Parus major (Great Tit): 107202945
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Entry
107202945 CDS
T04864
Symbol
SEC24D
Name
(RefSeq) protein transport protein Sec24D isoform X2
KO
K14007
protein transport protein SEC24
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107202945 (SEC24D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmaj04131
]
107202945 (SEC24D)
Membrane trafficking [BR:
pmaj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
107202945 (SEC24D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
107202945
NCBI-ProteinID:
XP_015479520
Ensembl:
ENSPMJG00000007297
LinkDB
All DBs
Position
4:complement(4447644..4489612)
Genome browser
AA seq
1034 aa
AA seq
DB search
MSQQGYVAAPPYSQSQPGIGGFGPPNSSIHYGHYGDPNSSYSAPQPGVSKSAVPFGSPAP
VGPPPPGAQHFSPNSFQNGSGTPGQQPQRFQGPPPPGNTGPSYPPYSHQSQAAFPNTAPA
SSTAQLADQLNSMQINNYGPGTAPSSSVSPGHRAAFQGPQVLPPAQQQMGLPPAPQLPPP
PANSVNGLCAQPALPPVARQGGIPGPVPPNPNLQHLPGQPPGPGYHPQQANYGPQMAAPQ
LSYPGAFPSGPAQLAGPPQKKLDPDSIPSPIQVIENDKAARGGQVYATNTRGQVPPLVTT
NCVIQDQGHASPRYIRCTTYCFPVTSDMAKQARIPLAAVIQPFAAVPPNETPLYLVNHGE
TGPIRCNRCKAYMCPFMQFIEGGRRYQCGFCNCINDVPQFFFQHLDHMGRRIDHYERPEL
SLGSYEYVATSDYCRDKKPPNPPAFIFMIDVSYRNIKSGLVKLICDELKTLLDKLPREEQ
EESSAIRVGFVAYNKVLHFFNVKSSLAQPQMMVVTDVAEVFVPLLDGFLVDFEESRSVVT
NLLDQIPELFADTNESETIFAPVIQAGMEALKAAECAGKLFLFHSSLPTAEAPGKLKNRD
DKKLLNTDKEKTLFQPQGNYEALAKDCVANGCCVNLFLFPTQYVDVASMGLVTMYTGGTL
YKYNNFQLDADSPQFLSDLRKDIQKKMGFDATMRVRTSTGFRATDFFGAIYMNNTTDVEM
AAVDCDKAVTVEFKHDDKLNEDTGALIQCAVLYTSLSGQRRIRIHNIGLNCSSQLADVYR
TCETDALINFFAKSAFKAILSQPLKTVRDILMNQTAHMLACYKKNCASPAAVSQLILPDT
MKVLPVYMNCLLKSCVLASRPEIPTDERAFHRQLVMAMGVADTQLFFYPLLLPLHSLDLK
SDAVPAAIRCSEERLSEGGAFLLANGLSMFLWLGASVSPELIQGLFNVPSFAHISTEATS
LPDLDNPFSKKLKHILEQIQSQKPHTMKLMVVKQREQPEMLFRQFLVEDKSIYGGASYVD
FLVCIHKEISQLLS
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacaaggttatgttgcagctcctccatattcccaatcccagccaggaatagga
ggttttggaccacctaattcttcaattcattatggacattatggggaccctaactcctca
tactcagcaccgcaaccaggtgtgtcaaaatctgctgtgccttttggatctccagctcct
gttgggcctccaccacctggagcacagcacttcagcccaaacagtttccagaatgggtct
ggtacaccaggacagcagccacagaggtttcaaggccctccacctccaggtaacacagga
ccttcctatcctccctacagtcatcagtcccaagcagccttcccaaatactgcacctgct
tcctctacagcacaacttgctgaccagctcaacagcatgcagataaataactatggtcct
ggcactgctccgagctcctccgtgtctcctgggcatcgggcagcattccagggcccgcaa
gtgctgcccccagcccagcagcagatgggtttgccacctgcaccacagctgcctcctcca
ccagcaaatagtgttaatggcctttgtgctcagccagcattgcctcctgtggccaggcag
ggtggaattcctggccctgtccctccaaatcctaacttgcaacaccttccaggacagcct
ccagggcctggatatcatcctcagcaagcaaactatggtcctcagatggcagcacctcag
