Parus major (Great Tit): 107203033
Help
Entry
107203033 CDS
T04864
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X2
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107203033 (SMARCAD1)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107203033 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
HDA2-3
CUE
HHH_3
Motif
Other DBs
NCBI-GeneID:
107203033
NCBI-ProteinID:
XP_015479790
Ensembl:
ENSPMJG00000009360
LinkDB
All DBs
Position
4:18025839..18067167
Genome browser
AA seq
1096 aa
AA seq
DB search
MSLYNLDRFRFERKGKGAEQESPSPPAAWAEAPDGAAAVGAAGGDEEEGAGDSKRPDTPD
SDVTERTEYSTIPETPESQRTMKESYFRRQRGVQFLDVSDSEEEPRNFGAAKETQASRGE
VAVISETSDNDEQPEEEMPQLALVNGGEQRPAVKEDAEEDTRDSKLQTMKERFPQRSDQE
LLKLIESACTMDEAVAAGLKINNKAASGKRKLSESPTNCKTKNERVAKKSKASYLDDSEP
KRQWERQEMLVKKLQGTFPGLDKEELREVLEEHNWVFHDALEALKIFADDEEGVEFPPKR
KVADLTEASTESHSEESKDKTKQKASEKEQNGFQKKDKGKRSIWRAERETEHTEDESASE
DGGSSLDEDYSSADEVMEDGYKAKILSFLQDASLSELTLIPQCSQKKAQKIIALRPFNSW
DALFAKMTKTSGLSEDIVWNCKILLKERDVVLKLMNKCEDISNKLTKQVTRITRDGEYGW
NIEQPAILNRSLKLKPYQKIGLNWLALLYKHGLNGILADEMGLGKTIQAIAFLAYLYQEG
NRGPHLIVVPASTLDNWIREVHLWCPELNVLFYYGSQEDRKHLRVDIHNKVVDFNVIVTT
YNSAISSSDDRGLFRRLKLNYAIFDEGHMLKNMSSVRYQHLMTINAKNRLLLTGTPVQNN
LLELMSLLNFVMPHMFSSSTSEIRRMFSSKTSAEEQSIYEKERIAHAKQIIKPFILRRVK
DEVLKQLPPKKDLIELCAMSEKQEQLYLALLNKLKKTINSNEKNSDMGNAMMQLRKMANH
PLLHRQYYTNEKLRTMSTLMLKEPTHRDANPDLIFEDMTVMTDFELHVLCRQYSHINDFM
LDMDQILDSGKFKALEHILSDLKEKGDRVVLFSQFTMMLDILEVFLKHWQHRYIRLDGKT
QISERIHLIDEFNTDMGIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCH
RVGQTREVQVIKLISKGTIEETMLKISQQKLKLEQDMTAAESGRCLAHNDVHLSKLKLQY
VTLRKRRFLMQTSLVLFGSFYAKLERCIFAGCSLIHRKCPLYLSQKSVTKSYKQRIFLLF
RGCRLLSVYVKYFKLY
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgagcctctacaatttggaccggttccgcttcgagaggaaggggaagggcgcggagcag
gagtcgccgtccccgccggcggcctgggcagaggcacctgacggtgctgccgcggtcggt
gccgctggaggggatgaggaggaaggtgcgggtgacagtaagaggccagacactccggat
tcggacgtgacagagagaactgagtattccaccatcccagaaactcctgaatctcagagg
acaatgaaagagtcttacttcaggcgccagcgaggggtgcagttccttgatgtgtctgac
agtgaggaggagccaagaaacttcggtgctgccaaagaaacccaggcttcgaggggagag
gtggccgtaatctctgaaacatctgataacgatgaacagcctgaagaggaaatgccccag
ctggcacttgtaaatggtggggagcagcggccagctgtgaaggaggatgcagaggaagat
accagagactcaaagctgcaaactatgaaggaacgttttccccaaagaagtgaccaagaa
ttattaaaactgatagagtcagcatgcacaatggatgaagcagtagctgctggtttgaag
atcaataacaaagctgcctctggtaaaaggaaactaagtgaatctcccacaaattgcaaa
accaaaaatgagcgagttgcaaaaaagtcaaaagctagttatctggatgactcagagccc
aaaagacaatgggagaggcaagagatgcttgtgaagaagttgcaaggtacattccctgga
ttagataaggaggagctgagagaagtacttgaggaacataactgggtgtttcatgatgca
