Parus major (Great Tit): 107202941
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Entry
107202941 CDS
T04864
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmaj04131
]
107202941 (LRBA)
Membrane trafficking [BR:
pmaj04131
]
Endosome - Lysosome transport
Others
Others
107202941 (LRBA)
Endosome - Golgi transport
107202941 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
107202941 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_IFT140_1st
DUF4800
WDR90_beta-prop_4th
SUKH_6
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
107202941
NCBI-ProteinID:
XP_015479509
Ensembl:
ENSPMJG00000008703
LinkDB
All DBs
Position
4:10451496..10819391
Genome browser
AA seq
2856 aa
AA seq
DB search
MASEGRQVVQPTGDDGGGAGKEGNASEGGSVLQPLNPGVPIRGIKMKFAVLTGLVEVGEV
SNRDIVDTVFNLLVGGQFDLEMNFIIQEGEGITSMVDLLDKCDITCQAEVWSMFTAILKK
SIRNLQVCTEVGLVEQVLRRIDRAENMIADLLVDMLGVLASYNLTVRELKLFFSKLQGEK
GRWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMD
PVNNINVDKDKPYLYCFRTNKGLGYSAHFVGGCLIVTSIKSKGKGFQHCVKFDFKPQKWY
MVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQ
MTSVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLDEHHKLLLYDGKLSSAIAFM
YNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSALHSIGGVQVLFPLF
AQLDYRQYSSDHIDTTVCSTLLAFIMELLKNSIAMQEQMLSCKGFLVIGYSLEKSSKAHV
TRAVLELCLAFSKYLSNLHNGVPLLKQLCDHVLLNPAIWIHIPAQVQLTLYTYLSTEFVA
TVNIYGAIRRVGTVLLVMHTLKYYYWVVNPQDRSGITPKGIDGPRPTQKEILSLRAFLLM
FIKQLVMKDYGIKEDELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPGSMIPAFDQRNG
LQVVYKLLASQSEGIRVQALKVMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTSLFT
MTTYNVLFEILTEQICTQVIHKQHPDPDSTVKIQNPQILKVIATLIRNSPQCPETLEVRR
AFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCCFNPKTSEEQKITEMVYTIFRILLYH
AIKYEWGGWRVWVDTLSITHSKVTFEMHKESLSQMYKEYQGKGGEGSGVHSSTPIRTISG
ISKEAETKGKQQSLELEENAAAAPCITAGDMQCRTEKNEKENSSDGGQQTHSVSNHKEEL
EGEDMGTTKDLKAVPCVEFSPEPETVKASVSEISTGIAEAIEDFNKAVELVEETVAVTAS
SLAMQTPVEGETPTSPERLEKLAGEMEDEDDFVDLKAESSLSLPSEELAERNKECDPNAS
KVTKQEVTPEKQSEPGLLKSEGTECVDEKKQELTLPEMVSSAVPEVVTQPDSAGKKKLKE
GNVITSETKTTVENANAHVAEPAGASDKRIAKLDVSSVASDTERLELKANMCLEAPLPPR
SMPEPSRQQVSSGQELAAPSDGQRRDMRSGVFRIPEFKWSLMHQRLLTDLLFSIETDIQM
WRSHSTKTVMDFVNSSDNVVFVHNTIHLISQVMDNMIMACGGILPLLSAATSATHELENI
EPTQGLSVESSLTFLQRLINLVDVLIFASSLGFTEIESEKNMSSGGILRQCLRLVCAIAV
RNCLECQQHAQIKPIGDTGKNKKAVQGFVGSGKSAAKSPVDIVTGGISPIRDHDRLLQDM
DINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNERRPPNQSQSLKES
ENENNETPAAVVESPSVALGASASTEDSESTASMQRRDSGLGEEAAPAQTNCSGGAAEAG
PLSVSAGPDAVSEVLCTLSLEVNKSQESGSETGTEESKSVASVPAAKNVNVKDILRSLVS
