Parus major (Great Tit): 107202959
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Entry
107202959 CDS
T04864
Symbol
CLOCK
Name
(RefSeq) circadian locomoter output cycles protein kaput isoform X1
KO
K02223
circadian locomoter output cycles kaput protein [EC:
2.3.1.48
]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaj03000
]
107202959 (CLOCK)
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107202959 (CLOCK)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
107202959 (CLOCK)
Transcription factors [BR:
pmaj03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107202959 (CLOCK)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
107202959 (CLOCK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
DUF6080
Motif
Other DBs
NCBI-GeneID:
107202959
NCBI-ProteinID:
XP_015479552
Ensembl:
ENSPMJG00000006320
LinkDB
All DBs
Position
4:41949952..42015447
Genome browser
AA seq
859 aa
AA seq
DB search
MFFTISTHKMSSIADRNDGSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSM
LPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEALDG
FFLAIMTDGNIIYVSESITPLLEHLPSDLVDQSVFNFIPEGEHSEIYKILSSHLLESDSL
TPEYLKSKNQLEFCCHMLRGTIDPKEQPTYEYVKFIGNFKCLNHVPNSAHNGFEGTIQRS
HRPSYEEKVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYL
PFEVLGTSGYDYYHVDDLDNLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYH
QWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPEITADKSQDSGSDNHINTVSLKEA
LERFDTSPTPSASSRSSRKSSHTAVSDHSSTPTKMTVDTSTPPRQGLSGHEKTAQRRSSL
SSQSLSSQSLGQPVTQPAISQPATLQLQSGMTQPVFQFSAQLGAMQHLKDQLEQRTRMIE
ANIHRQQEELRKIQEQLQIVHGQGLQMFLQQSASGLNFGSVQLPSGNSSTVQQLTPINMQ
GQVVQTNQTQSGMNTGHINTPHMIQQQQPLQSTATQHNQQNVLSGHNQQSSLASQSQNTV
SAPLYNTMVISQPTAGNVVQVPSSLSQNNNQNAAAVTTFTQDRQIRFSQGQQLVTKLVTA
PVACGAVMVPSTMFMGQVVTAYPTFAAQQQQTQTLSITQQQQQQQQQQQQQQSQQDHQQQ
LTTVQQPAQSQLTQHPQQFLQTSRLLHGNQSAQLILSAAFPLQQSTFTQSHHQQHQSQQQ
QLSRHRTDKMTDPSKVQPQ
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgttttttaccataagcacccataaaatgagctccattgcagacagaaatgacggaagc
atttttgatgggctggtggaagaagatgacaaagataaagcaaaaagagtgtctagaaac
aagtccgaaaagaaacgtcgagatcagtttaatgtgcttatcaaagagttgggttccatg
cttccaggtaatgctcggaagatggataaatccactgtgctgcagaagagcattgacttt
ttacggaagcacaaagaaattactgcacaatcagatgccagtgaaattcgtcaggactgg
aaaccgacattccttagtaacgaagagttcacacagttaatgttagaggctcttgatggt
ttttttttagcaattatgacagatggaaatataatatatgtgtctgaaagtataactccc
ttacttgaacatttgccatctgatcttgtggatcagagtgtatttaattttatcccagag
ggggaacattcagaaatttataaaatattgtcttctcatctgctggaaagtgattccttg
acaccggaatacttaaaatcaaaaaatcagctagaattctgttgccatatgctgcgagga
acaatagatccaaaagagcaacctacatatgaatatgtaaaatttataggaaatttcaaa
tgtttgaatcatgttcccaactcagcgcacaatggttttgaaggaactattcagagatca
caccggccttcatatgaagagaaagtttgctttgtagccacagttagattagctacacct
caatttatcaaggaaatgtgcactgttgaagaacccaatgaagagttcacatctaggcac
agcttagaatggaagttcctattcttggatcacagggcacctcccataataggttatctt
ccatttgaagttttgggaacatcaggctatgattattatcatgtggatgatctagataat
ctggcaaaatgtcatgagcatttaatgcaatatgggaaagggaagtcatgttactacaga
ttccttacaaagggacaacagtggatttggctgcaaactcattactatatcacgtatcac
cagtggaattccaggccagagtttattgtctgtacgcacactgttgtaagttatgcagaa
gttagagcagaaagacgacgagaacttggtattgaggaatctcttccagagataacagca
gataagagtcaggactctgggtctgacaatcacataaacacagtgagtctcaaagaagca
ctggaaaggtttgataccagccccacaccttctgcttcctccaggagttcgagaaaatct
tcacatactgcagtatcggatcattcatcaacaccaactaaaatgacagtggacactagc
actcctccaaggcaaggcttatctggtcatgaaaagactgcgcaaagaagatcatctctg
agcagtcagtctttaagctcacagtctcttggacaaccagtaacacagccagcaatatct
cagcctgcaactctgcagctccagtctggaatgactcagcctgtgtttcagttttcagct
cagttaggagctatgcaacatcttaaggaccagctagagcaaagaacacgcatgatagag
gcaaatattcatcggcagcaggaagagttgcgtaagattcaagagcagcttcaaattgtt
catggtcaaggactccagatgttcttgcagcagtcagcttctggactcaactttggttct
gtgcagcttccttctggaaattcttcaactgttcagcagcttacaccaataaacatgcaa
ggtcaagttgttcagactaatcagactcaaagtgggatgaacacaggccatataaatact
ccacacatgatacagcagcagcagcctttgcagagtactgcaacacagcataatcaacaa
aatgtgcttagtggacacaatcagcagtcttctcttgccagccagtcacagaacacagtc
tcggcacctttgtacaacactatggtgatttctcagccaacagcaggaaatgtggtgcag
gttccctctagcttatcacagaacaacaaccagaatgctgctgcagtaaccacttttaca
caggacagacaaatcagattttctcaaggtcagcaacttgtaacaaaacttgtcacggcc
ccagtagcatgtggagcggtaatggtaccaagtactatgtttatgggacaggtggtgaca
gcttatcccacttttgctgcccaacagcagcagacacagactttgtcaataacacaacaa
cagcaacagcagcagcagcagcagcaacaacagcaaagtcagcaggaccatcagcagcag
ctcaccacagtacaacagccagctcagtcacagctgacccagcaccctcagcagttccta
cagacatccaggttacttcatggaaatcagtcggctcagcttattctctctgctgctttc
ccactacaacaaagcactttcactcagtcccaccaccagcagcatcagtctcagcagcag
cagctgtcacgacacagaactgacaagatgactgatccttccaaagttcagccacagtag
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