Parus major (Great Tit): 107203055
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Entry
107203055 CDS
T04864
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107203055 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107203055 (FIP1L1)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107203055 (FIP1L1)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
107203055
NCBI-ProteinID:
XP_015479872
Ensembl:
ENSPMJG00000006423
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Position
4:complement(42664105..42702565)
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AA seq
581 aa
AA seq
DB search
MSTGEAERLSADADGAAGDEEEEWLYGDENETERPEEEKSGAPPPPGSEEEAAENGVVKT
KTAEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQFSYGAAPVNLNIKAGGRAYGSSGAKVK
GLDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRM
GLEILPVTSTTNKITAEDKAMEVRPSAEILDGRYHLFKVQQGRTGNLEKELAVQSTKPDF
TSPPALFKSGIPANRRISGTIDVIGQTITISRVEGRRRANENSNIQVLSERSNPEVDSFT
KPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGGPPPSLI
PTIDSGHSSGYDGRSVRAFSYGSDDEVELKTNDLLKVRKASKADKQKGRSPQYFTFPHPA
GSAPSWSSLLDTSKQWDYYARREKDRERERERSRDRDRDRDRDRDRDRTRDRERDRDHSP
SSSAFNSDEERYRYRDYAERGYDRHRTSREKEDRHRDRRHREKEESRHKSSRSNSRRRHD
SEEGDSHRRHKHKKSKRSKEGKEASGEPAPEQENTEAAPVE
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccggcgaggcggagcggctgtcggcggacgccgatggggccgccggggacgag
gaggaggagtggctctatggcgatgaaaatgaaacagagagaccagaggaagaaaaatct
ggtgctccacccccacctggaagtgaagaggaagctgcagaaaatggagttgtgaaaacg
aagacggcagaggccgaggatgacagtgatagtgatagtgatgatgacgaagatgatgtt
caagtcaccataggggatattaagacaggagcgccacagtttagttatggagcagcacct
gtgaatctcaatattaaggcaggaggacgagcttatggatcttctggtgcaaaagttaaa
ggactggatctagatgcaccagggagtattaatggtgtgccacttctggaagtagattta
gattcttttgaagataaaccttggagaaagccaggggctgatctctccgattattttaac
tatggcttcaatgaggatacctggaaagcttactgtgaaaaacaaaagagaatacgaatg
ggtcttgaaattttgccagttacctcaaccacaaataaaattacggctgaagacaaagct
atggaagtaagaccaagtgcagagattctcgatggcagataccatctttttaaggtacag
cagggcagaactggaaatttggagaaagagttggcagtgcagtcgaccaaacctgatttc
acatctcctcctgccttattcaaatcaggaattccagcaaacaggcggatatctggcaca
atagatgtgattggacagaccatcactatcagcagggtggaaggacgacggcgtgctaat
gaaaacagcaacatacaggttctttcagagcgctctaatcctgaagtagacagctttacc
aagccacctccatttttccctccaggagccccacccactcaccttccaccacctcctttc
ctcccaccccctccaactgtcagtactgctccacctctgattcccccaccaggtatacca
ataacagtgccaccaccaggttttccaccaccacctggcggtcctccaccttccctcata
cccacaatagacagtggacattcttctggctatgatggtcgttccgttcgtgcattttca
tatggcagtgatgatgaagtggagctcaaaacaaacgatttattgaaagttaggaaagct
agcaaggcagataagcagaaagggagaagtcctcagtacttcacctttccacaccctgca
ggttctgcaccctcatggtctagtcttctggacaccagcaaacagtgggattactatgca
cgaagagagaaggacagggaacgtgagagagagagatcccgagatcgggatcgtgaccgg
gaccgagacagggatcgagaccgtaccagagacagggaaagggaccgagatcacagtccg
tcttcaagtgcgttcaacagtgatgaagaacgctacagatacagagactacgcagagagg
ggctatgaccgccataggacaagtagagagaaagaagacagacacagagacaggagacac
agagagaaagaagagagtcgacacaagtcatctcgaagtaacagcagacgtcgtcatgac
agtgaagaaggggatagccacagaaggcacaaacacaagaagtccaaaagaagcaaagaa
ggaaaagaagccagtggtgaacctgctcctgaacaggaaaacactgaagctgcccctgtg
gaatag
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