KEGG   Parus major (Great Tit): 107202655
Entry
107202655         CDS       T04864                                 
Name
(RefSeq) cullin-4A isoform X9
  KO
K10609  cullin 4
Organism
pmaj  Parus major (Great Tit)
Pathway
pmaj03420  Nucleotide excision repair
pmaj04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107202655
  09124 Replication and repair
   03420 Nucleotide excision repair
    107202655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmaj04121]
    107202655
   03400 DNA repair and recombination proteins [BR:pmaj03400]
    107202655
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmaj04147]
    107202655
Ubiquitin system [BR:pmaj04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     107202655
DNA repair and recombination proteins [BR:pmaj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      107202655
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      107202655
Exosome [BR:pmaj04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   107202655
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 ADH_zinc_N
Other DBs
NCBI-GeneID: 107202655
NCBI-ProteinID: XP_015479073
Ensembl: ENSPMJG00000011594
LinkDB
Position
1:25528518..25586227
AA seq 765 aa
MADEPQKKPHLSALVGHTNGLTKPASLAATGTRSTGGGGGGATASSKKLVIKNFRERPKL
PDNYTQDTWQKLHEAVGAIQSSISIKYNLEELYQAVENLCSYKVSATLYKQLRQVCEEHV
KAQILQFREDSLDSLLFLKKINKCWQDHCRQMIMIRSIFLFLDRTYVLQNSVLPSIWDMG
LELFRNHIISDKQVQTKTIDGILLLIERERNGEAVDRSLLRSLLSMLSDLQVYKESFEQR
FLEETNCLYAAEGQRLMQEREVPEYLHHVNKRLEEEGDRVITYLDHSTQKPLIACVEKQL
LGEHLSAILQKGLDSLLDENRIPDLTQTYQLFSRVKGGQQILLQHWSEYIKNFGTTIVVN
PEKDKDMVQELLDFKDKVDHIIEVCFQKNEKFINLMKESFETFINKRPNKPAELIAKYVD
SKLRAGNKEATDEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKS
MLSKLKHECGAAFTSKLEGMFKDMELSKDVMVQFKQYMQNQSDPGNIDLTVNILTMGYWP
TYTPMEVHLNSEMIKLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLF
QTLVLLMFNEGDEFSFEEIKMATGVEDSELRRTLQSLACGKARVLIKNPKGKDVEDGDKF
IFNDDFKHKLFRIKINQIQMKETAEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNL
LVSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDNPNQYHYVA
NT seq 2298 nt   +upstreamnt  +downstreamnt
atggcggacgagccgcagaagaagccgcacttgtcggccttggtgggacacacgaacggg
ctcaccaagcccgcctcgctggccgccaccggcacccgctccacgggaggaggaggcgga
ggcgcgaccgcctcctccaagaaactcgtgatcaagaacttcagagaaagacccaaatta
ccagataattatactcaggacacctggcagaaacttcatgaagcggtgggagcaatacag
agtagcatttctattaaatacaaccttgaagaactctaccaggctgttgaaaatctctgt
tcctacaaagtttctgctacactgtacaaacagctgcgacaagtctgtgaagaacacgtg
aaagcacaaatccttcagtttagagaagattctctggatagtcttttatttttaaagaag
ataaataaatgctggcaagatcattgcagacaaatgatcatgataagaagcattttctta
tttttggatcgtacatatgtgcttcagaattcagtgcttccttctatatgggatatgggt
ctagagttatttagaaaccatatcattagtgacaagcaagttcaaaccaagactattgat
ggaattctcctgctaattgaacgagaacgaaatggtgaagctgtggacaggagtttgctg
cggagtttgttgagcatgctctcagatctgcaggtttacaaggaatcatttgaacagagg
tttctggaagagactaattgtttatatgctgcagaaggccaaagattaatgcaggaaaga
gaggtcccagaataccttcaccatgttaataaacgtttggaagaagaaggagacagagta
ataacatatttagatcacagcacacaaaagcccctgattgcttgtgtggagaagcagcta
ctaggagaacacttatcagctattttgcaaaaaggacttgatagcctgcttgatgaaaat
agaataccagatttgacccagacataccagctattcagccgggtaaaaggtggacagcag
atccttttgcaacactggagtgaatacatcaagaactttgggacaacaatagtggttaat
cctgaaaaagacaaggatatggtgcaagagctactagattttaaggataaagtggaccat
atcatagaagtgtgctttcagaaaaatgaaaaatttataaacttgatgaaggagtccttt
gaaacatttatcaacaagagaccaaataagcctgcagaattgatagcaaaatatgtggat
tccaagttaagagctggtaataaagaagcaacagatgaagagctggaaagaatccttgac
aaaatcatgatcatatttagattcattcatgggaaagatgtgtttgaggcattttataag
aaagacttggccaaaagactgctggttggaaaaagtgcatcagtagatgctgagaagtcc
atgttgtcaaaacttaaacatgaatgtggtgcagcttttaccagcaaactggagggcatg
ttcaaggacatggaactgtccaaagatgtcatggtacagttcaagcagtatatgcagaac
caaagtgacccaggaaatatagacctgacagtaaatatattaactatgggatactggcca
acttacacacctatggaagtccacttaaattcagagatgataaagcttcaagaggtattt
aaaaccttttacttgggaaaacacagtggtcgaaaacttcagtggcagacgactttaggg
catgctgttctaaaggcagaatttaaagaagggaagaaggagtttcaagtatcgctcttt
cagacattagtattacttatgtttaatgaaggagatgaattcagttttgaagaaattaaa
atggctactggtgtagaggacagtgaattaagaagaaccttgcagtctttagcttgtgga
aaagcaagagtattgattaaaaatccaaagggcaaagatgtagaagatggagataaattc
atctttaatgatgatttcaagcataaattgtttagaataaagatcaaccagattcaaatg
aaagaaacagctgaggaacaggtcagcacaactgaaagagtatttcaggacaggcaatat
cagattgatgctgctattgtacgaataatgaagatgaggaagactcttggtcataatctt
cttgtttctgaactgtataatcaactgaaatttcctgtgaagcctggagacttgaaaaag
agaattgaatctctcattgacagagactatatggagagagacaaagacaaccccaatcag
tatcactatgttgcataa

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