TPADGTAVDAALLPPTFLGVLGDGAAEQPVQFHSFDRSVVVPTKKSSISSSTAAIGAPTN
AVSVVSSVDSSQAPDLSGESPGRGSSNSKLPSVPAVSSVPEDSASNMSITDRLEHALEKA
APLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLMCMKPSSSVVELVMLLCSQEWQNSIQ
KNAGLAFIELVNEGRLLSQTMKEHLVRVANEAEFILSRQRAEDINRHAEFESLCAQYSAD
KREEEKMCHHLIMAAKYRDQVTATQLIQKIINILTDKHGAWGSSAPSRPHEFWRLDYWED
DLRRRRRFVRNPLGSTHPEATLRAAGEHAPEEDILVKGKQSIKSQVLGNQNSESEILLEG
DDDIMSFMEEREVENLTGPVSLSTPAQLVAPSVVVKGTLSITVSELYFEVDEEDPSFKKI
DPKILAYTEGLHGKWLFSEIRSIFSRRYLLQNTALEIFMANRVGVMFNFPDQATVKKVVN
CLPRVGIGTIFGLPQTRRISLASPRQIFKASNMTQRWQHREISNFEYLMFLNTIAGRTYN
DLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIGALNPKRAAFFAERYESWEDDQVPK
FHYGTHYSTASFALTWLLRIEPFTTLFLNLQGGKFDHADRTFSSISRAWRNSQRDTSDIK
ELIPEFYYLPEIFVNSNNYNLGVMDDGTVVSDVELPPWAKTPEEFVRINRLALESEFVSC
QLHQWIDLIFGYKQQGPEAVRSLNVFYYLTYEGAVNLSSITDSVLREAVEAQIRSFGQTP
SQLLIEPHPPRSSAMQVYLLLQSPLMFTEQAQQDVIMVLKFPSNSPVTHVAANTQPGLTT
PAVITVTANRLFAVNKWHSLPAHQGAVQDQPYQLPVEIDPLIASNTGMHRRQITDLLDQS
IQVHSQCFVITSDNRYILVCGFWDKSFRVYSTDSGKLMQVVFGHWDVVTCLARSESYIGG
NCYILSGSRDATLLLWYWNGKTNIIGDNPRGDFATPRAILTGHDYEITCAAICAELGLVI
SGSKEGPCLIHSMNGDLLRTLEGHERLQGPESCLRPKLIQASREGHCVIYYENGLFCVFS
VNGRLQATMETDDKIRAIQLSRDGQYLLTGGDNGVVMVWQVWDLKRLFAYPGCDAGIRSM
ALSYDQRCIMTGMASGSIVVFYNDFNRWHHEYQTRY
NT seq
8571 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgaaggcagacaagttgttcagccaacaggtgatgatggaggaggagcggga
aaagaaggaaatgcttctgaagggggaagtgtgctgcagcctttgaatccaggagtcccc
atccgaggcatcaagatgaaattcgctgtgctgacaggactggtggaagttggtgaagtg
tccaacagagacatagttgacactgtgtttaacctgctcgttgggggccaatttgacttg
gaaatgaactttatcatccaagaaggagagggcatcacctccatggtggacttactggat
aagtgtgacatcacctgccaggctgaggtttggagcatgtttacagcaatcctgaagaaa
agcatacggaatctccaggtctgcacggaagtggggcttgtagaacaagtgctcaggagg
attgatagagctgaaaacatgattgcagatctcttagtggacatgctgggtgtgttggct
agctataacctgacagttcgagagctgaagttattcttcagcaagctgcaaggagaaaaa
gggagatggccaccacatgctgggaagttattgtctgtgttaaaacacatgcctcagaag
tatggacctgatgccttcttcaactttccaggaaaaagtgctgcagctattgccttacct
cctatagccaagtggccataccagaatggatttactttccacacttggctaagaatggat
cctgtaaataatattaatgtggataaggataagccttatttatattgttttcgaacaaac
aaaggacttggttattctgctcactttgttggaggctgcttgattgtaacgtccataaaa
tcaaagggaaaaggtttccagcactgtgtaaaatttgatttcaagccacaaaagtggtac
atggtgactattgtgcacatctataaccgctggaagaacagtgaactccggtgttacgtt
aacggggaactggcatcttatggggaaataacgtggtttgtcaacaccagtgatacattt
gacaaatgtttcctgggctcttcagaaacagcagatgccaatcgagtgttttgtgggcag
atgacatctgtttacctttttagtgaggctctcaatgctgctcagatctttgccatttat
cagcttggcctgggatataagggaacgttcaagttcaaggcagaaagtgatctcttcctt
