Parus major (Great Tit): 107202944 Help Entry 107202944         CDS       T04864                                  Symbol SYNPO2 Name (RefSeq) synaptopodin-2 isoform X1   KO K24066   synaptopodin-2 Organism pmaj  Parus major (Great Tit) Pathway pmaj04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:pmaj00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     107202944 (SYNPO2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:pmaj04990]     107202944 (SYNPO2) Domain-containing proteins not elsewhere classified [BR:pmaj04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    107202944 (SYNPO2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PDZ PDZ_6 Calsarcin PDZ_2 Motif Other DBs NCBI-GeneID:  107202944 NCBI-ProteinID:  XP_015479517 Ensembl:  ENSPMJG00000007324 LinkDB All DBs Position 4:4503446..4581035 Genome browser AA seq 1271 aa AA seqDB search MLPNCTRKMGTGDYLCIAMSGGAPWGFRLQGGKEQKQPLQIAKVRSKSKAAKAGLCEGDE VVSINGKPCGDLTYAEVIVLMESLTDVLQMLIKRPSSGINETLSTERENGKHENVKIEDY RENTTLQMNTAQEIPHGDLCITEIYSGTHHGAAESNTHFSETKQETPQSQRIAPKVIGTP KVIVTDEAAVRETTEERPGAMVELQFSLSNDVHKATSAPAVTLLGAEKCPPSGRGPSATH DGSSSLIAVPLGVKEGNIQWSNKVVHFSSSKEVKRIQGAAPSIPRVEVILDCSDREKEAP RSQSERGCVDSQVEGGQSEAPPSLLSFAISPEVTVQGEDSKHSEKEHRPLKHRARHARLR RSESLSEKQVKEAKSKCKSIALLLTAAPNPNSKGVLMFKKRRQRARKYTLVSYGTGELER DEDEGEEGEGEEGDKENTFEVSLLATSESEIDEDFFSDIDKDGKIVTFDWDSGLLEVEKK TKSGEEMQTLADSTGKGALMFAKRRQRMDQITAEQEEMKASTVQTEEHRETTVTENFQKV SSSIYQSKEEEMSRQQTCVSKSYTDVSQNHSKVVQQNGFGLAPGTNLPFQSSGTQKAASL NKTAKPFPSGVQNRAAAPFSPVRNVTSPLSDAAAPPPYCSVSPPAEAFYRPVSAPVASKA APPAWAATEPTEHIASRDERIAVPAKRTGILQEAKRRSTSKPMFNFKDAPKVSPNPALLS LVHNAEGKKGTGAGFESGPEEDYLSLGAEACNFMQTQTSKQKAPPPVAPKPSLKVSPSAG TPVSPVWSPSAAASNKPPSFPAPSSPQAAYPAPPKSPQYPHSPVHPPSTLDLAGPFKGPQ ASLASPNLAPKATPVTPSAGETKPPFEMPPAMSGKGAQLFARRHSRMEKYVVDSETVQAN MARASSPTPSLPASWKYSPNVRAPPPVAYNPIHCPSYPPAATKPSSKAAAATKNTKRKPK KGLNALDIMKHQPYQLDPSLFTFQPPKESLAMKQTSKLSTSKQTLPLPTYLPPGPGSPTR ARPSSVYSVPAYGSQPSFPSNASLPGNESYSPTGYSAFSKPETTTSSLFTAPRPKFSAKK AGVTAQGRSSGRSLSLPGRPSSFIPRAMSPTSPLVFQPAPDYFSKPDTAADKPGKRLTPW EAAARSPLGLVDEAFGPQSMQESIAANVVSAARRKTLPEPPDEWKLKVSYEPPAPSGSVA LLGGKQSGVLSPQKSSLTAPSQAGPKLQYPYCTQRSTTDPDILSMDSRSDYCLSTADSNY NPQPRGWRRPT NT seq 3816 nt NT seq  +upstreamnt  +downstreamnt atgctgcccaactgcaccaggaaaatgggcacaggggattatctctgcattgctatgagc ggaggggcgccgtggggcttcaggctgcaagggggcaaggagcagaagcagcctttgcaa atcgccaaggttcgcagcaaaagcaaagcagccaaggctggactgtgtgagggggatgag gtggtgtctatcaatggcaagccctgtggagacctaacctatgctgaagtcattgttctg atggaaagcctgactgatgtcctgcagatgcttatcaagagaccctccagtggaataaat gaaaccttgagcactgaaagagaaaacgggaagcacgagaacgtaaaaattgaggactac agggagaacaccacactgcaaatgaacacagcgcaagagataccccatggagatttatgc atcacagagatttacagtgggactcaccacggagcagcagaaagcaacacacacttttct gaaacgaaacaagagaccccacaaagccagagaattgctcctaaagtgataggcaccccc aaagtgatcgtgacagatgaggctgctgtcagagagacgacagaagaaaggccgggtgcg atggttgagctgcagttttccctctcaaatgacgtgcacaaggccaccagtgctcctgct gtgactctcttgggggcagaaaagtgccccccttcaggcagaggacccagtgcaacacat gatgggagcagctccctcattgcagttcctctgggtgtaaaggagggcaacatccagtgg tcaaacaaagtagtccacttttctagcagcaaggaggtgaagaggatccaaggtgcagct