ctggaagccctgaaaatatttgcagacgatgaggaaggtgtggaatttcctcccaaaagg
aaagttgctgacttgaccgaagcttccactgagagccatagtgaggagagtaaagataag
acaaagcagaaagcttctgagaaagagcagaatggctttcagaaaaaggacaaaggcaaa
aggagcatttggagggctgaaagagaaacagaacacacggaggatgagtctgcttccgaa
gatggcggaagctccctggatgaggactacagcagtgctgatgaagtcatggaggatggc
tacaaagcgaaaatcctcagcttcctgcaggatgcttccctgagtgaactgactctgatt
ccccagtgttctcagaaaaaggctcagaagataatagcgctccggccctttaacagctgg
gacgctctgtttgcaaaaatgacaaagacttctggtttgtcagaagatatagtgtggaac
tgcaagatactgctgaaggagagggatgtggttctaaagcttatgaataaatgtgaagac
atttccaataaactgacaaaacaggtaaccaggattactagagacggagaatatggatgg
aacatagagcaacccgccattctgaatcgcagtttgaaactgaagccatatcagaagatt
ggtttgaactggttagcactgctgtataaacatggattgaatggcatcttggctgatgaa
atgggcttaggaaaaacaattcaagctattgcatttctggcttatctctaccaagagggc
aatagaggtccccatttgatagttgtgccagcttcaacattagataactggataagagaa
gttcatctgtggtgtcctgaactgaacgtcctcttttactatggatcccaagaagatagg
aaacatctcagggtggacattcataataaagtcgttgatttcaatgtgattgtgactaca
tacaactctgcaatcagcagctcagatgatcgaggactgttccgcaggctgaagcttaac
tatgcaatttttgatgaaggtcatatgctgaagaacatgagctctgtccgctaccagcac
ctcatgacaattaatgccaagaatcgcttgctgctaacagggactccagttcaaaataat
ctgttggaattgatgtccctcttgaattttgtcatgccccatatgttcagcagtagcaca
agtgaaattcgaaggatgttctcttcaaaaacaagtgctgaagaacaaagtatatatgag
aaggagagaattgcacatgcaaaacagataataaaaccattcatcttgagaagagtaaaa
gatgaggtccttaaacaactacctcccaaaaaagatctcattgaactgtgtgccatgtca
gagaaacaggaacaactctacttggctctcttaaacaaactcaagaaaactattaacagt
aatgagaagaactctgatatgggaaatgcaatgatgcaacttagaaaaatggccaatcac
cctcttttgcatcgtcaatattacacgaatgaaaagctcaggacgatgtccaccctcatg
ctcaaggaacccacacatcgtgatgctaaccctgaccttatctttgaagatatgacagta
atgacagattttgagctgcatgtgctttgtaggcaatattctcacatcaatgacttcatg
ttggacatggatcagatcctggattctggaaagtttaaagcactggaacacattctctcc
gaccttaaagagaagggtgacagagttgtgttgtttagccagttcactatgatgctggac
atcttggaagttttcctaaaacactggcaacatagatacattaggctggatggaaaaacg
cagatttctgagcggatacatctgatagatgagttcaatactgatatgggtatatttgta
ttccttctgtccaccaaagctggtggcttgggcattaatctgacctcggccaatgttgtt
atccttcatgacattgactgcaacccttacaacgataagcaggcagaagaccggtgccac
agagtaggtcagacacgagaagtacaagttataaaacttatcagtaagggcactattgaa
gaaaccatgctcaaaatcagccaacagaaattgaagttagaacaagatatgactgcagca
gaatcaggtaggtgtcttgcacataacgatgtccatttaagtaagctgaagctgcagtat
gttactctgagaaaaagaaggttcttgatgcagacaagtcttgtgttgtttggaagtttt
tatgctaaactagaaagatgtatttttgctggctgttctttgattcacaggaaatgccct
ctgtatctgagccaaaaatcagtgaccaagtcctacaagcagaggatttttttactgttt
aggggatgcaggcttttatctgtttatgtgaaatattttaagctgtactaa
DBGET
integrated database retrieval system
