Parus major (Great Tit): 107202721
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Entry
107202721 CDS
T04864
Symbol
PRPF31
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107202721 (PRPF31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmaj03041
]
107202721 (PRPF31)
Spliceosome [BR:
pmaj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107202721 (PRPF31)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
107202721
NCBI-ProteinID:
XP_015479127
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Position
4:13611579..13613081
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AA seq
501 aa
AA seq
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MSLADLEEVAGEEDEAEGSRGAEXELLTEDVREDLEPPEARXSVRSAAKLWGSKAFAEVT
QKIEEYIGEQPRAAEVLGPVEAAPKYQLIMDANKLMVETENKLNIIHKFIWDKYSKQFLE
LDSLVPNXQTLNELGNSLDKCKNNKNVQQILSNSTITVVSMTASTTQGQQLSEEELGRIE
DVCGLALSRAKLHIYKYVXSCMSFIAPNLSLILRASLAAKIMGVAGGLTPLSKLPACNIL
LLGAQRWTLSGLSSTSILPHPGFIYHSNIVRSLPLDLRRKASRLVVAKCTLAARXDSFHE
RQDRKVGCGLKEEIEPKFXKCQEPAPVKLLPVPLDRLRVKREGWRKMKEHLELTQIHKQA
NRMNVWETEDDPYQEDLRFSVGHLGKASSGHVRQTQVNEATKAWISKVLQRTLQKQSIIY
RGNSTIRDHRLGMAPSMASFIPLQGLEGVNLQAAEKKEAEASLKYFSSMAKFLKVKGNKN
GDPIPLTPLGYPNPTLQPPNS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggcagacctggaggaggtggcaggggaggaggatgaggccgaaggctccaga
ggagcagaangggagctcttgactgaggatgtgagggaggacctggagccacctgaggcc
aggtagtctgtgcgaagcgctgccaagctctgggggtccaaggcttttgctgaggtcaca
cagaaaattgaggaatacatcggggaacagcccagggcagctgaagttttgggaccagtg
gaggcggcccccaaataccaattgatcatggatgcaaacaagctcatggtggagactgag
aacaagctcaacatcatccacaagttcatatgggacaaatattccaaacagttcctggag
ctagattcactggtgcccaatnnccaaactctcaatgaattggggaattccctggataaa
tgcaagaacaacaagaatgtgcagcagatcttgtccaattccaccatcacagtggtcagc
atgacggcctccaccacccaggggcagcagctgtcagaggaggagctgggcaggatcgag
gatgtgtgtggcctagcactgagcagggccaagctgcacatctacaagtatgtgtagtcc
tgcatgtccttcatcgcccccaacctctccctcatcctcagggcctccttggctgccaag
atcatgggggtggcagggggactgaccccgctatccaagctgccggcctgcaacatcctc
ttgctgggggcccagcgctggacactgtccggcctctcctctacctccatcttgccccac
cctggcttcatctaccacagcaacatcgttcgatccctgcctctggatttgaggagaaaa
gcgtcacggctcgtggtggccaagtgcacgctggcagccaggntggacagcttccatgag
agacaggacaggaaggtgggctgtgggctgaaggaggagatcgagcccaagttcncaaag
tgtcaggagcccgccccagtgaagctgctgccagtgccgctggacaggctgagggtgaag
agggagggctggcggaagatgaaggaacacttggagctgacacagatccacaaacaggcc
aacaggatgaacgtctgggagactgaggatgacccctaccaggaggacctcaggttcagt
gtgggccacctgggcaaggccagcagtggccatgtacgccagacccaggttaacgaggcc
accaaggcttggatcagcaaagtcttgcagaggacactgcagaagcagagcatcatctac
aggggcaattccacaatccgggaccacaggctgggcatggccccgagcatggcctcattc
attcccctgcaggggctggagggcgtgaacctgcaagcagcagagaagaaagaggctgag
gccagcctgaaatatttctccagcatggccaaatttctcaaggtcaaggggaacaaaaat
ggggaccccattcccctgaccccactgggatacccaaatcccaccctgcaacctccaaat
tcttga
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