ccatctatccccagggtggaggtgatcctggactgctcagacagggagaaggaagcgccc aggtctcagtctgaaagggggtgtgttgattctcaagtagaaggagggcagtcagaagca cctccttccctcctctcctttgcaatctcaccagaagtcacagtgcagggagaagacagc aagcactcggaaaaggaacacagacctctcaagcacagggcaaggcacgcaaggctccgg cgaagcgagagcctgtcggagaagcaggtcaaagaagccaaatctaaatgtaaaagtatt gcactgctgctgacagcagctcccaaccccaattccaagggggtgttgatgttcaagaag cgccgccaaagggcgaggaaatacactttagtcagctacgggactggggagttagaacgt gacgaggacgagggggaagagggtgaaggtgaagagggggacaaggaaaacacttttgag gtgagtttgcttgcaacgagtgagtcggaaatagatgaagattttttctctgacattgac aaggacggtaagatcgtgacgtttgactgggacagtggtctgctcgaggtggaaaagaag acaaaaagtggagaggagatgcagacgctcgcagacagcacagggaaaggggccctcatg tttgccaagaggaggcagaggatggatcagattacagcggagcaggaggagatgaaggca agcacagtgcagacagaggagcacagggaaaccaccgtgacagagaacttccagaaagta agctcttccatctatcaatcaaaagaggaggaaatgtcaaggcagcagacctgtgtgagc aaaagctacacagacgtgagccagaatcacagcaaagtggtacaacaaaatggctttggc ttagcacccggcacaaacctcccgtttcaatcctctggaacacaaaaggcagcatctttg aataaaacagcgaaacccttcccttctggagttcaaaaccgagcagctgcaccattttcc cctgtaagaaatgtcaccagtcccctttcggatgcagcagcaccgcctccttactgctct gtcagcccacctgctgaggctttctacagacctgtctcagctcctgtggccagcaaggct gccccgcccgcgtgggcagccaccgaacccacggaacacatcgcctccagggatgaaagg attgccgtgccggccaaaagaaccgggatactgcaggaggcaaagagaaggagcacttcc aaacctatgttcaacttcaaagacgcacccaaagtaagtcctaatccagccctgttgtcc cttgtacacaatgcagagggcaaaaaggggaccggagctggttttgagtcaggacctgaa gaagactacctcagtttgggagcagaagcttgcaatttcatgcagactcaaacatctaaa caaaaggcccctcctcctgttgctccaaagccttcactcaaggtgtctccttctgctggt actccagtttcaccagtttggtcaccttcagctgcggcttccaacaagcctccttctttc ccagcaccatcctcacctcaggcagcgtatcctgcaccacccaaatctccacagtatcct cattctcccgtccatcccccaagcactctcgaccttgccggtcctttcaaagggcctcag gccagcctggcgagtccaaaccttgcccccaaggcaacaccagtcaccccaagtgctgga gaaacaaagcctcccttcgagatgccaccagctatgagtgggaaaggagcacagctgttt gccaggaggcattcccgaatggagaagtacgtggtggattcagagactgtgcaggcaaac atggcacgagcctcatctccaactccatctttaccagcttcttggaaatattcacctaat gtccgagcacctccacccgtcgcttataatcccatccactgcccttcctaccctcctgct gctaccaagccttcctctaaggctgctgctgctaccaaaaacacaaaaagaaaacctaag aaaggcctcaacgctttggatattatgaaacatcaaccatatcaactcgatccatcttta tttaccttccaacctcctaaggaaagccttgccatgaagcagacatcgaagctgtccact tcaaagcaaacactgcctttacctacctaccttccacctggtcctggctctcctacaagg gcccggccttcgtcggtgtactccgtgccagcctacggttcccaaccttccttcccatca aacgcctctctcccaggaaatgaatcatactcacccacaggctactctgcgttttctaag ccagaaaccaccacatcctctttgtttactgctccgaggccaaaattttcagccaagaaa gctggcgtcactgcacagggaagaagtagtggccgctcattatcgcttcctgggagacct tcttcattcattcctcgagccatgtctccgacttctcctcttgtatttcagcccgcccct gactacttcagcaagccagacacagcagctgacaagcctggcaagagactgactccctgg gaagcagcagccagatctccccttggcctggtggatgaagcatttggtccccaaagcatg caggaatccattgctgctaacgtggtgtcggctgctcgcaggaaaacgcttcctgagcca ccagatgaatggaaacttaaagtttcttacgagcctccagcccccagtggtagcgtagcc ttactaggagggaagcagtcaggggttctatcaccccaaaaaagctccctgactgccccc agccaggctggccctaagctgcagtatccctactgcactcagcgctccacaacagatcct gatatattatccatggattccaggtctgactattgcttgtcaacagctgattcaaactac aacccacagccaaggggatggaggcgtccaacatga

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