Parus major (Great Tit): 107203053
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Entry
107203053 CDS
T04864
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107203053 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmaj03041
]
107203053 (DHX15)
03009 Ribosome biogenesis [BR:
pmaj03009
]
107203053 (DHX15)
Enzymes [BR:
pmaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107203053 (DHX15)
Spliceosome [BR:
pmaj03041
]
Complex A
U2 snRNP components
U2 related factors
107203053 (DHX15)
Complex B
107203053 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
107203053 (DHX15)
Ribosome biogenesis [BR:
pmaj03009
]
Eukaryotic type
90S particles
Helicases
107203053 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Atrophin-1
Flavi_DEAD
AAA_25
AAA_29
Apis_Csd
Motif
Other DBs
NCBI-GeneID:
107203053
NCBI-ProteinID:
XP_015479865
Ensembl:
ENSPMJG00000016312
LinkDB
All DBs
Position
4:51114156..51158591
Genome browser
AA seq
765 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRTTDGKDRDRDRDRDDRSKDRDRDRDRDRDRDRERDKEKDLR
PSSNSTYYAAAGLPAIKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDIL
IRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMD
VMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD
ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERD
YLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYS
TLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPR
IRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSV
VLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQ
LAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNV
YHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR
KALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTC
TDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccatcgcctcgatctgggcgacgattacagctccagcaagaaacgcacc
accgacgggaaagatcgggaccgggacagggaccgagatgaccgttcaaaagaccgtgac
agggatcgtgacagagatagagatcgtgacagagaaagggacaaggaaaaagatctgcga
ccttcgtctaactcgacatattacgcagctgctgggttaccagctataaaaccagcaatg
attccacacagtattaaccctttcacaaatctaccacataccccacgatattacgatatc
ctgaaaaaaaggctacaacttcctgtctgggaatataaagaaagatttacagatattttg
atcaggcatcagtcatttgtgctggttggagagactgggtctggtaaaacaacacagatc
cctcaatggtgtgttgactacatgcgctcgttacctggcccaaagaggggagtcgcgtgt
acccagccccggcgagtggctgcaatgagcgtggcacagcgtgttgctgatgagatggat
gtcatgctgggccaggaggttggttactccattcggtttgaagactgcagtagcgcaaaa
accattttgaagtatatgactgatggtatgttacttcgtgaagcaatgaatgatcctttg
ctggagcgctatggcgttataattcttgatgaggcccatgagagaacactggctacagat
atcttgatgggagttttgaaggaagttgtaagacaaagatctgatttgaaggttatagtt
atgagtgctacgttagatgctggcaagtttcagatctattttgataactgtcctcttcta
actatcccgggtcgcacccatcctgtggagatattctatactccagaacctgaaagggac
taccttgaggctgccattcgaacagtaatacaaattcacatgtgtgaagaagaagaagga
gatctcttactctttcttactggacaagaggagattgatgaagcctgcaagaggataaaa
cgtgaaattgatgacttaggtcctgaagttggtgacataaaaatcattccattatattcc
acccttcctccacagcaacaacagaggatatttgaacctcccccaccaaaaaaacaaaat
ggagcaataggaagaaaggttgtcgtgtccactaacattgctgagacatcattgacaata
gatggtgtagtgtttgtgattgatcctggctttgcaaaacagaaggtgtacaatcctcgt
atcagggtggagtctctgttggtgactgcgatcagtaaagcatctgcccagcagcgagct
ggccgtgctggtcgtactcgaccaggcaagtgcttcagactttatacagagaaagcctac
aaaactgaaatgcaggacaacacataccctgaaattttgaggtctaacttaggatctgta
gtattacagctcaagaagcttggtatagatgatttggtgcactttgattttatggatcct
ccagctcccgaaactctgatgagagctttagagcttttgaattatctggctgctttaaat
gatgatggagacttgactgaattgggatccatgatggctgaatttccattggatccacag
ctggctaaaatggttattgcaagctgtgactacaactgttctaatgaggtcctatctatt
actgccatgttgtcagtcccacagtgttttgttcgccccacggaagcaaagaaagcagca
gatgaagccaagatgaggtttgcccacatagatggagatcatttgacgttgctgaatgtc
taccatgctttcaagcaaaatcatgagtcggttcagtggtgttatgacaacttcattaac
tacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggataga
tttaatttgcctcgtagaagcacagattttaccagccgagactattacatcaacataaga
aaggcattagttactgggtatttcatgcaggtggcacatttggagcgaacagggcattac
ttaacagtgaaagataaccaggtggtgcagttgcatccctccactgttcttgatcacaaa
ccagaatgggtgctgtataacgaatttgtccttacaacaaagaattacatccggacatgt
acagacatcaagcctgaatggctggtgaaaattgcccctcaatattatgacatgagcaat
tttccacagtgcgaagcaaagagacagttggatcgcatcattgccaaacttcagtccaag
gaatactcacagtactga
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