gatgaacatcacaaattgttgctatatgatggcaaactctccagtgctattgcttttatg
tacaatccaagggctacagatgcacagctgtgtttagagtcatcccctaaggataaccct
tctatttttgttcattcaccacatgccctcatgctgcaggatgtgaaagcagtcttgaca
cactccatccaaagtgccctgcactccattggaggagttcaggtgcttttccctctcttt
gcacagttggactataggcaatattcctcagaccacattgatacaactgtttgttctact
ttattggcattcattatggagttgttgaagaactctattgctatgcaagaacagatgctt
tcctgtaaaggcttccttgtgataggatacagcctagaaaagtcttccaaagcccacgtt
accagagctgtgctagaactttgccttgccttctcgaaatacctgagcaatttacacaat
ggggtgcccctgctaaagcagctgtgtgatcatgttctcctgaatcctgcaatatggatt
catatcccagcacaggttcagctgaccttgtacacttacctgtcgactgagtttgttgcc
actgttaacatttatggagcaatccggcgggttgggacagttctgttggtcatgcacacc
ctcaagtattattactgggtggtgaaccctcaggatcgcagtgggataactcccaagggc
atagatgggccacggcctactcagaaggagattctatccctccgagcatttttgctgatg
ttcattaaacagctggtgatgaaggactatggaataaaagaagatgaattacaggctatc
ctcaattacctacttactatacatgaggatgacaatttaatggatgtcctgcagttgctg
gttgctctgatgtcagagcatcctggttctatgatccctgcatttgatcagaggaatgga
ttacaggttgtctacaagcttttagcatcacaaagtgaaggcatcagggtgcaagctctg
aaagtgatgggatatttcttgaagcatcttgctccgaagagaaaagctgaagtcatgctt
ggacatggattgttctctttgttggctgaaaggctgatgcttcagacaagcttattcacc
atgaccacgtacaatgtcctgtttgagattctgactgaacagatttgcactcaagtaata
cataaacaacatcctgacccagattcaacggtgaagatacaaaatcctcagattttgaag
gttattgcaaccctgatccgtaattctccacagtgtccagaaactctggaggtccggcga
gcctttctctcagatatgattaaactgtttaataacagcagagaaaacaggaggagtttg
ttgcagtgctctgtctggcaggagtggatgctttccctttgttgttttaatccaaagact
tctgaggagcagaagataactgagatggtgtacaccatatttcggattttgctgtaccac
gcgataaaatatgagtggggtggctggcgtgtgtgggtggatacactgtcaatcacacat
tcaaaggtaacttttgaaatgcacaaggagagtctttcccaaatgtacaaggagtaccaa
gggaaaggaggtgaagggagtggagtacattcttcaactccaattagaacaatctctggg
attagcaaagaagctgaaaccaagggaaaacaacaatctctggagttagaagagaatgct
gctgctgctccttgcattactgctggtgatatgcagtgcagaactgaaaaaaatgagaaa
gaaaactcgtcagatggtgggcaacaaactcattcagtgtctaatcataaggaggaatta
gagggggaggatatgggtactacaaaggatttaaaagcagtgccttgtgtggaattttct
ccagaaccagaaacagtgaaggccagtgtctcagaaatcagtactggaatagctgaagca
attgaagattttaacaaagctgttgagcttgtggaagaaacagttgctgtcactgcttcc
tctttagccatgcaaacccctgtggaaggagaaactcccacaagtccagaaagactggaa
aaattagcaggagagatggaagatgaagatgactttgttgatttgaaagctgaaagtagt
ttgtctttaccttcagaagagcttgcagaaagaaacaaggaatgtgaccctaatgcaagc
aaagtgacaaagcaggaagtgacaccagagaagcaatctgaacccgggcttttaaaatct
gagggtactgaatgtgtggatgagaaaaaacaagagctgactttgccagagatggtgagt
tctgcagttccagaagtagtaactcagccagattcagcaggaaaaaagaagctgaaggaa
ggaaatgtaattactagtgaaaccaaaacaactgtggaaaatgcaaatgcacatgtggca