ctgtcgtatcctggtgcttttcccagtggtccagcacagctcgcaggcccaccacagaag
aagcttgatcctgattctattccaagcccaattcaagtaattgagaacgataaggctgcc
aggggagggcaggtctatgccacaaacacaagaggacaggttcctcccctcgtcaccacc
aactgtgtgatccaggaccaaggccacgccagcccccgttacatccgctgtacgacctac
tgcttcccagtgacctcagacatggccaagcaggcccgcatccccctggcagctgtcatc
cagcccttcgctgctgttccaccaaacgagacacctctttatcttgtaaaccatggggag
accggccccatccggtgcaaccgctgcaaagcttacatgtgtcccttcatgcagttcatt
gaaggtggcaggaggtaccagtgtggattttgtaactgtataaatgatgtcccccagttc
ttctttcaacacctggaccacatgggccgaaggatagaccactatgagaggcctgagctg
tccctggggtcttacgagtacgtggctacctcggattattgccgagacaagaagcctcct
aatccaccggcttttatcttcatgattgatgtttcatacagaaacataaagagtggccta
gtgaaactcatatgtgatgaactgaagactctgctagataaacttccaagagaagagcaa
gaagaatcctcagcaattcgagttggttttgtcgcttataacaaggtccttcacttcttc
aatgtaaaaagcagcttagctcagcctcagatgatggtggtcacggatgtggctgaagtt
tttgttcctctgctggatggtttccttgtggactttgaggaatcccgatcagttgttacc
aacttgttggaccagattccagagttgtttgcagacactaatgagagtgagaccatcttt
gctcctgttatccaggctggcatggaggcactaaaggctgcagaatgtgctgggaaattg
ttcctcttccactcttctctgccaactgcggaagcaccagggaagctgaaaaacagggat
gacaagaaattgctcaacacagataaggaaaagaccctcttccagccacaaggaaattat
gaggccttagccaaggattgtgtggctaatggctgctgtgtgaatttattcctcttccca
actcagtatgtggatgtagcctccatgggccttgtcacaatgtacactggtggaacacta
tacaagtataacaatttccagctcgatgctgacagcccccagttcttaagtgatctcagg
aaggatatccaaaaaaagatgggatttgatgcaacaatgagggttcggacaagtacaggc
ttcagggctacagacttctttggggccatttacatgaacaacaccacggatgtggagatg
gcagcggttgactgtgacaaagcagtgacagtggagttcaaacatgatgacaaactgaat
gaagacactggggccttaattcagtgtgctgtcctgtacacatcgctgagcgggcagagg
cgaatccgcatacacaacataggtttgaattgcagctcccagttagctgatgtctacagg
acttgtgagactgatgcacttatcaacttctttgctaagtcagcttttaaagccattctg
agccagcccctgaagacagtcagggatatcctgatgaatcagactgctcacatgctggcc
tgctacaagaagaactgtgccagcccagcagctgtcagccagctgatcctgccagacacg
atgaaggtgctgcctgtgtacatgaactgcctgttgaagagctgtgtgctggccagcagg
cccgaaatcccaaccgatgagagagctttccaccgccagctggtcatggccatgggggtg
gccgacacacagctcttcttctaccccctgctgctgccacttcacagcctggatctgaag
agtgacgctgtcccagctgccatccgctgctccgaggagcgcctctccgagggaggggcc
ttcctgctggccaacgggctgagcatgttcctgtggctgggagccagcgtgtccccagag
ctcatccaggggcttttcaacgtgccgtccttcgcacacatcagcaccgaggccacatcc
ctgcctgacctggacaatccattttctaagaaactgaagcatattctggagcaaatccag
agccaaaagccccacactatgaagctgatggtagtgaagcagcgggagcagccagagatg
cttttccgccagttcctagtagaagacaagagtatttatggaggagcctcgtacgtggat
ttcctcgtgtgcattcacaaagagatcagccagctgctcagctaa
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