Parus major (Great Tit): 107202604
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Entry
107202604 CDS
T04864
Symbol
ZC3H12D
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107202604 (ZC3H12D)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
107202604 (ZC3H12D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
zf-CCCH_4
zf-CCCH_2
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
107202604
NCBI-ProteinID:
XP_015478994
Ensembl:
ENSPMJG00000007383
LinkDB
All DBs
Position
3:46626123..46643701
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AA seq
612 aa
AA seq
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MALASSIPSKAAPPHSKKVSAAGVEVHQSKMDFFCKLGYSKQDICKVLENLGQEALEDDV
LKELIRMGSKPQALENQAQPSQLKLVARGACSSTAGLKRLGEDESDSSDSLRPIVIDGSN
VAMSHGNKEVFSCWGIQLAVDWFRERGHTYIKVFVPLWRKEPPRQDSPIADQHILEELEK
QSILVYTPSRKVKGKRVVCYDDRYIVKVAYEKDGVIVSNDHYRDLQNENPEWKWFIEQRL
LMYSFVSNRFMPPDDPLGRHGPTLSNFLSKKPVLPERKWQPCPYGKKCTYGNKCKFYHPE
RQHQAQLSVADELRAKTKVPIAQGKEEERCQRLPYAARGEPAPCDACTEPLREARGCSGP
SCYPGRSQGSCSEQTFRAWAGSPGSDLGLEQRLPQAEPLLEEMSAVSIGDTYGCSWSLCP
SQDRGVTDSPQPCAGLRHKLFSLHHPQSLEQAGSARRPFQLRALPAAPGGMCGEHGWAQE
RHGSHSVPAGAQHKQGPESQHAALLQAPALFPDSLPLYGEQQAQQHHCIPSRPPGQPLLS
DSSDGTGLFHKALAYPSASYRDYWPTPAARLPSARQLNTHRELCSSYPYGVMSQALALYP
SIQDKGTGAPPL
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcactggccagttcaattcctagcaaagcagcaccaccacactccaaaaaagtttct
gcagcaggggtggaagtgcaccagagcaagatggattttttctgcaagctgggctatagt
aagcaggacatctgcaaagtgctggagaacctgggccaagaggcgctggaggatgatgtg
ctgaaagagctgattcggatggggagcaaacctcaggctctggagaaccaggctcagcct
tcccagctaaagctggttgctcgtggagcttgtagcagcacagcgggactgaagaggctt
ggagaagatgaaagtgattcttctgattccttgagacccattgtgatcgacggcagcaat
gtcgccatgagtcatggaaacaaggaggtgttctcctgctgggggatccagctggcggtg
gattggtttagagagaggggtcacacttacatcaaggtttttgtcccactctggagaaag
gaaccccctcgacaagacagccccattgcagatcagcacattcttgaggagctggaaaag
caatctatcctggtctacacaccctctcggaaggtgaagggcaagagggtggtttgctat
gatgatcgctacatagtgaaagtcgcgtatgagaaagacggagtcattgtttccaatgac
cactaccgggatctccaaaatgaaaaccccgagtggaaatggtttattgagcagcgactt
ctcatgtactcttttgtcagtaacaggtttatgcctcccgatgatccactaggccggcac
ggacccaccttaagtaacttcctcagcaagaagccagtgctgcctgaaaggaaatggcag
ccttgcccttatggtaaaaaatgtacctatggcaataaatgcaaattttaccatccagag
agacaacatcaagctcagctttcagtcgctgatgagctcagggccaaaacaaaggtcccg
atagcccaggggaaggaggaggagaggtgtcagcgcttaccgtacgcagccagaggagag
cctgcaccctgcgatgcctgcacagaacctctgcgggaagccagaggctgctctgggcct
tcctgctacccaggcaggtcccaggggagctgctctgagcagacattccgtgcctgggcc
ggcagccctggctctgacctggggctggagcagcgcttgccgcaggcggagccgctcctg
gaggagatgtcagcggtgtccatcggtgacacctacggctgcagctggtccttgtgcccc
tcccaggaccggggggtcacggacagccctcagccctgcgctggcctcaggcacaaactg
ttctcacttcatcaccctcagagcctggagcaggccggctcagccaggcgccctttccag
ctccgagcgctcccagctgcgccaggcgggatgtgcggggagcacggctgggctcaggag
cgccacgggagccactccgtccctgctggtgctcagcacaagcagggcccggagagccag
cacgctgctctgctgcaggccccagctctgttccctgacagccttcccctgtacggtgag
cagcaggcgcagcagcaccactgcatccccagccggcccccgggacagccccttctgtca
gattccagcgatggaacgggcttattccacaaggcccttgcttaccccagtgcctcttac
agggactactggcccaccccggctgcaaggcttccctctgcccggcaactaaacacacac
agggagctgtgctcctcttatccctacggtgtgatgagccaggccctggctttgtacccc
agtatccaggataaggggactggagcacctcccctatga
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