gaacctgctggagcctctgacaaaagaattgccaagcttgatgtttccagtgttgcatca
gatacagaaagactggagctgaaagctaacatgtgtctagaagcacctctgccccccaga
tccatgcctgagccctcaagacagcaggtttcctcaggacaggagctggctgctccatcg
gatgggcagaggagggacatgaggtcaggtgtgttccgtattcccgagttcaagtggtca
ctgatgcaccagcgcctgctcacagacctgctcttctccatagaaacagatattcagatg
tggagaagccattctacaaaaactgtgatggattttgtgaatagcagtgacaatgtggtg
tttgtgcacaacacaatccatctcatctctcaagtgatggacaacatgatcatggcctgt
ggtggtatcttgccattgctttctgctgccacatctgctactcatgaattggagaatatt
gagccaactcaaggactttcagtagaatcatctttaacatttctccagagattaatcaac
cttgtggatgtgctaatttttgcaagctctcttggtttcactgaaattgagtctgagaaa
aatatgtcatctggaggaattctgcgacaatgtcttcgtctggtgtgtgcaatagcagta
agaaattgcttggagtgtcagcagcatgcacagataaagcctattggagacactggcaag
aataaaaaagcagtgcaaggctttgtaggatcaggaaaatctgcagcaaagagtccagtg
gacattgtgactggtggcatttctccaataagggaccatgacagacttctgcaggatatg
gatattaatcgcctccgagcagtagtgttcagagatatagaagatagtaaacaggctcag
tttttggctttggctgttgtatattttatttctgtgctcatggtttcgaaatacagagat
atactggaaccccagaatgaaagacgaccaccaaaccaaagccagtcactcaaggaatcg
gaaaatgaaaataatgagactcctgctgcagtcgtggaaagcccatctgttgctcttggt
gcttcagcctctactgaagattcagaaagtacagcatctatgcagagaagggattctggt
cttggggaggaagcagctccagcacaaacaaactgttcaggtggtgctgctgaagcagga
cctctgagtgtcagtgcaggcccagatgcagtcagtgaagtcctgtgcacgctctcgtta
gaagtcaataaatctcaggagagcggaagtgagacaggaactgaagagagtaaatctgtg
gcttctgtgcctgctgcaaaaaatgtcaatgtgaaggacatcttgagaagcctggtgagc
acaccagctgatgggactgcagtggatgctgctcttctgccaccaaccttccttggagtt
cttggtgacggagctgctgagcagcctgtgcagttccattcctttgacaggagtgttgtt
gtacctacgaagaaatcaagcatttcatcttctacagctgctattggtgctcctacaaat
gctgtcagtgtggtttcttctgtagattcatcccaagccccagatttgtcaggagaatct
cctggaaggggatcatctaattcaaaattgccatctgttcctgcagtttcttcagtgcct
gaggattctgcctccaatatgagtattacagacaggcttgagcatgctttggaaaaagct
gccccacttctgagagagatttttgtggattttgctccctttctttctcggactcttttg
ggcagccatgggcaggagttgctgatagaaggtacaagtcttatgtgcatgaaacctagc
agttcagttgtggagctggtgatgctcctttgctctcaggagtggcaaaactctatacag
aaaaatgctggcctggcctttattgagcttgtcaatgaaggaaggctgctgagtcaaact
atgaaggagcatctggtacgagtggctaatgaagcagaatttatcctgagcagacagagg
gcagaggatattaaccgccatgctgaatttgagtcactgtgtgcccagtactctgcagac
aaacgggaagaagaaaaaatgtgtcatcatttgatcatggcagccaagtaccgggaccag
gtgactgcaacacaactaatacagaaaattatcaacatcctgacagacaagcatggagcc
tggggaagctctgcaccaagtcgtcctcatgagttctggcgcctcgactactgggaagat
gacttgcggcgccggcgacgatttgtgcgtaaccccctcggatcgacacatcctgaagcg
acactcagggcagccggagaacatgctcccgaggaggatatacttgtcaaagggaagcag
tccatcaagagtcaagttttaggaaaccagaactcagaaagtgagattctcttggaaggt
