaagagaagagatttcctgca
cgggcagaagtggtccttatcccaatgacaggaaaacccagcttgtatcctgggctcttc
attttcactaacccttgccggatggtgcggcctgtcaggaacctatcctatggaaaaaat
gaatggattgggactctggaacagatcttcatgaatgtggcaacaatggagtcagaggtg
gtgcctggagtgaccactcaccaggaactcttccctcacagtattctgagcgtggtggcc
aatctcattcccttctccgaccacaaccaaagtccacggaacatgtaccagtgccagatg
ggaaagcagaccatggggtttcctgtttacaactacaaggatcgctcagataacaagctg
taccacctgcacaccccccagagccctctggtgaggcccagcatgtatgactattatggg
atggacagctatcctgttggcaccaactccatcgtggctgtcatctcctacagtggctat
gacatggaagatgcaatgattgtaaataaatcttcctggcagagaggatttgcttatgga
agtgtaatcaaggtggagagcattgacctttcccttaaagccagcagggcaggcgataat
ttagtatttggcatcaggcctaacgatccaaacgctggggagaagctggatgctgatgga
ctgccttttgttgggtctatcctgcagcctggggaccccttctacagcttcatgaacctc
aacacaggggagaccttcactgtgtactatccgagtaaagaagtgggcattgtggataac
gttaggttgtgcagcaatgaccgtggcactgggaagttcaagaaggcttgcatcactgtg
agggttccccgaaatcccactgttggagacaaatttgccagccgtcacggacagaaaggc
atcctaagccagctctggcccgtcgaggacatgcccttcacagagaatgggatggttcca
gacatcctcttcaaccctcacggctttccctcccgcatgaccattgggatgttaattgag
agcatggcagggaagtcagcagccctgcatggggtctcctatgatgccactcccttcacc
ttcaccgagaagaagtctgctctgaaatactttggtgagactttagcgagtgcgggttac
aacttctttgggacagagaagatgtacagcggcatcagcggggtggagctggaggcagag
atctttgtgggcgtggtgtactaccagcgcctgcgccacatggtctctgacaagttccag
gtgaggaccacggggccccgagatgctgtcaccaaccagcctgtcaaggggaggaatgtg
gaaggtgggatccgcttcggcgagatggagcgagatgctctgctggcccatggcacatcc
ttcctgctgcaggaccgcctgttcaactgctctgacggctccgtagcctatgtgtgcaca
agctgcggcagcctgacatcccctgtgctggagaaactgtcccagtcctctgtgaccagc
agcaggaggtattcctgctccctctgcagccaggtggacaccatcgaggttgtccctgtg
ccccatgtcttccgctactttgtggctgagctggcagccatgaacataaaaacaaagctc
aatgtggagtag
DBGET
integrated database retrieval system