gatgacgatatcatgtcattcatggaggaaagagaagtggagaacttgacaggtccagtg
tccctcagcacaccagctcagcttgtggcaccgtccgtggtagtgaagggcaccctctcc
atcactgtttctgagctctactttgaggtggatgaagaagatcctagttttaagaaaatc
gacccaaagattctggcatatacagaaggactccatggaaaatggcttttctcagagatt
cgctctatcttttcccgacgttacctcttgcaaaatacagcactggagatattcatggca
aatagagtgggtgtcatgttcaacttccctgatcaagcaacagtgaagaaagtggttaac
tgtctacctcgggttggtattggtaccatctttggactaccccagaccagacgcatttct
ttggctagtccacgacagatcttcaaagcttccaatatgactcagcggtggcaacaccga
gagatttccaactttgaatacttgatgtttctaaacactatagcaggtcgaacttacaat
gatttgaatcagtaccctgtcttcccttgggttatcaccaactatgagtcagaggagttg
gacctcacacttcctagcaacttcagggatttgtcaaagcctattggagctttgaaccca
aagagagcagcattctttgctgagagatatgaatcatgggaagatgatcaggtcccaaaa
tttcactatggcactcattattcaacagcaagttttgcactcacgtggttgttaaggatt
gaacccttcacaacacttttcctgaatctacaaggtgggaaatttgatcatgcagatagg
acattttcgtctatttcaagagcgtggcgcaacagtcagcgtgacacttctgacatcaag
gaattgattcctgaattttattacctcccagagatatttgtcaacagcaacaattacaat
ctgggagtgatggatgatggaacagtggtgtctgatgttgaacttccaccgtgggccaaa
accccagaagaatttgttcgcataaacaggctggcattagaaagtgagtttgtttcctgc
cagcttcaccagtggattgatcttatttttggctacaaacaacaaggaccagaggctgtt
aggtccctgaatgtattctactatttgacttacgaaggagctgttaatttaagttcaata
acggattctgtactgagagaggctgtggaagctcaaatacgcagttttggacagacccct
tcccaactactcatagaaccacatcctccaagaagttctgccatgcaggtgtatctcctc
ctgcagagccccttgatgttcacagagcaagcccaacaggatgttatcatggtcctgaag
ttcccgtccaactccccggtcactcacgtggctgccaacacccagcctggcctgactact
ccagctgtgatcacggtcactgcaaacaggctctttgctgtgaacaagtggcacagcctc
cctgctcatcaaggtgctgtacaagaccagccttaccagctgccagtggaaatcgatcct
ctcatagccagcaatacaggtatgcacaggaggcaaatcactgaccttttagaccaaagc
attcaggtacattcccagtgttttgtcatcacctccgacaatcgttacatcttggtctgt
ggcttctgggacaagagtttccgtgtttactctactgactcaggcaaactgatgcaagta
gtgtttggccactgggatgttgtgacctgtctggctcgttccgagtcctacattggaggg
aattgttacatcctctcaggatctcgggatgcaaccttgctgctctggtactggaatggc
aaaaccaacatcatcggtgataacccaagaggtgattttgcaactcctcgagctattctg
acaggacatgactatgagatcacctgtgctgccatttgtgctgagcttggcctggtaata
agtggttcaaaagaaggaccatgtcttatacattctatgaatggagatctactgaggacg
ttagaaggtcatgaaagattacaaggtcccgaaagctgcttgagaccaaaacttattcaa
gcttccagagaaggccactgtgtcatatattatgaaaatggcctcttctgtgtgttcagt
gtgaatgggagactgcaggccactatggaaacagatgacaagataagggccattcagctg
agtcgggatggacagtatctgctcacaggtggagacaatggggttgtcatggtctggcag
gtgtgggacctcaaacggctctttgcttacccagggtgcgatgctggaatccgatccatg
gccctgtcctatgaccaaaggtgcataatgactggaatggcgtccgggagcatcgtggtt
ttttacaatgatttcaatcgctggcaccacgagtaccaaaccaggtactga
DBGET
integrated database retrieval system
